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Detail for ZS11_C06G23940.t1

Genome:
ZS11: ZS11_C06G23940.t1
ZS11_v0: BnaC06T0193800ZS
WE: WE_A07G23410.t1
WE_v0: BnaA07T0185100WE
Darmor: A07p22450.1_BnaDAR
BH: BnaC06T210800BH
Quinta: BnaC06T0180300QU
ZS2: BnaC06T182300ZS2
SW: BnaA07T202500SW
Express61: A09p037570.1_BnaEXP
Xiaoyun: BnaC06G0193900XY
P202: BnaA07G017880P202.2
BL: BnaC06T210800BH
TA: BnaA07T191900TA
Da-Ae: Not available
RB: BnaC06T200900RB
No2127: BnaA07T0186100NO
P130: BnaA07G021410P130.1
Length: 252
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009813(flavonoid biosynthetic process)
Cellular Component: -
Molecular Function: GO:0016872(intramolecular lyase activity),GO:0045430(chalcone isomerase activity)
KEGG Ortholog: K01859 E5.5.1.6; chalcone isomerase [EC:5.5.1.6]
NR Protein: XP_013718129.1
NR E-value: 1.000000e-134
NR Score: 484.6
NR Annotation: XP_013718129.1 chalcone--flavonone isomerase-like [Brassica napus]
SwissProt Protein: O22651|CFI_RAPSA
SwissProt E-value: 9.770000e-155
SwissProt Score: 433.0
SwissProt Annotation: Chalcone--flavonone isomerase OS=Raphanus sativus OX=3726 GN=CHI PE=2 SV=1
CDS Sequence (769 bp)
ATGTCTTCTTCCCACTGTCCAACACCGTTACCCTCCGTCACCAAACTTCAAGTAGACTCCGTTACTTTTC
CACCCTCAGTCATCTCACCGGCTTCCTCCAATCCCCTCTTCCTCGGTGGCGCAGGTGTGCGAGGTTTGGA
TATCCACGGAAAATTCGTGATCTTCACCGTCATCGGTGTTTACCTAGATGCTGTCGCCGTCCCGTCACTT
TCCGTTAAGTGGAAAGGCAAAACCACAGAGGAGCTAACAGAATCCGTCCCTTTTTTCCGTGAAATCGTCA
CGGGTTCGTTTGAGAAGTTTATTAAGGTGACGATGAAGCTACCCTTAACAGGACAGCAGTATTCAGAGAA
AGTAACGGAGAACTGTGTCGCGATCTGGAAATCGTTAGGTATTTACACAGACTCTGAAGCTAACGCTGTG
AAGAAGTTTTTGGAGGTCTCCAAGGACCAAACGTTCCCTCCTGGTGCTTCGATTCTCTTTGCTCTCTCCC
CTAACGGCTCTCTCACGATTGCGTTTTCGAAAGACGATAGTATTCCTAAAACCGGAAAAGCCGTAATCGA
GAATAAATTGTTGGCAGAGGCAGTTCTTGAATCGATCATAGGAAAGAAGGGTGTGTCTCCTGGGGCTAGG
TTGAGTCTTGCCGAGAGATTATCTCAGCTGATGAAGGAGAACAAGGTCGAAAAAGATGCAACAAAGACTG
ATAATCAAGATGAAGCTAACGATGTTTCCCTTGGAGATAAGTTGGCCAAAGAGAACTGA
Upstream Sequence
GTCCTTGTTAAACAAAGGGGTCAGAGTTTTCTCAACCACCATATTGAATCTTCCATACAAATCCTTAAAG
GGCAAAATCGTTTTAACTCCTCCACGTGCTTACATACCCAACACTCGTAATCGCAACTCTTGGCTACCTA
CCTCCTACCTCCTCCCTCTCTCTTACATTATTACCATCAAACATTCAAACCATGTCTTCTTCCCACTGTC
CAACACCGTTACCCTCCGTCACCAAACTTCAAGTAGACTCCGTTACTTTTCCACCCTCAGTCATCTCACC
GGCTTCCTCCAATCCCCTCTTCCTCGGTGGCGCAGGTGTGCGAGGTTTGGATATCCACGGAAAATTCGTG
ATCTTCACCGTCATCGGTGTTTACCTAGATGCTGTCGCCGTCCCGTCACTTTCCGTTAAGTGGAAAGGCA
AAACCACAGAGGAGCTAACAGAATCCGTCCCTTTTTTCCGTGAAATCGTCACGGGTTCGTTTGAGAAGTT
TATTAAGGTGACGATGAAGCTACCCTTAACAGGACAGCAGTATTCAGAGAAAGTAACGGAGAACTGTGTC
GCGATCTGGAAATCGTTAGGTATTTACACAGACTCTGAAGCTAACGCTGTGAAGAAGTTTTTGGAGGTCT
CCAAGGACCAAACGTTCCCTCCTGGTGCTTCGATTCTCTTTGCTCTCTCCCCTAACGGCTCTCTCACGAT
TGCGTTTTCGAAAGACGATAGTATTCCTAAAACCGGAAAAGCCGTAATCGAGAATAAATTGTTGGCAGAG
GCAGTTCTTGAATCGATCATAGGAAAGAAGGGTGTGTCTCCTGGGGCTAGGTTGAGTCTTGCCGAGAGAT
TATCTCAGCTGATGAAGGAGAACAAGGTCGAAAAAGATGCAACAAAGACTGATAATCAAGATGAAGCTAA
CGATGTTTCCCTTGGAGATAAGTTGGCCAAAGAGAACTGATTGTGTGGGAGGTTTTTCTTGGTCGTCTTT
GAGGGCTTTATGTTTCTATATCTAATCATGTTGTTTAGTTCAC
Downstream Sequence
GGTTCGACTACGCTTGCCTTCTTTTTTTTCTTTTCTTTTAAATCTATGATGTTTATTTTT
ATTTTTATTTTTCTACGCAGGTGTGCGAGGTTTGGATATCCACGGAAAATTCGTGATCTT
CACCGTCATCGGTGTTTACCTAGATGCTGTCGCCGTCCCGTCACTTTCCGTTAAGTGGAA
AGGCAAAACCACAGAGGAGCTAACAGAATCCGTCCCTTTTTTCCGTGAAATCGTCACGGG
TACTTCCTTACACCACTTACTTAAGACACACGTCATATGACTTATATCAAAGTGTTTCTT
TTTTAGAAAGCGACGTCATATCAAAGTGTTTTTAAGTAAAAAGGGCCATTCTAATTTGTA
TTGACCGTCATTAATTAAAAACCTTTTTGTTTAACTCTTAATTAGGTTCGTTTGAGAAGT
TTATTAAGGTGACGATGAAGCTACCCTTAACAGGACAGCAGTATTCAGAGAAAGTAACGG
AGAACTGTGTCGCGATCTGGAAATCGTTAGGTATTTACACAGACTCTGAAGCTAACGCTG
TGAAGAAGTTTTTGGAGGTCTCCAAGGACCAAACGTTCCCTCCTGGTGCTTCGATTCTCT
TTGCTCTCTCCCCTAACGGCTCTCTCACGGTAATTTTCACAAAACTTCTTTATAACATTG
ACTTGTGCGCTTCCGTTTACATGTTATATAGTATGATTTTGTTCTTACATATAAAACCAT
AGCTTTTGGCATCATAAATGCAAATGTGACCAACTGTAATTATCATAGCGACTGGAAAAA
TATTATACGCAAAGTCTGTAGAGGTCACGTAATCGAGTTGACGTTTGAGACAGAATTAAT
AATACTACGTGTTAGTGCCTTAGTAGTTTCAGGTTTCGGGTAACTTCTTCACATTAGAAA
AAAAAAACAGAATATGTGTGTTTACCTCTTAAGAGGAGTATGTTTACGTAATTGTGACTT
TAAAAAAAAGTTTGTTTACATATAGAAGCTAATGTAGAGATGACGTTTGAAACATGTATA
TTTGAGTAAAAATTGTGTTTTCATTAAGTTGTTTAGGTGTGAACGCAATTGACGTTTGAA
GATATAGTAGTACTACATACGTGATACCTTTGAAAAAACTTTATGACATCTCTTTGTTGT
GAATTAAAATGTTTGCAGATTGCGTTTTCGAAAGACGATAGTATTCCTAAAACCGGAAAA
GCCGTAATCGAGAATAAATTGTTGGCAGAGGCAGTTCTTGAATCGATCATAGGAAAGAAG
GGTGTGTCTCCTGGGGCTAGGTTGAGTCTTGCCGAGAGATTATCTCAGCTGATGAAGGAG
AACAAGGTCGAAAAAGATGCAACAAAGACTGATAATCAAGATGAAGCTAACGATGTTTCC
CTTGGAGATAAGTTGGCCAAAGAGAACTGATTGTGTGGGAGGTTTTTCTTGGTCGTCTTT
GAGGGCTTTATGTTTCTATATCTAATCATGTTGTTTAGTTCACATCACATGTTTTTATTT
GCTTCTACTCGTAAGAATAATTGAATAATCTCATGAAACTGGATCAAATAAATCAAAACT
ATATTATCAATTGATCTTGATGCTGAGTCGTTAAAATCAAATCCACTTAGTTACTAAAGT
CATTATGTTTTAGTAAATATCAGATTAGCTAACTAAATAATTATCATATTGCCATAGTGG
AGATCAAAGTATAATATATTGAATGTTGTGCTCCTATACATGAAGACCAAGAGGGCATAC
ACAATCGAGCCACCATCATCTTAGACATTTAATAGCCACTCACCATCGTCTACAAGTGAA
TCCATGCTTAACATTTTAATTTAATGTTACTCAAATTTCTTCTTTGTTTTTTTTTGCAAC
ACAGTATATTAAAGACGCAATATGCTTAATTAATTCCAACCGGAGTAAAAATAAATCGAT
AACAACCAAAGTGAAACTCAAGGGTATGCGAACAACAAAAGTAGAACGATAAAACAAAAA
AGGATAGAGATGTTACATGG
Pro Sequence
MSSSHCPTPLPSVTKLQVDSVTFPPSVISPASSNPLFLGGAGVRGLDIHG
KFVIFTVIGVYLDAVAVPSLSVKWKGKTTEELTESVPFFREIVTGSFEKF
IKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDSEANAVKKFLEVSKDQ
TFPPGASILFALSPNGSLTIAFSKDDSIPKTGKAVIENKLLAEAVLESII
GKKGVSPGARLSLAERLSQLMKENKVEKDATKTDNQDEANDVSLGDKLAK
EN
mRNA Sequence
GTCCTTGTTAAACAAAGGGGTCAGAGTTTTCTCAACCACCATATTGAATCTTCCATACAAATCCTTAAAG
GGCAAAATCGTTTTAACTCCTCCACGTGCTTACATACCCAACACTCGTAATCGCAACTCTTGGCTACCTA
CCTCCTACCTCCTCCCTCTCTCTTACATTATTACCATCAAACATTCAAACCATGTCTTCTTCCCACTGTC
CAACACCGTTACCCTCCGTCACCAAACTTCAAGTAGACTCCGTTACTTTTCCACCCTCAGTCATCTCACC
GGCTTCCTCCAATCCCCTCTTCCTCGGTGGCGCAGGTGTGCGAGGTTTGGATATCCACGGAAAATTCGTG
ATCTTCACCGTCATCGGTGTTTACCTAGATGCTGTCGCCGTCCCGTCACTTTCCGTTAAGTGGAAAGGCA
AAACCACAGAGGAGCTAACAGAATCCGTCCCTTTTTTCCGTGAAATCGTCACGGGTTCGTTTGAGAAGTT
TATTAAGGTGACGATGAAGCTACCCTTAACAGGACAGCAGTATTCAGAGAAAGTAACGGAGAACTGTGTC
GCGATCTGGAAATCGTTAGGTATTTACACAGACTCTGAAGCTAACGCTGTGAAGAAGTTTTTGGAGGTCT
CCAAGGACCAAACGTTCCCTCCTGGTGCTTCGATTCTCTTTGCTCTCTCCCCTAACGGCTCTCTCACGAT
TGCGTTTTCGAAAGACGATAGTATTCCTAAAACCGGAAAAGCCGTAATCGAGAATAAATTGTTGGCAGAG
GCAGTTCTTGAATCGATCATAGGAAAGAAGGGTGTGTCTCCTGGGGCTAGGTTGAGTCTTGCCGAGAGAT
TATCTCAGCTGATGAAGGAGAACAAGGTCGAAAAAGATGCAACAAAGACTGATAATCAAGATGAAGCTAA
CGATGTTTCCCTTGGAGATAAGTTGGCCAAAGAGAACTGATTGTGTGGGAGGTTTTTCTTGGTCGTCTTT
GAGGGCTTTATGTTTCTATATCTAATCATGTTGTTTAGTTCAC