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DETAIL

Detail for ZS11_C05G57270.t1

Genome:
ZS11: ZS11_C05G57270.t1
ZS11_v0: BnaC05T0489200ZS
WE: WE_A05G39690.t1
WE_v0: BnaC05T0474600WE
Darmor: C05p56790.1_BnaDAR
BH: BnaA05T351500BH
Quinta: BnaC05T0428500QU
ZS2: BnaA05T323800ZS2
SW: BnaA05T361900SW
Express61: C05p040390.1_BnaEXP
Xiaoyun: BnaA05G0341000XY
P202: BnaC05G048810P202.1
BL: BnaA05T351500BH
TA: BnaA05T324700TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaA05T347900RB
No2127: BnaA05T0349200NO
P130: BnaC05G058470P130.1
Length: 562
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 739.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity),GO:0052716(hydroquinone:oxygen oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_022558504.1
NR E-value: Not available
NR Score: 1169.5
NR Annotation: XP_022558504.1 laccase-22-like [Brassica napus]
SwissProt Protein: Q0IQU1|LAC22_ORYSJ
SwissProt E-value: Not available
SwissProt Score: 766.0
SwissProt Annotation: Laccase-22 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC22 PE=2 SV=2
CDS Sequence (1713 bp)
ATGAGAGAAATGACTTTTTCTTGTGCTAGAAATTTTCTGCTTGTGTTTCTCTCTCTGCGATATTTGGCTG
AGGCAAACATTCGTCACTACAAGTTCAATGTAGTGATGAAGAACATGACCAAGCTCTGTTCAACCAAACC
AATAGTTACCATAAATGGAAAGTTCCCTGGACCAACTCTATACGCTAGAGAAGACGATAATGTGATTGTT
AACCTCACCAACAACGTCAGTTACAACGTCACCATCCACTGGCATGGTGTGAAACAGCTAAGGACAGGAT
GGTCCGATGGCCCAGCTTATATAACGCAATGTCCGGTCCAACCAGGAGGAACTTTTGTATACAATTTCAC
GCTCACGGGACAACGAGGAACGCTTCTATGGCATGCTCATATCTCGTGGCTTAGGGCCACGGTCCACGGT
GCTATAGTCATACTTCCGAAACGCGGTGTACCTTACCCGTTTCCTCGGCCTCATACCGATAAAATCATCG
TTTTCGGTGAATGGTGGAAATCAGATGTGGAAGATGTGATTAAACAATCAACACAATCCGGTTTACCACC
AAATCTCTCAGACGCTCACACCATTAACGGACTAACCGGTCCAATCACCGGTTGCAACAACTCTCATGGA
TACACAATACACGTTGAAACCGGCAAGAGCTACCTCTTAAGGATCATAAACGCTGCAGTGAACGACGAGC
TCTTCTTCAAGATCGCACAACACAACTTAACCGTCGTTGAAGTGGACGCATCTTACACTAAACCGTTTAA
TACCGAAACGCTTTTCTTAGGTCCAGGCCAAACAGCAAACGCAATCTTGACCGCTAATCATCCCACAGGA
AACTTCTTAATGACCATTTCTCCCTTCATGGACACCGTTGTCCCCGTTAATAACGCAACCGCTACCGCCT
TTTTGCGTTACAAAACAACCACAACACAATCCTTGACTTTGTCCAAGATTCCTCCAATAAACGCTACAAG
CATCGCTCAAAACTTCTCAGATGCTCTAAGAAGCCTAAACTCGCGCGATTATCCGACCAACGTTCCTTTA
AAGGTAGACCACTCGCTGTTCTTCGCTATAGGAGTTGGCGTAAACCCGTGTGCCACGTGCATTAACGGAA
CCAAGAACATTGCCGACATCAACAATGTTACCTTTGTGATGCCAACGATGGCTTTGCTTCAAGCGCATTA
TTTCAACAAAAGCAAAGGCGTTTTCACCGATGATTTTCCCGGGAGACCCTTGACGCCGTTTGACTACACC
GGCGGTAATAAGAGTATACCGTTGAGTAATCTTCAGACAAAGAACGGAACACAAGTCTATAGACTTGAGT
TTAACGCAACGGTACAAATTGTTATCCAAGGGACAAGTGTAATTGCACCAGAGAGCCATCCTACGCATCT
GCATGGATCAAACTTCTTCGTGGTTGGTAAGGGATTAGGGAACTTTGATCCGTTGATGGATCCTAAGAAG
TTTAACCTCGTTGATCCGGTGGAGAGGAACACTGTTAGTGTCCCTACTGCTGGATGGACAGCCATTCGGT
TTATAGCAGACAATCCAGGTGTTTGGTTCTTCCATTGTCACTTGGAAGTGCACACTTCTTGGGGACTCAA
AATGGCGTTTCTTGTGGAAGACGGCAAAGGTTCTAATGAAAAACTTCCACCGCCTCCAAGTGATCTTCCC
AAATGCTAA
Upstream Sequence
CTCAATAATGAAACCTAGAAAATTACTACACACACAGCCTTTATTTATAGATTCATAGATTCATAGATTC
GTCGTCACAACTTCAGTTCCAAGCAAAGGCTGATGAGAGAAATGACTTTTTCTTGTGCTAGAAATTTTCT
GCTTGTGTTTCTCTCTCTGCGATATTTGGCTGAGGCAAACATTCGTCACTACAAGTTCAATGTAGTGATG
AAGAACATGACCAAGCTCTGTTCAACCAAACCAATAGTTACCATAAATGGAAAGTTCCCTGGACCAACTC
TATACGCTAGAGAAGACGATAATGTGATTGTTAACCTCACCAACAACGTCAGTTACAACGTCACCATCCA
CTGGCATGGTGTGAAACAGCTAAGGACAGGATGGTCCGATGGCCCAGCTTATATAACGCAATGTCCGGTC
CAACCAGGAGGAACTTTTGTATACAATTTCACGCTCACGGGACAACGAGGAACGCTTCTATGGCATGCTC
ATATCTCGTGGCTTAGGGCCACGGTCCACGGTGCTATAGTCATACTTCCGAAACGCGGTGTACCTTACCC
GTTTCCTCGGCCTCATACCGATAAAATCATCGTTTTCGGTGAATGGTGGAAATCAGATGTGGAAGATGTG
ATTAAACAATCAACACAATCCGGTTTACCACCAAATCTCTCAGACGCTCACACCATTAACGGACTAACCG
GTCCAATCACCGGTTGCAACAACTCTCATGGATACACAATACACGTTGAAACCGGCAAGAGCTACCTCTT
AAGGATCATAAACGCTGCAGTGAACGACGAGCTCTTCTTCAAGATCGCACAACACAACTTAACCGTCGTT
GAAGTGGACGCATCTTACACTAAACCGTTTAATACCGAAACGCTTTTCTTAGGTCCAGGCCAAACAGCAA
ACGCAATCTTGACCGCTAATCATCCCACAGGAAACTTCTTAATGACCATTTCTCCCTTCATGGACACCGT
TGTCCCCGTTAATAACGCAACCGCTACCGCCTTTTTGCGTTACAAAACAACCACAACACAATCCTTGACT
TTGTCCAAGATTCCTCCAATAAACGCTACAAGCATCGCTCAAAACTTCTCAGATGCTCTAAGAAGCCTAA
ACTCGCGCGATTATCCGACCAACGTTCCTTTAAAGGTAGACCACTCGCTGTTCTTCGCTATAGGAGTTGG
CGTAAACCCGTGTGCCACGTGCATTAACGGAACCAAGAACATTGCCGACATCAACAATGTTACCTTTGTG
ATGCCAACGATGGCTTTGCTTCAAGCGCATTATTTCAACAAAAGCAAAGGCGTTTTCACCGATGATTTTC
CCGGGAGACCCTTGACGCCGTTTGACTACACCGGCGGTAATAAGAGTATACCGTTGAGTAATCTTCAGAC
AAAGAACGGAACACAAGTCTATAGACTTGAGTTTAACGCAACGGTACAAATTGTTATCCAAGGGACAAGT
GTAATTGCACCAGAGAGCCATCCTACGCATCTGCATGGATCAAACTTCTTCGTGGTTGGTAAGGGATTAG
GGAACTTTGATCCGTTGATGGATCCTAAGAAGTTTAACCTCGTTGATCCGGTGGAGAGGAACACTGTTAG
TGTCCCTACTGCTGGATGGACAGCCATTCGGTTTATAGCAGACAATCCAGGTGTTTGGTTCTTCCATTGT
CACTTGGAAGTGCACACTTCTTGGGGACTCAAAATGGCGTTTCTTGTGGAAGACGGCAAAGGTTCTAATG
AAAAACTTCCACCGCCTCCAAGTGATCTTCCCAAATGCTAAAAGAGATCTTCTTCACCTGTTGAGCTTTG
AGAAACGTTTGGTTTACTTGTACATTCAAGAAATAGTCAATAGCCTGAAAAGTTATAAGACTTTCTCAGG
TCTTTTGCATATTTTCTTTCTCTTTGTTCTTGTTAAGTTTGTACAAAAAAAAGTAACTTATGATTGGAAC
ATAATTGAAATTTCAAGATTTTTTTTAAT
Downstream Sequence
GTAAGTATTACAGATTTACGAGTCTTCTTGGAGAACAAGTAATCCACTACTAGCTTAATC
TTCTCTTTTATGAGACAGGTAGTGATGAAGAACATGACCAAGCTCTGTTCAACCAAACCA
ATAGTTACCATAAATGGAAAGTTCCCTGGACCAACTCTATACGCTAGAGAAGACGATAAT
GTGATTGTTAACCTCACCAACAACGTCAGTTACAACGTCACCATCCACTGGTAGGTACAA
CTCAAAAAGAGTGAGTGACTCCATGTATTCTAAGTTGTTTAAACAAATCTTTGACATATC
TCTCCATTTTGTCTTTTTTTGCAGGCATGGTGTGAAACAGCTAAGGACAGGATGGTCCGA
TGGCCCAGCTTATATAACGCAATGTCCGGTCCAACCAGGAGGAACTTTTGTATACAATTT
CACGCTCACGGGACAACGAGGAACGCTTCTATGGCATGCTCATATCTCGTGGCTTAGGGC
CACGGTCCACGGTGCTATAGTCATACTTCCGAAACGCGGTGTACCTTACCCGTTTCCTCG
GCCTCATACCGATAAAATCATCGTTTTCGGTTAGCTTTATATAGTTAGTTAGTTACTAGC
TAGCTGAGCATGAGATTTTGGGGACCTTATTCAAAATAAAATATTCACCTATTATTTAAT
ATTTTTATAAATGTCATAAACAACTTTTTTAAAGAAAAATCATAATTTTCATAGTATATT
GTTGATTTATATCTAAATCATAACAATATAAATTCatctaatatttttataattttataa
aatagaatttattttcactttttgttgttttcaatcaacttttATTTTGTGAGATGAATT
TTTCAGGTGAATGGTGGAAATCAGATGTGGAAGATGTGATTAAACAATCAACACAATCCG
GTTTACCACCAAATCTCTCAGACGCTCACACCATTAACGGACTAACCGGTCCAATCACCG
GTTGCAACAACTCTCATGGTATGTACTAGGCTGAACATTATGCTATTTGGTTTAATCCGG
TTTGGTTATTTTGGTTTGTTTGTAAACGATCGCCAGGATACACAATACACGTTGAAACCG
GCAAGAGCTACCTCTTAAGGATCATAAACGCTGCAGTGAACGACGAGCTCTTCTTCAAGA
TCGCACAACACAACTTAACCGTCGTTGAAGTGGACGCATCTTACACTAAACCGTTTAATA
CCGAAACGCTTTTCTTAGGTCCAGGCCAAACAGCAAACGCAATCTTGACCGCTAATCATC
CCACAGGAAACTTCTTAATGACCATTTCTCCCTTCATGGACACCGTTGTCCCCGTTAATA
ACGCAACCGCTACCGCCTTTTTGCGTTACAAAACAACCACAACACAATCCTTGACTTTGT
CCAAGATTCCTCCAATAAACGCTACAAGCATCGCTCAAAACTTCTCAGATGCTCTAAGAA
GCCTAAACTCGCGCGATTATCCGACCAACGTTCCTTTAAAGGTAGACCACTCGCTGTTCT
TCGCTATAGGAGTTGGCGTAAACCCGTGTGCCACGTGCATTAACGGAACCAAGAACATTG
CCGACATCAACAATGTTACCTTTGTGATGCCAACGATGGCTTTGCTTCAAGCGCATTATT
TCAACAAAAGCAAAGGCGTTTTCACCGATGATTTTCCCGGGAGACCCTTGACGCCGTTTG
ACTACACCGGCGGTAATAAGAGTATACCGTTGAGTAATCTTCAGACAAAGAACGGAACAC
AAGTCTATAGACTTGAGTTTAACGCAACGGTACAAATTGTTATCCAAGGGACAAGTGTAA
TTGCACCAGAGAGCCATCCTACGCATCTGCATGGATCAAACTTCTTCGTGGTTGGTAAGG
GATTAGGGAACTTTGATCCGTTGATGGATCCTAAGAAGTTTAACCTCGTTGATCCGGTGG
AGAGGAACACTGTTAGTGTCCCTACTGCTGGATGGACAGCCATTCGGTTTATAGCAGACA
ATCCAGGTAATAAATCTCGA
Pro Sequence
MREMTFSCARNFLLVFLSLRYLAEANIRHYKFNVVMKNMTKLCSTKPIVT
INGKFPGPTLYAREDDNVIVNLTNNVSYNVTIHWHGVKQLRTGWSDGPAY
ITQCPVQPGGTFVYNFTLTGQRGTLLWHAHISWLRATVHGAIVILPKRGV
PYPFPRPHTDKIIVFGEWWKSDVEDVIKQSTQSGLPPNLSDAHTINGLTG
PITGCNNSHGYTIHVETGKSYLLRIINAAVNDELFFKIAQHNLTVVEVDA
SYTKPFNTETLFLGPGQTANAILTANHPTGNFLMTISPFMDTVVPVNNAT
ATAFLRYKTTTTQSLTLSKIPPINATSIAQNFSDALRSLNSRDYPTNVPL
KVDHSLFFAIGVGVNPCATCINGTKNIADINNVTFVMPTMALLQAHYFNK
SKGVFTDDFPGRPLTPFDYTGGNKSIPLSNLQTKNGTQVYRLEFNATVQI
VIQGTSVIAPESHPTHLHGSNFFVVGKGLGNFDPLMDPKKFNLVDPVERN
TVSVPTAGWTAIRFIADNPGVWFFHCHLEVHTSWGLKMAFLVEDGKGSNE
KLPPPPSDLPKC
mRNA Sequence
CTCAATAATGAAACCTAGAAAATTACTACACACACAGCCTTTATTTATAGATTCATAGATTCATAGATTC
GTCGTCACAACTTCAGTTCCAAGCAAAGGCTGATGAGAGAAATGACTTTTTCTTGTGCTAGAAATTTTCT
GCTTGTGTTTCTCTCTCTGCGATATTTGGCTGAGGCAAACATTCGTCACTACAAGTTCAATGTAGTGATG
AAGAACATGACCAAGCTCTGTTCAACCAAACCAATAGTTACCATAAATGGAAAGTTCCCTGGACCAACTC
TATACGCTAGAGAAGACGATAATGTGATTGTTAACCTCACCAACAACGTCAGTTACAACGTCACCATCCA
CTGGCATGGTGTGAAACAGCTAAGGACAGGATGGTCCGATGGCCCAGCTTATATAACGCAATGTCCGGTC
CAACCAGGAGGAACTTTTGTATACAATTTCACGCTCACGGGACAACGAGGAACGCTTCTATGGCATGCTC
ATATCTCGTGGCTTAGGGCCACGGTCCACGGTGCTATAGTCATACTTCCGAAACGCGGTGTACCTTACCC
GTTTCCTCGGCCTCATACCGATAAAATCATCGTTTTCGGTGAATGGTGGAAATCAGATGTGGAAGATGTG
ATTAAACAATCAACACAATCCGGTTTACCACCAAATCTCTCAGACGCTCACACCATTAACGGACTAACCG
GTCCAATCACCGGTTGCAACAACTCTCATGGATACACAATACACGTTGAAACCGGCAAGAGCTACCTCTT
AAGGATCATAAACGCTGCAGTGAACGACGAGCTCTTCTTCAAGATCGCACAACACAACTTAACCGTCGTT
GAAGTGGACGCATCTTACACTAAACCGTTTAATACCGAAACGCTTTTCTTAGGTCCAGGCCAAACAGCAA
ACGCAATCTTGACCGCTAATCATCCCACAGGAAACTTCTTAATGACCATTTCTCCCTTCATGGACACCGT
TGTCCCCGTTAATAACGCAACCGCTACCGCCTTTTTGCGTTACAAAACAACCACAACACAATCCTTGACT
TTGTCCAAGATTCCTCCAATAAACGCTACAAGCATCGCTCAAAACTTCTCAGATGCTCTAAGAAGCCTAA
ACTCGCGCGATTATCCGACCAACGTTCCTTTAAAGGTAGACCACTCGCTGTTCTTCGCTATAGGAGTTGG
CGTAAACCCGTGTGCCACGTGCATTAACGGAACCAAGAACATTGCCGACATCAACAATGTTACCTTTGTG
ATGCCAACGATGGCTTTGCTTCAAGCGCATTATTTCAACAAAAGCAAAGGCGTTTTCACCGATGATTTTC
CCGGGAGACCCTTGACGCCGTTTGACTACACCGGCGGTAATAAGAGTATACCGTTGAGTAATCTTCAGAC
AAAGAACGGAACACAAGTCTATAGACTTGAGTTTAACGCAACGGTACAAATTGTTATCCAAGGGACAAGT
GTAATTGCACCAGAGAGCCATCCTACGCATCTGCATGGATCAAACTTCTTCGTGGTTGGTAAGGGATTAG
GGAACTTTGATCCGTTGATGGATCCTAAGAAGTTTAACCTCGTTGATCCGGTGGAGAGGAACACTGTTAG
TGTCCCTACTGCTGGATGGACAGCCATTCGGTTTATAGCAGACAATCCAGGTGTTTGGTTCTTCCATTGT
CACTTGGAAGTGCACACTTCTTGGGGACTCAAAATGGCGTTTCTTGTGGAAGACGGCAAAGGTTCTAATG
AAAAACTTCCACCGCCTCCAAGTGATCTTCCCAAATGCTAAAAGAGATCTTCTTCACCTGTTGAGCTTTG
AGAAACGTTTGGTTTACTTGTACATTCAAGAAATAGTCAATAGCCTGAAAAGTTATAAGACTTTCTCAGG
TCTTTTGCATATTTTCTTTCTCTTTGTTCTTGTTAAGTTTGTACAAAAAAAAGTAACTTATGATTGGAAC
ATAATTGAAATTTCAAGATTTTTTTTAAT