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Detail for ZS11_C06G47500.t1

Genome:
ZS11: ZS11_C06G47500.t1
ZS11_v0: BnaC05T0146900ZS
WE: WE_C06G48840.t1
WE_v0: BnaA06T0117100WE
Darmor: C05p15780.1_BnaDAR
BH: BnaC06T417900BH
Quinta: BnaA06T0116400QU
ZS2: BnaC06T381900ZS2
SW: BnaC06T410200SW
Express61: C05p013840.1_BnaEXP
Xiaoyun: BnaC05G0140600XY
P202: BnaC06G072160P202.1
BL: BnaC06T417900BH
TA: BnaC06T386300TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g09670D
RB: BnaC06T404800RB
No2127: BnaC06T0370600NO
P130: BnaC05G013680P130.1
Length: 203
KOG ID: KOG2435
KOG E-value: 7.660000e-136
KOG Score: 380.0
KOG Annotation: Function unknown
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K18159 NDUFAF1, CIA30; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
NR Protein: XP_013701076.1
NR E-value: 1.600000e-117
NR Score: 427.2
NR Annotation: XP_013701076.1 probable complex I intermediate-associated protein 30 isoform X1 [Brassica napus]
SwissProt Protein: Q9LQI7|CIA30_ARATH
SwissProt E-value: 1.450000e-124
SwissProt Score: 353.0
SwissProt Annotation: Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana OX=3702 GN=At1g17350 PE=1 SV=2
CDS Sequence (620 bp)
ATGCTACCGCCTGTGGAGAAGTGTATATTCAAGTTCAGTTCAAAAGAAGACCTGAAGAGATGGCACCTGT
ATTCTGATTCTGAGTATGGAGGATTGTCTTCGGCTTCATTGGAGATTAAAGATGGAGGAAATGGATCAGA
TTGCACTGGTGTTTTCTCGGGGAGCCTCTTTACGGAGATTAGCGAAGGTTCAAAATTGAGTATTAACCGG
AGTGGTTTCTGTGGAATGCGCTCAAAGAAGTTTGATGGGTTTATTGATCTCGACGGGTATGATTCAATAG
CCATGAGGCTTAAAGGAGATGGAAGATGCTACATCTCTACTATATATACTGAGAATTGGGTAAACTCGCC
AGGACAAGCAGAAGATAACTCATGGCAAGCTTTTGTATTTGCTCCAAAGGGAAACTGGTATACAGCTAAG
GTTCCTCTAACTCGCTACTTGCCAACATGGAAAGGAAACGTGATAGATGCAGACATGGAGATGAATCCAG
GCCGTGTTGTGGGTATGTCTCTGTCAGTTAACTCACAAGGAGGTGGTTTTATTGGAGCTAAGTTAGGCGC
AGGCGATTTCAGAGTCGAAATTGACTGGATCAAAGCATTGAGAATGCCATGA
Upstream Sequence
ATGCTACCGCCTGTGGAGAAGTGTATATTCAAGTTCAGTTCAAAAGAAGACCTGAAGAGATGGCACCTGT
ATTCTGATTCTGAGTATGGAGGATTGTCTTCGGCTTCATTGGAGATTAAAGATGGAGGAAATGGATCAGA
TTGCACTGGTGTTTTCTCGGGGAGCCTCTTTACGGAGATTAGCGAAGGTTCAAAATTGAGTATTAACCGG
AGTGGTTTCTGTGGAATGCGCTCAAAGAAGTTTGATGGGTTTATTGATCTCGACGGGTATGATTCAATAG
CCATGAGGCTTAAAGGAGATGGAAGATGCTACATCTCTACTATATATACTGAGAATTGGGTAAACTCGCC
AGGACAAGCAGAAGATAACTCATGGCAAGCTTTTGTATTTGCTCCAAAGGGAAACTGGTATACAGCTAAG
GTTCCTCTAACTCGCTACTTGCCAACATGGAAAGGAAACGTGATAGATGCAGACATGGAGATGAATCCAG
GCCGTGTTGTGGGTATGTCTCTGTCAGTTAACTCACAAGGAGGTGGTTTTATTGGAGCTAAGTTAGGCGC
AGGCGATTTCAGAGTCGAAATTGACTGGATCAAAGCATTGAGAATGCCATGA
Downstream Sequence
GGTACTTAAAACACAGGTTCAGGCATCTGCTCATATTTGATGTTGCAGAACATATGTCCT
GCTTAAGAAAATTTTCTTTTACATTCATTCCTCTTTGATTCATATAAACAACTATTGAGA
CGAAATAAGATATCTGAATATCTGCTGTACATACATAGCAATTCTTCATGTGCTCTGCTA
ATTATCGTGTTGGATATTTACTATGTAGGATTGTCTTCGGCTTCATTGGAGATTAAAGAT
GGAGGAAATGGATCAGATTGCACTGGTTAGCGTTATATAGTGGTCAATTGTGCTTAGCCT
TTTCCTTTTGTTGCTCTTTTGCTTGGTTCTGATACACCCAGTTTGTGTAAGATACATTTT
TCAAATAGACTTGTCGTTTGCTCATAAATGGAGGCATGTACATGTTAATAGAGATTCACA
ACACCCTTTTTCTTGATATCTTGATCTGCAATTTGTTTGGTTTTTAGCCGTTTAGGTTCT
TTTATGCGTCTCTGATGAAATTACATGCATGGAAATGAATATATGAGGTTTCTTGATTCT
TGTACCATTGCTTCCAAGTCTCATCATTCTTGTTTCTGCAATTGGGCTGACCATTTTCAC
CGTGTACCTCTTCCTTAGGTGTTTTCTCGGGGAGCCTCTTTACGGAGATTAGCGAAGGTT
CAAAATTGAGTATTAACCGGAGTGGTTTCTGTGGAATGCGCTCAAAGAAGGTTAAACACA
TACCCTTTTTTCTTACTAATCATCAAATGTCAATCAAAACCAAATATCAGAGTGGGTTCA
CGCTCAACTTAACTAAACCACTTCCGCCTTTCTGTAGTTTGATGGGTTTATTGATCTCGA
CGGGTATGATTCAATAGCCATGAGGCTTAAAGGAGATGGAAGATGCTACATCTCTACTGT
GAGTCTGATGTCTCAACACAAAGTTCATAGGAGCACATCTTTGTTTCTTAAACTAAACCG
TGATTTGAATTCAGATATATACTGAGAATTGGGTAAACTCGCCAGGACAAGCAGAAGATA
ACTCATGGCAAGCTTTTGTATTTGCTCCAAAGGGAAACTGGTATACAGCTAAGGCAAGTC
TCAGACTTCTTCGACAAGGCAACTTGCGTAAAAAGAGGTTTTGTTATATAAACCTAACCC
AAGCTTGACAATTTTTCTTTTTCAGGTTCCTCTAACTCGCTACTTGCCAACATGGAAAGG
AAACGTGATAGATGCAGACATGGAGATGAATCCAGGCCGTGTTGTGGGTATGTCTCTGTC
AGTTAACTCACAAGGAGGTGGTTTTATTGGAGCTAAGTTAGGCGCAGGCGATTTCAGAGT
CGAAATTGACTGGATCAAAGCATTGAGAATGCCATGATGAATGATGCCGACAAAAAGAAA
CTGAAGTTCTCTGGTTTGGTTTACTATTAAACCCGGGATTTGGGTTAACCGGATCGAATT
TGGTGGACAAAAGGAAAACGTTTGTGAAATGACAACACTTACAAGTTACAGCAAGTTGTC
TTGGCTTTAGTAGAACATAAAAGTCAATGAATAAAATTACATGGGCCATTTTAAGCAAGT
TGCTCAATTTGATCAAAACTGAGACAGTTACACAAAGAGACACATTGTATGTTTGTTTCT
CGGTGGAAGACACAATGTGAGTTTGGCACACATTCCTTTCACTTTATCCCGCCAGCTGTC
TTTTATTGCCCAGAACTACCCTTGGTTGTTGTAAAGAGAGTGTTAGCTTTTTAGAAGTCT
TGTTTCTTTCTTTGTAACTATATTACGGTTCAGTTGTAATAAATGTAAAGGTATATTGGA
TACAGCTAATGGGTTTTATGTTGGATGGTGCAGTCATGGATGGAAGATATGTGAACGTGT
GGACGAAGCTTTGTGGACGAGATTTTTAATCTTACAAGAGTTTTGTAGACTAGATTTCGT
GGACGAAGTCTTGTGGATGGTTTTAGTGGATTATAAGTTCATCATTTTCATAAAAAGATG
ATCAAACTTTTCTTTCATAT
Pro Sequence
MLPPVEKCIFKFSSKEDLKRWHLYSDSEYGGLSSASLEIKDGGNGSDCTG
VFSGSLFTEISEGSKLSINRSGFCGMRSKKFDGFIDLDGYDSIAMRLKGD
GRCYISTIYTENWVNSPGQAEDNSWQAFVFAPKGNWYTAKVPLTRYLPTW
KGNVIDADMEMNPGRVVGMSLSVNSQGGGFIGAKLGAGDFRVEIDWIKAL
RMP
mRNA Sequence
ATGCTACCGCCTGTGGAGAAGTGTATATTCAAGTTCAGTTCAAAAGAAGACCTGAAGAGATGGCACCTGT
ATTCTGATTCTGAGTATGGAGGATTGTCTTCGGCTTCATTGGAGATTAAAGATGGAGGAAATGGATCAGA
TTGCACTGGTGTTTTCTCGGGGAGCCTCTTTACGGAGATTAGCGAAGGTTCAAAATTGAGTATTAACCGG
AGTGGTTTCTGTGGAATGCGCTCAAAGAAGTTTGATGGGTTTATTGATCTCGACGGGTATGATTCAATAG
CCATGAGGCTTAAAGGAGATGGAAGATGCTACATCTCTACTATATATACTGAGAATTGGGTAAACTCGCC
AGGACAAGCAGAAGATAACTCATGGCAAGCTTTTGTATTTGCTCCAAAGGGAAACTGGTATACAGCTAAG
GTTCCTCTAACTCGCTACTTGCCAACATGGAAAGGAAACGTGATAGATGCAGACATGGAGATGAATCCAG
GCCGTGTTGTGGGTATGTCTCTGTCAGTTAACTCACAAGGAGGTGGTTTTATTGGAGCTAAGTTAGGCGC
AGGCGATTTCAGAGTCGAAATTGACTGGATCAAAGCATTGAGAATGCCATGA