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Detail for ZS11_C06G20310.t1

Genome:
ZS11: ZS11_C06G20310.t1
ZS11_v0: BnaC06T0167200ZS
WE: WE_A07G21420.t1
WE_v0: BnaA07T0167300WE
Darmor: A07p20420.1_BnaDAR
BH: BnaC06T179300BH
Quinta: BnaA07T0133100QU
ZS2: BnaC06T154800ZS2
SW: BnaA07T183200SW
Express61: A07p015700.1_BnaEXP
Xiaoyun: BnaA07G0170600XY
P202: BnaC06G046480P202.1
BL: BnaC06T179300BH
TA: BnaA07T173700TA
Da-Ae: Not available
RB: BnaC06T171900RB
No2127: BnaC06T0154200NO
P130: BnaA07G019820P130.1
Length: 267
KOG ID: KOG3049
KOG E-value: 8.140000e-107
KOG Score: 311.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K00235 SDHB, SDH2; succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]
NR Protein: VDD61672.1
NR E-value: 1.200000e-141
NR Score: 507.7
NR Annotation: VDD61672.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: Q8LB02|SDHB2_ARATH
SwissProt E-value: 3.450000e-106
SwissProt Score: 311.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2
CDS Sequence (815 bp)
ATGGCGTGTGGTTTGATCGGAAGAGTTGTTGGAAGGAACCCGTCGAGGGCGGCGCGATTGATTCCGTCGC
GTTGGACATCATCAGGAGCACAAGCACAGTCAAAAGCTGTCGTAGGAGCGAAACTGAAGACGTTCCAGAT
CTACAGATGGAATCCAGATTCTCCCGGGAAGCCTGAGCTCCAAGACTACCAGATCGATCTCAAAGACTGT
GGCCCCATGGTTCTAGACGCGCTGATCAAGATCAAAAACGAGATGGATCCGTCGCTCACTTTCCGTCGAT
CGTGCCGAGAAGGCATCTGCGACGAAGATCGAGTCGGAGTCTTCCAAGGAGACGACGATCACGCCTCTGC
CGCATATAGGAAGACTCCAGCGTCTGTTCCTGGGAAGGAGATTCTGCAGAGTAAGAAGGATAGAGCTAAG
CTTGATGGGATGTATGAGTGCATTCTCTGCGCTTGTTGTAGCACTTCTTGCCCTAGCTATTGGTGGAACC
CTGAGTCTTATCTTGGCCCTGCCGCTTTGCTCCATGCCAACAGGCGGTTTCTACTTCCTGTTAGTTGTGG
TGTAAGGGAAGGTGCTTCTTTACATGTTTCTGTAGAAAACTGCAAGTCCAACTGCCTGATTGTGTCCATA
TCATTCATTATGTGGATAAGCGACAGTCGAGATGAGTATACTAAAGAAAGACTTGAAGCCATTAACGACG
AGTTCAAGCTCTATCGATCACACACATCAAGCAACTTCAGAAATAAGATTCCTCCTGGTGGGACAGGACC
CTCTTGGAAGCTTTTCGGGTTCTCGGCTACCTGA
Upstream Sequence
ATGGCGTGTGGTTTGATCGGAAGAGTTGTTGGAAGGAACCCGTCGAGGGCGGCGCGATTGATTCCGTCGC
GTTGGACATCATCAGGAGCACAAGCACAGTCAAAAGCTGTCGTAGGAGCGAAACTGAAGACGTTCCAGAT
CTACAGATGGAATCCAGATTCTCCCGGGAAGCCTGAGCTCCAAGACTACCAGATCGATCTCAAAGACTGT
GGCCCCATGGTTCTAGACGCGCTGATCAAGATCAAAAACGAGATGGATCCGTCGCTCACTTTCCGTCGAT
CGTGCCGAGAAGGCATCTGCGACGAAGATCGAGTCGGAGTCTTCCAAGGAGACGACGATCACGCCTCTGC
CGCATATAGGAAGACTCCAGCGTCTGTTCCTGGGAAGGAGATTCTGCAGAGTAAGAAGGATAGAGCTAAG
CTTGATGGGATGTATGAGTGCATTCTCTGCGCTTGTTGTAGCACTTCTTGCCCTAGCTATTGGTGGAACC
CTGAGTCTTATCTTGGCCCTGCCGCTTTGCTCCATGCCAACAGGCGGTTTCTACTTCCTGTTAGTTGTGG
TGTAAGGGAAGGTGCTTCTTTACATGTTTCTGTAGAAAACTGCAAGTCCAACTGCCTGATTGTGTCCATA
TCATTCATTATGTGGATAAGCGACAGTCGAGATGAGTATACTAAAGAAAGACTTGAAGCCATTAACGACG
AGTTCAAGCTCTATCGATCACACACATCAAGCAACTTCAGAAATAAGATTCCTCCTGGTGGGACAGGACC
CTCTTGGAAGCTTTTCGGGTTCTCGGCTACCTGA
Downstream Sequence
GTTTGTGATAAAGGATCTGGTGGTGGACATGACGAATTTTTACAATCAGTACAAGAGTAT
TGAGCCGTGGTTGAAGAGGAAGACTCCAGCGTCTGTTCCTGGGAAGGAGATTCTGCAGAG
TAAGAAGGATAGAGCTAAGCTTGATGGGATGTATGAGTGCATTCTCTGCGCTTGTTGTAG
CACTTCTTGCCCTAGCTATTGGTGGAACCCTGAGTCTTATCTTGGCCCTGCCGCTTTGCT
CCATGCCAACAGGTTCACAAATTCTTGCTTCTTTTTTTTTTAAATAGTGGAGCTTGATTG
GTTTAAGCAAATAAGATTTGATTAAGTTGTGAATATTTAGTTTACATTATCATATACGGT
TCTTAGGTTGCTTTAAATCTAGTTTAGCTCTGAAGGATTGAGATTCTGCTTAAGATTTGG
GAAATTGATTTATGAATGGCTAGCTGGTAGTTTACGTTAGATCATTTTGTATGGTCATTT
AGGCGGTTTCTACTTCCTGTTAGTTGTGGTGTAAGGGAAGGTGCTTCTTTACATGTTTCT
GTAGAAAACTGCAAGTCCAACTGCCTGATTGTGTCCATATCATTCATTATGTATGGACAT
TTGGGTTGTTTTTGTTCCGGAACGACTGTTTGTGCTTCTTCAAATTTCTCTTGTAACAAT
GACATTTCTTTTAACATATGCAGGTGGATAAGCGACAGTCGAGATGAGTATACTAAAGAA
AGACTTGAAGCCATTAACGACGAGTTCAAGCTCTATCGGTGCCACACTATCTTGAACTGT
GCTCGTGCCTGTCCAAAGGGATTAAACCCAGGGAAACAGATCACACACATCAAGCAACTT
CAGAAATAAGGTTAACACAACAACACAAATCATGCAATGCCCATTGGAATCTCATTTATC
AATGGGTTTTTTTTTGGAGCTAATAAGTCTGCAAGAAACTCTGATTTCGGAATAATTCTT
GTATTGCTTTTGCTAACTTACAAATATCAGAACAGATGAGTTTGCTTTGCCTTTATATAA
ACATCCCATTTTCGAGTTTTGCTTTATTTTACTGAATAAAAAGAAAAACAATGATGACCC
TAACAATTCTACAAACAGTGTTTGAGCAGCAGAGCAGATGAGTTTGTGTTCATGTTTTTT
AACCTTTGATTTTATATTCCGTAATAAGGCTCAAAAGTAAAGGCTGTACAAAGATGAGAT
CAAATGACGTCACCTACAATATGCTAACTTGGCAGATTCCTCCTGGTGGGACAGGACCCT
CTTGGAAGCTTTTCGGGTTCTCGGCTACCTGAATCCTTGATCGTTTGTCTGATGATCATG
ATTATGAATCTGACGATGATGATGAGGAAGAAGAATAAAAAGGAAGTAAGGAAATCGTGA
ATATAAATGGTGATGATGGTGAAAAAAGAGAAGATGGGTCTCATGATGATGATGATGATG
ATGATGGAAGGTTAGGTTTTTGTGATGATGATGATCATGTGGAAGAATTTGATGAAGAGA
AGATGGTGTCTGGTTTAAGAAATAATGACTTAATTACTTGCAGCCGTTTCTAACAACTTA
ATAGATGAACGACTATATATCTATGTAAATGTGATTTAACTATTAAATAAAAAAACCGTG
GTTTATAAACTACTAGTATTATAGCATGGGAATTTTCTTTTTGTTTAAAAATAACATTGC
ATATAACTAAAATTACCTTTATAACATTACAGTGATTTATCAGAGAGAGATGAATATACA
TAAACAATGGATTAACACACATTTATCAGTGTTCAAAAAAAAAATCACACACACATTTAT
GATTCATTAACCACAAACATATAAAATTGTACATGATTAATTTGGAAATGTGATTAACAT
CCCAAAATGTCATTCCATAATTCTTTTCTAATTTTTGGAAGAGAAAAAGACAAAAATAGC
ACTAAATCAAGTTTTTGTTCTCAAACTAGCACTCAAGGTCAAAAGTCACAAAAATAGCAC
TTAATGTTTTATCAAAAATC
Pro Sequence
MACGLIGRVVGRNPSRAARLIPSRWTSSGAQAQSKAVVGAKLKTFQIYRW
NPDSPGKPELQDYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGIC
DEDRVGVFQGDDDHASAAYRKTPASVPGKEILQSKKDRAKLDGMYECILC
ACCSTSCPSYWWNPESYLGPAALLHANRRFLLPVSCGVREGASLHVSVEN
CKSNCLIVSISFIMWISDSRDEYTKERLEAINDEFKLYRSHTSSNFRNKI
PPGGTGPSWKLFGFSAT
mRNA Sequence
ATGGCGTGTGGTTTGATCGGAAGAGTTGTTGGAAGGAACCCGTCGAGGGCGGCGCGATTGATTCCGTCGC
GTTGGACATCATCAGGAGCACAAGCACAGTCAAAAGCTGTCGTAGGAGCGAAACTGAAGACGTTCCAGAT
CTACAGATGGAATCCAGATTCTCCCGGGAAGCCTGAGCTCCAAGACTACCAGATCGATCTCAAAGACTGT
GGCCCCATGGTTCTAGACGCGCTGATCAAGATCAAAAACGAGATGGATCCGTCGCTCACTTTCCGTCGAT
CGTGCCGAGAAGGCATCTGCGACGAAGATCGAGTCGGAGTCTTCCAAGGAGACGACGATCACGCCTCTGC
CGCATATAGGAAGACTCCAGCGTCTGTTCCTGGGAAGGAGATTCTGCAGAGTAAGAAGGATAGAGCTAAG
CTTGATGGGATGTATGAGTGCATTCTCTGCGCTTGTTGTAGCACTTCTTGCCCTAGCTATTGGTGGAACC
CTGAGTCTTATCTTGGCCCTGCCGCTTTGCTCCATGCCAACAGGCGGTTTCTACTTCCTGTTAGTTGTGG
TGTAAGGGAAGGTGCTTCTTTACATGTTTCTGTAGAAAACTGCAAGTCCAACTGCCTGATTGTGTCCATA
TCATTCATTATGTGGATAAGCGACAGTCGAGATGAGTATACTAAAGAAAGACTTGAAGCCATTAACGACG
AGTTCAAGCTCTATCGATCACACACATCAAGCAACTTCAGAAATAAGATTCCTCCTGGTGGGACAGGACC
CTCTTGGAAGCTTTTCGGGTTCTCGGCTACCTGA