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Detail for ZS11_A02G38090.t1

Genome:
ZS11: ZS11_A02G38090.t1
ZS11_v0: BnaA02T0316100ZS
WE: WE_A02G38810.t1
WE_v0: BnaA02T0314600WE
Darmor: A02p32170.1_BnaDAR
BH: BnaA02T375300BH
Quinta: BnaA02T0306900QU
ZS2: BnaA02T330800ZS2
SW: BnaA02T354600SW
Express61: A02p030760.1_BnaEXP
Xiaoyun: BnaA02G0318300XY
P202: BnaA02G026150P202.1
BL: BnaA02T375300BH
TA: BnaA02T313100TA
Da-Ae: Not available
RB: BnaA02T302500RB
No2127: BnaA02T0309100NO
P130: BnaA02G034970P130.1
Length: 166
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009773(photosynthetic electron transport in photosystem I)
Cellular Component: GO:0009535(chloroplast thylakoid membrane),GO:0010598(NAD(P)H dehydrogenase complex (plastoquinone))
Molecular Function: -
KEGG Ortholog: -
NR Protein: RID76056.1
NR E-value: 7.700000e-70
NR Score: 268.5
NR Annotation: RID76056.1 hypothetical protein BRARA_B03052 [Brassica rapa]
SwissProt Protein: Q9ZVE7|CRR3_ARATH
SwissProt E-value: 3.570000e-75
SwissProt Score: 225.0
SwissProt Annotation: Probable NAD(P)H dehydrogenase subunit CRR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR3 PE=2 SV=1
CDS Sequence (508 bp)
ATGGTGGTCTTATCCAGCAGCATCTTCTCCATGAGCAGAGCTTCAACAGCTATGGCTTCTCTAACCAACG
ACTCTCCATCTCCCCTTCCATCAAAACCTACCAAGAAACCGACAAGAATCAGCCAAAAACCCGGGAATGA
AAATCAGCAACTATCACGGAAGCAACGGCGAGAGAAGAAGCCATCAATAGCTCAGATCGAGAGAGCATTT
GGCGCTGGATCATATCGTGATTCTGAAGGGGAAATGGATATGAATACAGTATTCGATGAGCTTCTTCTGG
GTCATGCTAATAAGTTTGAAGGAAAGCTGGAGAAGAAGCTACGAGAGGTTGGCGAAATGTTTGTAGACCT
AACAGAGTCTAAGCTTCGTTCATCCGGGAAACCAGTTTTGCTGTTTACAATTCAATGGATACTTCCTATA
TGGATTGTGTCTCTGCTTTTGGCTTGTGGAATTATCAAACTTCCCTTTAGCCTCCCTTTACTTGATGACT
TGATCATGTGA
Upstream Sequence
AGCCAAGCTGCGGAAACCACACAAGACAAGAGAAGGCAATGGTGGTCTTATCCAGCAGCATCTTCTCCAT
GAGCAGAGCTTCAACAGCTATGGCTTCTCTAACCAACGACTCTCCATCTCCCCTTCCATCAAAACCTACC
AAGAAACCGACAAGAATCAGCCAAAAACCCGGGAATGAAAATCAGCAACTATCACGGAAGCAACGGCGAG
AGAAGAAGCCATCAATAGCTCAGATCGAGAGAGCATTTGGCGCTGGATCATATCGTGATTCTGAAGGGGA
AATGGATATGAATACAGTATTCGATGAGCTTCTTCTGGGTCATGCTAATAAGTTTGAAGGAAAGCTGGAG
AAGAAGCTACGAGAGGTTGGCGAAATGTTTGTAGACCTAACAGAGTCTAAGCTTCGTTCATCCGGGAAAC
CAGTTTTGCTGTTTACAATTCAATGGATACTTCCTATATGGATTGTGTCTCTGCTTTTGGCTTGTGGAAT
TATCAAACTTCCCTTTAGCCTCCCTTTACTTGATGACTTGATCATGTGATTGTACCTTTATACACACACC
ACATATTTACCATGATCACAATCACTTTTGTGTTTAGCCATCCATAATAATCTCAAAAGAAAGTGATTTA
TGTGAACATTTTTGTTAATCATAGTTAGAAAAATGTATACATAAACCCTATCCCACAAGAGAAATGTCAA
GAGG
Downstream Sequence
GTACACATACTCTGCAAACTGTATGACATGTGATTGTATGGATACTTGAAGTTTATTTGC
TTTGTTTTGTTTTAAAAGGGAAATGGATATGAATACAGTATTCGATGAGCTTCTTCTGGG
TCATGCTAATAAGTTTGAAGGAAAGCTGGAGAAGAAGCTACGAGAGGTTGGCGAAATGTT
TGTAGACCTAACAGAGTCTAAGCTTCGTTCATCCGGTAAGTTTAGTTTTTTCTTTCTTGA
AATGGTATTGGTAATAACAGCTCTCTTCCTTCTTGTCATAATGGGATGATTGATTTATGT
TGTAGGGAAACCAGTTTTGCTGTTTACAATTCAATGGATACTTCCTATATGGATTGTGTC
TCTGCTTTTGGCTTGTGGAATTATCAAACTTCCCTTTAGCCTCCCTTTACTTGATGACTT
GATCATGTGATTGTACCTTTATACACACACCACATATTTACCATGATCACAATCACTTTT
GTGTTTAGCCATCCATAATAATCTCAAAAGAAAGTGATTTATGTGAACATTTTTGTTAAT
CATAGTTAGAAAAATGTATACATAAACCCTATCCCACAAGAGAAATGTCAAGAGGTATAA
TATTGCAGTTCTCTGTAAAAAGTGTTTACTAAACGAACTGTATTTTACTATTACACCATC
TCATTTTGTCTAATGTTCCACATGTCATCGGTTTACAGTTATATTTACACAAAGTGATAT
CTATACCAAGTTTGGGTGTTTGTAGCAgcaaaaCACAATCGAAACTTGTATGCAAAATCA
TCCTGTTACAGTGAAAAAAAAAAAGAATAGTCCCTCACTCTCTATACTAATCTTGACGGT
GATTCCAAATTTAGATATAAAGCTGGCCATTTTAGGTAGTTAGTGGTAAGTGGCCAACAT
TTCTAACTCTAATTTTGCTTTTTTCAGTCGTGTATATTCTACCGGTTAACCAGTTTCTAT
AATCTCCAAAAGCTTAAGGCATCTATAATGGAATACCAAACACCAAATTTGGTGTAATTT
CATCTCTAACGAAACACTAAAATTTACATTATCCCACTAACTTACACTAAAAGTGATATT
ATCCCACCAAATTTGGTTTAGTGTGAATAGTGTTATAAGAAAATATATACGAGAAGACCA
AATTGTTTTGATAATCAGAATGGTAACTTGTCTATTGAAATATTAACCCTTTGAAACTAC
CTTTAAACCTCGATTATACTATCAGGATTTGATACCAACAGATATAAAATATACGCACAA
TAGAAGAAACAACCAACATAAACATTGTGCCCAGCATGGCGGTGCCGGTGGCGGAGATTC
CAGCTCTTGAGGCTGTGGTGGAAACATATGGCCAAGTCCATGTGTGCAACTTCGAGCATT
GGCTCCGCATCGGTAGCAAAACTTATGTCCACATCTGCCACGAAAATGCAATGTTATATA
TTCTTATCAAGATTAAAGCATATATATAACCGAAATTGGAAAGGAAATGATGTGATTAAA
AGATATGATACCTGCAAACTACGAGGACGCATCCTTTAGAAAGTTCAATCATGTGTTGGC
ATTTTCCGCACTGACGCCACAGTTTCTGATTTGCTAGGGCATGTAGCTTTAGCTCGCTTT
CTCTTAAATTTGGATGCATTATCTTGAAATCGTCGCATGACAAGTTATCATGCCATGGAA
ACTTGCAGTTGGTGCAGAAGGGCTCACCGCATTTTTCGCAGCATCTCCTAACTGCACTCT
CTTTATTCAGTTTTGAAAGCTCGGTTACGCGCATTAAAGCTGAGCACTTCGGGTTAGGGC
AATAAACTCTTTCCTCAAAAGGAATCGAGTTCTCTCTGATCCTTTGTCGCCAAATCTCTC
TTAATTTAGGTGTCAAAAGATCGGCACATCTATAAAAATTCAGTTCAGACTTGCAACGAA
ACTGAGGACACGTCATCACACTTCCTTCGAGTAGCCTTACCTCTATGTGTCGTTTCACAC
ACTCGGAACAAAACCGATGA
Pro Sequence
MVVLSSSIFSMSRASTAMASLTNDSPSPLPSKPTKKPTRISQKPGNENQQ
LSRKQRREKKPSIAQIERAFGAGSYRDSEGEMDMNTVFDELLLGHANKFE
GKLEKKLREVGEMFVDLTESKLRSSGKPVLLFTIQWILPIWIVSLLLACG
IIKLPFSLPLLDDLIM
mRNA Sequence
AGCCAAGCTGCGGAAACCACACAAGACAAGAGAAGGCAATGGTGGTCTTATCCAGCAGCATCTTCTCCAT
GAGCAGAGCTTCAACAGCTATGGCTTCTCTAACCAACGACTCTCCATCTCCCCTTCCATCAAAACCTACC
AAGAAACCGACAAGAATCAGCCAAAAACCCGGGAATGAAAATCAGCAACTATCACGGAAGCAACGGCGAG
AGAAGAAGCCATCAATAGCTCAGATCGAGAGAGCATTTGGCGCTGGATCATATCGTGATTCTGAAGGGGA
AATGGATATGAATACAGTATTCGATGAGCTTCTTCTGGGTCATGCTAATAAGTTTGAAGGAAAGCTGGAG
AAGAAGCTACGAGAGGTTGGCGAAATGTTTGTAGACCTAACAGAGTCTAAGCTTCGTTCATCCGGGAAAC
CAGTTTTGCTGTTTACAATTCAATGGATACTTCCTATATGGATTGTGTCTCTGCTTTTGGCTTGTGGAAT
TATCAAACTTCCCTTTAGCCTCCCTTTACTTGATGACTTGATCATGTGATTGTACCTTTATACACACACC
ACATATTTACCATGATCACAATCACTTTTGTGTTTAGCCATCCATAATAATCTCAAAAGAAAGTGATTTA
TGTGAACATTTTTGTTAATCATAGTTAGAAAAATGTATACATAAACCCTATCCCACAAGAGAAATGTCAA
GAGG