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Detail for ZS11_C06G34130.t1

Genome:
ZS11: ZS11_C06G34130.t1
ZS11_v0: BnaC06T0276200ZS
WE: WE_A07G30210.t1
WE_v0: BnaC06T0298000WE
Darmor: C06p33160.1_BnaDAR
BH: BnaC06T304700BH
Quinta: BnaC06T0262700QU
ZS2: BnaC06T268700ZS2
SW: BnaC06T292200SW
Express61: C06p024770.1_BnaEXP
Xiaoyun: BnaA07G0250200XY
P202: BnaC06G061020P202.1
BL: BnaC06T304700BH
TA: BnaC06T272800TA
Da-Ae: Not available
RB: BnaC06T289600RB
No2127: BnaC06T0262200NO
P130: BnaC06G036080P130.1
Length: 572
KOG ID: KOG1223
KOG E-value: Not available
KOG Score: 925.0
KOG Annotation: Amino acid transport and metabolism
Biological Process: GO:0009058(biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008909(isochorismate synthase activity)
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: XP_013682507.1
NR E-value: Not available
NR Score: 1122.5
NR Annotation: XP_013682507.1 isochorismate synthase 1, chloroplastic [Brassica napus]
SwissProt Protein: Q9S7H8|ICS1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1011.0
SwissProt Annotation: Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS1 PE=1 SV=2
CDS Sequence (1743 bp)
ATGGCCTCACTTCATCTTTCTTCTCGGTTTCTGGCCACAAACACTAAAAAACACGGCTCCATCTCCATCT
CTCATCATTACTCTCCAACTCCATTCACCAGATTATTCTCCCGCAAGAAATTTATGTCCTGTTCGATGTC
TATGAACGGATGCGAAGGGGATTTCAATACGCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTGTT
TTGTCTCCGACAGCCGCCACTGAGAGGCTAATCTCCGCCGTTTCCGAGCTCAAATCTCAACCTCCGCCGT
TTTCCTCCGGCGTCGTCCGGTTACAGGTACCAATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGC
CCAGGACGAGATCCAGCCTCGCTGCTTCTTCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTC
GACTTAGCGAACGACAACGAGAACGCGGACGGAAACGGACGAGGCGGCTCATCGGATCGTGATCTGGTTA
GCGTCGCCGGTATCGGCTCCGCAGTGTTCTTCCGTGACCTTGACGCCTTCTCTCACGATGACTGGAGATC
CATCCGAAGGTTTCTTTCGTCCAAGTCGCCTCTGATTCGCGCCTATGGAGGCATGCGGTTTGATCCTAAC
GGCAAGATCTCTGTGGAGTGGGAGCCCTTTGGTGCATTTTACTTTGCAGTGCCTCAGGTTGAGTTTAATG
AGTTTGGTGGAAGCTCAATGTTGGCTGCTACTCTTGCTTGGGACGATGAACTCTCTTGGACGCTGGAGAA
TGCTATTGAAGCACTTCAGGAGACTATGCTTCAGGTTTCTTCTGTTGTGGTGAGGTTACGAAGGGAGTCT
CTTGGAGTATCTGTGCTTCGCAAGAATCATGTTCCTACAAAAGGGGCGTATGACCCTGCTGTCGAGAAGG
CTTTGGAGATTATAAAAAGGAAGAGTTCTTCTCTCAGCAAGGTCGTGCTTGCTCGCAACAGCAGAGTTAT
AACAGATACCGACATTGATCCCATTGCTTGGCTTGCACAGTTACAGAGTGAAGGGCATGATGCGTATCAG
TTCTGTCTTCAACCACCAGGTGCACCAGCTTTTATCGGAAACACGCCTGAGAGACTTTTCCAAAGGAATC
AGTTAGGTGTCTGCAGTGAAGCTTTGGCTGCAACTAGGCCTCGAGCTGCTTCAACGGCTCGTGATATGGA
GATAGAGCGTGACTTACTAACCAGCCCCAAAGACGACCTTGAGTTTTCTATTGTACGTGAGAACATAAGA
GAAAAGTTAAACTCTATATGTGACAAGGTAGTTGTTAAGCCCCAGAAAACTGTGAGGAAGCTTGCAAGAG
TGCAACACCTGTATTCTCAATTGGCAGGGAGACTTAGGAGGGAAGATGATGAGTTTGACATCTTGGCTGC
TCTGCATCCAACTCCAGCTGTTTGTGGGCTTCCAGCAGAAGAAGCTAGGCTTTTGATTAAGGAAATAGAA
TCATTTGATAGAGGAATGTACGCTGGACCTATTGGTTTCTTTGGTGGCGAGGAGAGTGAATTTGCAGTTG
GTATCAGATCAGCTCTAGTGGAGAAGGGTCTTGGAGCATTGATCTATGCGGGGACAGGGATTGTAGCTGG
AAGCAACCCAACCTCAGAGTGGAATGAGCTTGATCTGAAGATATCTCAGTTCACCAAGTCAATTGAGTCT
GAGGCAACAACAACAACAACTCTGCAGCCAATTAATTGA
Upstream Sequence
GGGGCCTAGCTACACCCGTCCCCTATTTATTGAGGGACGAATCCATAATCCATATCATCAAATATCTACT
TGAACCAAAGAGAAAAACtatataGTATATTCCTCCAAACAGAAAAAAAGAAATAAACAAAATATATAAA
CAAATCACTCACCATCTCTCTTTTGTTCGTTCTCTAAGCAATCTCCAATGGCCTCACTTCATCTTTCTTC
TCGGTTTCTGGCCACAAACACTAAAAAACACGGCTCCATCTCCATCTCTCATCATTACTCTCCAACTCCA
TTCACCAGATTATTCTCCCGCAAGAAATTTATGTCCTGTTCGATGTCTATGAACGGATGCGAAGGGGATT
TCAATACGCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTGTTTTGTCTCCGACAGCCGCCACTGA
GAGGCTAATCTCCGCCGTTTCCGAGCTCAAATCTCAACCTCCGCCGTTTTCCTCCGGCGTCGTCCGGTTA
CAGGTACCAATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGCCCAGGACGAGATCCAGCCTCGCT
GCTTCTTCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTCGACTTAGCGAACGACAACGAGAA
CGCGGACGGAAACGGACGAGGCGGCTCATCGGATCGTGATCTGGTTAGCGTCGCCGGTATCGGCTCCGCA
GTGTTCTTCCGTGACCTTGACGCCTTCTCTCACGATGACTGGAGATCCATCCGAAGGTTTCTTTCGTCCA
AGTCGCCTCTGATTCGCGCCTATGGAGGCATGCGGTTTGATCCTAACGGCAAGATCTCTGTGGAGTGGGA
GCCCTTTGGTGCATTTTACTTTGCAGTGCCTCAGGTTGAGTTTAATGAGTTTGGTGGAAGCTCAATGTTG
GCTGCTACTCTTGCTTGGGACGATGAACTCTCTTGGACGCTGGAGAATGCTATTGAAGCACTTCAGGAGA
CTATGCTTCAGGTTTCTTCTGTTGTGGTGAGGTTACGAAGGGAGTCTCTTGGAGTATCTGTGCTTCGCAA
GAATCATGTTCCTACAAAAGGGGCGTATGACCCTGCTGTCGAGAAGGCTTTGGAGATTATAAAAAGGAAG
AGTTCTTCTCTCAGCAAGGTCGTGCTTGCTCGCAACAGCAGAGTTATAACAGATACCGACATTGATCCCA
TTGCTTGGCTTGCACAGTTACAGAGTGAAGGGCATGATGCGTATCAGTTCTGTCTTCAACCACCAGGTGC
ACCAGCTTTTATCGGAAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCTGCAGTGAAGCT
TTGGCTGCAACTAGGCCTCGAGCTGCTTCAACGGCTCGTGATATGGAGATAGAGCGTGACTTACTAACCA
GCCCCAAAGACGACCTTGAGTTTTCTATTGTACGTGAGAACATAAGAGAAAAGTTAAACTCTATATGTGA
CAAGGTAGTTGTTAAGCCCCAGAAAACTGTGAGGAAGCTTGCAAGAGTGCAACACCTGTATTCTCAATTG
GCAGGGAGACTTAGGAGGGAAGATGATGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCCAGCTGTTT
GTGGGCTTCCAGCAGAAGAAGCTAGGCTTTTGATTAAGGAAATAGAATCATTTGATAGAGGAATGTACGC
TGGACCTATTGGTTTCTTTGGTGGCGAGGAGAGTGAATTTGCAGTTGGTATCAGATCAGCTCTAGTGGAG
AAGGGTCTTGGAGCATTGATCTATGCGGGGACAGGGATTGTAGCTGGAAGCAACCCAACCTCAGAGTGGA
ATGAGCTTGATCTGAAGATATCTCAGTTCACCAAGTCAATTGAGTCTGAGGCAACAACAACAACAACTCT
GCAGCCAATTAATTGAAGATGAGTAACAACATTTGTTTATCTTTGTAGTGTCTACGTTGTAAATAGAAAT
AATAATTGTTGAAAGTTCATAGGGGTTTTTCTGATTATATCTTCCTTGATTGTAACTAGGCCAGGCCTAA
TCTGAATGTTAATAGGCTTAGCCTTTTATGATTGTTAATGGGATTCTTTAGTGTTCTCTCATCAGAAG
Downstream Sequence
GGTTTTTTTTTCTTTCTTTTGAGTTCTTGGCTTTTTTTTTTCCAAGAATGTAGTTACATT
AACTGAGAAACCTTTTTGGACGGTTGCAGAAATTTATGTCCTGTTCGATGTCTATGAACG
GATGCGAAGGGGATTTCAATACGCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTG
TTTTGTCTCCGACAGCCGCCACTGAGAGGCTAATCTCCGCCGTTTCCGAGCTCAAATCTC
AACCTCCGCCGTTTTCCTCCGGCGTCGTCCGGTTACAGGTACATAGTATATAGACTATCC
TCCTCTACTTTTTTTAATAGAGATAACCAGATTTCACGTCAGTGAAAGAATCCGATCATG
CCATGTGGTTTCTTTGGATTGGTTTATGTTGATATCGCTCTCTGATTCGTTTCCTTGCCG
TATCGTAAAGCCTAATTCATTTAAGTTTTGCTTCTTTTAGCAAGATCCGAATCATTTAGT
GGGTTTAAAAAGAGAATCATTTACTAGACGAAAACATGCATATAAAGAGAGCTGATACAA
TTATTTAATACTCGTTAGAGCATCCCCAATGGTGTTGCCCAAAGAGGAATCTTTAGAAAA
ATTGTATTTTAATTTTTTAAGTATTATTATTTTTTTCTTTTTTCAGATAAAAAAAATATA
TCAATCAATCGCGGGTCGTTACATGTCATGGGGATCCGCAAATAGTGCAAGGATTTACTA
AGAAAGAGTCCTTATTTAAGAATTTTAAAGATTGAATCTTTAGTTTTTGGTGGGATCCAC
TGATTATTTAATTATCTTTTCCTTAAAGCATAAATATAGTATATACTTAAGTGGATTTGT
TAAAAAAAGTCATGCTGAAGGCTCCACAAAACAGATAAAATTGGTCATAAAAATCGCCAA
AGAAAGATCGACTGTTTCTTGTACTATTTGCGGACCCCACTGAAACGTGGCGGTCCGCGA
TTGATTATTTTTTTTTTATTCAAAGAAAACAAAAATAAAATAACTTTTTTTTAAGAAATC
CAAAAACAGTTTAGCGATAATCATGGCCTTATATTTCCAAAGGTCTTGCACACATACATC
ATTTTCTATGATTAAATTTTTGTATAGCTGTATCCCAGTGCTTATTATCATTGTTATAAA
AGGTTAGTGCTTTTGGAATTGGTTGTGTAATCATAAACAAAAAAAGCTATGGCTAGTAAT
GACCAAGACATAAGAAGAAGAAGAAGATATGACTAATCTATCACTAGTACTATTATTATT
AGTTTATGAATCATGCACATAGACGTATTGAGTCGTACAAGAATCTTTTTTTTTTTTTGA
TCAACAGTCGTACAAGAATCTAATAATCGAATTATTCATAATGCCATGGACGTAAAAAAA
AAAGAACAATTTTCTCTTGAGTCAATCTAAAGTTGACCAAGTTCAGAGTTGACCTAAACA
GTCAGCGAAAGATTAATGAGTGGTTCTAACTAATCCACCGTTAATTAGATTTGATCATTT
ATTAAGAAAACTGTAGTGGATAATGATTTGAGTCTGTGGGCCCCAATAGAACCGAACATT
TACCCGCGCAATTTTTCAAGAACCATAAATTTAATTTCGGTTTGGTTTGGTTTGGTTCGG
TTTAGGTACCAATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGCCCAGGACGAGA
TCCAGCCTCGCTGCTTCTTCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTCG
ACTTAGCGAACGACAACGAGAACGCGGACGGAAACGGACGAGGCGGCTCATCGGATCGTG
ATCTGGTTAGCGTCGCCGGTATCGGCTCCGCAGTGTTCTTCCGTGACCTTGACGCCTTCT
CTCACGATGACTGGAGATCCATCCGAAGGTAAAGTAATAAGCTTTGCGAATAATATTCTC
GTTTCGCTTCTAGGTGATCTGATTGTTGAGTGGTTTAACGTTTTTTGAAGGTTTCTTTCG
TCCAAGTCGCCTCTGATTCG
Pro Sequence
MASLHLSSRFLATNTKKHGSISISHHYSPTPFTRLFSRKKFMSCSMSMNG
CEGDFNTPLGTVETRTMSTVLSPTAATERLISAVSELKSQPPPFSSGVVR
LQVPIDQQIGAIDWLQAQDEIQPRCFFSRRSDVGRPDLLLDLANDNENAD
GNGRGGSSDRDLVSVAGIGSAVFFRDLDAFSHDDWRSIRRFLSSKSPLIR
AYGGMRFDPNGKISVEWEPFGAFYFAVPQVEFNEFGGSSMLAATLAWDDE
LSWTLENAIEALQETMLQVSSVVVRLRRESLGVSVLRKNHVPTKGAYDPA
VEKALEIIKRKSSSLSKVVLARNSRVITDTDIDPIAWLAQLQSEGHDAYQ
FCLQPPGAPAFIGNTPERLFQRNQLGVCSEALAATRPRAASTARDMEIER
DLLTSPKDDLEFSIVRENIREKLNSICDKVVVKPQKTVRKLARVQHLYSQ
LAGRLRREDDEFDILAALHPTPAVCGLPAEEARLLIKEIESFDRGMYAGP
IGFFGGEESEFAVGIRSALVEKGLGALIYAGTGIVAGSNPTSEWNELDLK
ISQFTKSIESEATTTTTLQPIN
mRNA Sequence
GGGGCCTAGCTACACCCGTCCCCTATTTATTGAGGGACGAATCCATAATCCATATCATCAAATATCTACT
TGAACCAAAGAGAAAAACtatataGTATATTCCTCCAAACAGAAAAAAAGAAATAAACAAAATATATAAA
CAAATCACTCACCATCTCTCTTTTGTTCGTTCTCTAAGCAATCTCCAATGGCCTCACTTCATCTTTCTTC
TCGGTTTCTGGCCACAAACACTAAAAAACACGGCTCCATCTCCATCTCTCATCATTACTCTCCAACTCCA
TTCACCAGATTATTCTCCCGCAAGAAATTTATGTCCTGTTCGATGTCTATGAACGGATGCGAAGGGGATT
TCAATACGCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTGTTTTGTCTCCGACAGCCGCCACTGA
GAGGCTAATCTCCGCCGTTTCCGAGCTCAAATCTCAACCTCCGCCGTTTTCCTCCGGCGTCGTCCGGTTA
CAGGTACCAATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGCCCAGGACGAGATCCAGCCTCGCT
GCTTCTTCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTCGACTTAGCGAACGACAACGAGAA
CGCGGACGGAAACGGACGAGGCGGCTCATCGGATCGTGATCTGGTTAGCGTCGCCGGTATCGGCTCCGCA
GTGTTCTTCCGTGACCTTGACGCCTTCTCTCACGATGACTGGAGATCCATCCGAAGGTTTCTTTCGTCCA
AGTCGCCTCTGATTCGCGCCTATGGAGGCATGCGGTTTGATCCTAACGGCAAGATCTCTGTGGAGTGGGA
GCCCTTTGGTGCATTTTACTTTGCAGTGCCTCAGGTTGAGTTTAATGAGTTTGGTGGAAGCTCAATGTTG
GCTGCTACTCTTGCTTGGGACGATGAACTCTCTTGGACGCTGGAGAATGCTATTGAAGCACTTCAGGAGA
CTATGCTTCAGGTTTCTTCTGTTGTGGTGAGGTTACGAAGGGAGTCTCTTGGAGTATCTGTGCTTCGCAA
GAATCATGTTCCTACAAAAGGGGCGTATGACCCTGCTGTCGAGAAGGCTTTGGAGATTATAAAAAGGAAG
AGTTCTTCTCTCAGCAAGGTCGTGCTTGCTCGCAACAGCAGAGTTATAACAGATACCGACATTGATCCCA
TTGCTTGGCTTGCACAGTTACAGAGTGAAGGGCATGATGCGTATCAGTTCTGTCTTCAACCACCAGGTGC
ACCAGCTTTTATCGGAAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCTGCAGTGAAGCT
TTGGCTGCAACTAGGCCTCGAGCTGCTTCAACGGCTCGTGATATGGAGATAGAGCGTGACTTACTAACCA
GCCCCAAAGACGACCTTGAGTTTTCTATTGTACGTGAGAACATAAGAGAAAAGTTAAACTCTATATGTGA
CAAGGTAGTTGTTAAGCCCCAGAAAACTGTGAGGAAGCTTGCAAGAGTGCAACACCTGTATTCTCAATTG
GCAGGGAGACTTAGGAGGGAAGATGATGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCCAGCTGTTT
GTGGGCTTCCAGCAGAAGAAGCTAGGCTTTTGATTAAGGAAATAGAATCATTTGATAGAGGAATGTACGC
TGGACCTATTGGTTTCTTTGGTGGCGAGGAGAGTGAATTTGCAGTTGGTATCAGATCAGCTCTAGTGGAG
AAGGGTCTTGGAGCATTGATCTATGCGGGGACAGGGATTGTAGCTGGAAGCAACCCAACCTCAGAGTGGA
ATGAGCTTGATCTGAAGATATCTCAGTTCACCAAGTCAATTGAGTCTGAGGCAACAACAACAACAACTCT
GCAGCCAATTAATTGAAGATGAGTAACAACATTTGTTTATCTTTGTAGTGTCTACGTTGTAAATAGAAAT
AATAATTGTTGAAAGTTCATAGGGGTTTTTCTGATTATATCTTCCTTGATTGTAACTAGGCCAGGCCTAA
TCTGAATGTTAATAGGCTTAGCCTTTTATGATTGTTAATGGGATTCTTTAGTGTTCTCTCATCAGAAG