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Detail for ZS11_C06G49630.t1

Genome:
ZS11: ZS11_C06G49630.t1
ZS11_v0: BnaC06T0409700ZS
WE: WE_A07G30210.t1
WE_v0: BnaC06T0427200WE
Darmor: C06p48750.1_BnaDAR
BH: BnaC06T437900BH
Quinta: BnaC06T0397800QU
ZS2: BnaC06T401900ZS2
SW: BnaC06T432100SW
Express61: C06p037140.1_BnaEXP
Xiaoyun: BnaA07G0250200XY
P202: BnaC06G073640P202.2
BL: BnaC06T437900BH
TA: BnaC06T406200TA
Da-Ae: Not available
RB: BnaC06T423800RB
No2127: BnaC06T0401000NO
P130: BnaC06G050290P130.1
Length: 567
KOG ID: KOG1223
KOG E-value: Not available
KOG Score: 926.0
KOG Annotation: Amino acid transport and metabolism
Biological Process: GO:0009058(biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008909(isochorismate synthase activity)
KEGG Ortholog: K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
NR Protein: XP_013700626.1
NR E-value: Not available
NR Score: 1112.8
NR Annotation: XP_013700626.1 isochorismate synthase 1, chloroplastic [Brassica napus]
SwissProt Protein: Q9S7H8|ICS1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1013.0
SwissProt Annotation: Isochorismate synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ICS1 PE=1 SV=2
CDS Sequence (1728 bp)
ATGGCCTCACTTCAACTTTCTTCTCATTTTCTGGGCACAAACACTACAAAACACAACTCCATTTCCATCT
CTCATAACTATTCCCAAACCCCATTCACCAGATTATTCTCCCGCAAGAAGTTTATGTCGTGTTCCATGTC
TATGAATGGATGCGAGGGCGATTTCAAGACGCCACTTGGTACAATCGAGACAAGAACTATGGCGGCTGTT
TTATCTCCGACAGCAGCCACTGAGAGACTAATCTCCGCCGTCTCTGAGCTAAAATCTCAACCTCCGCCGT
TTTCCTCCGGCGTTGTCCGGATACAGGTGCCAATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAATC
CCAGAACGAGATCCACCTTCGCTGCTTCTTCTCTCGCCGCAGCGACGTTGGTCGTCCCGATCTTCTCCTC
GACTTGGCCAGCGATAACGGTAACGGAAGAGGCTCATCGGATCGTGAACTGGTTAGCGTCGCCGGAATCG
GATCCGCAGTGTTCTTCCGTGACCTAGATCCCTTCTCTCATGATGACTGGAGATCCATCCGAAGGTTTCT
GTCGTCTTCGTCGCCTCTGATCCGCGCCTATGGAGGCATGCGGTTTGATCCCAACGGCAAGATCTCTGTG
GAATGGGAACCCTTTGGTGCATTTTACTTTGCAGTGCCTCAGGTTGAGTTTAATGAGTTTGGGGGAAGCT
CGATGTTGGCTGCAACTCTTGCTTGGGATGATGAGCTCTCTTGGACGCTGGAGGATGCTATTGAAGCACT
TGAAGAGACTATGCTTCAGGTTTCTTCTGTTGTGATGAGGTTACGAAGGGAGTCTCTAGGAGTATCTGTT
CTTAGCAAGAACCATGTTCCTACCAAAGGAGCGTATTACCCTGCTGTAGAGAAGGCTTTGGAGATTATTA
AGCAAAAGAGTTCATCGCTTAGCAAGGTTGTGCTTGCTCGCAACAGCAGGATTATAACGGATACTGACAT
TGATCCCATCGCTTGGCTTGCTCAGTTACAGAGTGAAGGGCATGATGCTTATCAGTTCTGTCTGCAACCA
CCTGGTGCACCAGCTTTTATCGGCAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCTGCA
GTGAAGCTCTGGCTGCAACTAGGCCTCGATCTGCTTCAACGGCACGTGATATGGAGATAGAGCGTGACTT
ACTAACAAGCCCCAAAGACGACCTTGAGTTCTCTATTGTAAGAGAGAATATAAGAGAAAAGTTAAACTCT
ATATGTGACAAGGTGGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGCAGCATCTATATT
CTCAATTGGCAGGGAGGCTCAGGAGAGAAGATGACGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCC
AGCTGTTTGTGGGCTTCCAGCTGAAGAAGCCAGGCTTTTGATTAAGGAAATAGAATCTTTCGATAGAGGA
ATGTACGCTGGACCTATTGGATTTTTTGGTGGTAAAGAGAGTGAGTTTGCAGTTGGGATCAGATCAGCTC
TAGTCGAAAAGGGTCTTGGAGCATTGATTTATGCTGGGACAGGGATAGTAGCAGGAAGCAACCCAACCTC
AGAGTGGAATGAACTTGATCTAAAGATATCTCAGTTCACCAAGTCAATCGAGTGTGAGGCAACAACAACA
ACAACGCTGCAGATAATTAATTGA
Upstream Sequence
ATGGCCTCACTTCAACTTTCTTCTCATTTTCTGGGCACAAACACTACAAAACACAACTCCATTTCCATCT
CTCATAACTATTCCCAAACCCCATTCACCAGATTATTCTCCCGCAAGAAGTTTATGTCGTGTTCCATGTC
TATGAATGGATGCGAGGGCGATTTCAAGACGCCACTTGGTACAATCGAGACAAGAACTATGGCGGCTGTT
TTATCTCCGACAGCAGCCACTGAGAGACTAATCTCCGCCGTCTCTGAGCTAAAATCTCAACCTCCGCCGT
TTTCCTCCGGCGTTGTCCGGATACAGGTGCCAATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAATC
CCAGAACGAGATCCACCTTCGCTGCTTCTTCTCTCGCCGCAGCGACGTTGGTCGTCCCGATCTTCTCCTC
GACTTGGCCAGCGATAACGGTAACGGAAGAGGCTCATCGGATCGTGAACTGGTTAGCGTCGCCGGAATCG
GATCCGCAGTGTTCTTCCGTGACCTAGATCCCTTCTCTCATGATGACTGGAGATCCATCCGAAGGTTTCT
GTCGTCTTCGTCGCCTCTGATCCGCGCCTATGGAGGCATGCGGTTTGATCCCAACGGCAAGATCTCTGTG
GAATGGGAACCCTTTGGTGCATTTTACTTTGCAGTGCCTCAGGTTGAGTTTAATGAGTTTGGGGGAAGCT
CGATGTTGGCTGCAACTCTTGCTTGGGATGATGAGCTCTCTTGGACGCTGGAGGATGCTATTGAAGCACT
TGAAGAGACTATGCTTCAGGTTTCTTCTGTTGTGATGAGGTTACGAAGGGAGTCTCTAGGAGTATCTGTT
CTTAGCAAGAACCATGTTCCTACCAAAGGAGCGTATTACCCTGCTGTAGAGAAGGCTTTGGAGATTATTA
AGCAAAAGAGTTCATCGCTTAGCAAGGTTGTGCTTGCTCGCAACAGCAGGATTATAACGGATACTGACAT
TGATCCCATCGCTTGGCTTGCTCAGTTACAGAGTGAAGGGCATGATGCTTATCAGTTCTGTCTGCAACCA
CCTGGTGCACCAGCTTTTATCGGCAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCTGCA
GTGAAGCTCTGGCTGCAACTAGGCCTCGATCTGCTTCAACGGCACGTGATATGGAGATAGAGCGTGACTT
ACTAACAAGCCCCAAAGACGACCTTGAGTTCTCTATTGTAAGAGAGAATATAAGAGAAAAGTTAAACTCT
ATATGTGACAAGGTGGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGCAGCATCTATATT
CTCAATTGGCAGGGAGGCTCAGGAGAGAAGATGACGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCC
AGCTGTTTGTGGGCTTCCAGCTGAAGAAGCCAGGCTTTTGATTAAGGAAATAGAATCTTTCGATAGAGGA
ATGTACGCTGGACCTATTGGATTTTTTGGTGGTAAAGAGAGTGAGTTTGCAGTTGGGATCAGATCAGCTC
TAGTCGAAAAGGGTCTTGGAGCATTGATTTATGCTGGGACAGGGATAGTAGCAGGAAGCAACCCAACCTC
AGAGTGGAATGAACTTGATCTAAAGATATCTCAGTTCACCAAGTCAATCGAGTGTGAGGCAACAACAACA
ACAACGCTGCAGATAATTAATTGA
Downstream Sequence
GTTTGTTTTCTCTCTGTCTCTTTTTTTTGTTGTGTTCTTATCTTTTCCGAAGGACATCAT
TGTTTGATTATCTGAGAAATGTCTTTGGACAAAATTGTAGAAGTTTATGTCGTGTTCCAT
GTCTATGAATGGATGCGAGGGCGATTTCAAGACGCCACTTGGTACAATCGAGACAAGAAC
TATGGCGGCTGTTTTATCTCCGACAGCAGCCACTGAGAGACTAATCTCCGCCGTCTCTGA
GCTAAAATCTCAACCTCCGCCGTTTTCCTCCGGCGTTGTCCGGATACAGGTACATGACTT
TCCTCTGTTTCTGTCAGTGAAAGATCAGATATCGCCACGTGGTCCTTCCGGATTGGGTTA
TGAGAGCATCTTTATCCATAGAAACCATTAGTGTTTCTTGATGATTATTTAAGTATACAA
AGTGTACTTAGTAGGCTTAAGAACTCTAGTTAAGAAATTGTTCAATTTTGTGCCTCCAAT
GCTAGATTTTTAATCAAGGGTTCTTAAAAAAAAAAATTCTATAAACTTTTTTTTTAAGAA
GAATCGTTCGGAGAAGATGAGAAAGAGAAATAACGAAGAAACATGAGAATCAAAGCTATA
GAAGATCATATCATTCAGTTCCACCTAGTAAACCAAAGCAATTGTTCAAACACTTTTACC
TCATGGATAAGCTTCGTTGAACGCGAAGACGTCCTCGACGAGAAATCTTCCCGCTCCACC
AGACCACACGGAGGGCACGCATCACAGCGTCGAGAGCCACTCCAGAACCAGTGGCTCCAC
CGCCAATGACGAGTACATCGAGAGGATTAGAGGCGCTGGCTCCGATCAGAACCGACTCTT
GATTAGAGGAGTGGAGAAGACGAAGAAAGAAAGAATTAATGAGATGAAGAAAAATAAAAA
ACATAAAAATTCCAACTTTTACTCCTAGGCTGACACGTGTCTTTGGAAACCTCTTTCAAA
ACGGTTCCGAAAATCTCCAATTAAGGATCGGTTACAGTCTATTTATTTTTTTTTCATTTA
ATTAAATGGTCTATTATCCTAAAAACCCATCCAGAGAAACTGAGATAAAGATGCTCTGAT
GATATCGTTCTCTAGATCGTTCCTTGACGTATCGTTATGCCTAATCATTTAAATTTATTT
TTAATAAGAGTTGACTCATTTAGTTTAAAAAAAAAAAAATAAGAATGCACATATCATTTT
CCACTTGCTTTAGCTCTAGTAATTACGTAGTTTTTTTTTCTCATTTTCATCGACGGTAGG
GTCGTCAAATGACATCGGTATTAACCTCATCATTAGTACAAATTCTGGTTATGAATCATA
AACAAGCTCTGAAAGACAGTGGCTAATAATAACCAAGACTACAACTCCCTATGTGCCTAA
ATATAAAACAAAACTAATTTTTGTCTATAAAATATCATTAAAACTATAAATTAATGGTAT
TCAACCAATTACAAAATAGACTATTAAAATATGATTGAATACATAGTTTTTAATAAAATA
AAATTTATCTAAAAAAATGAAAACAtcttatatattAGAACATCAAAATTTTGTAAAACA
TTCTACGTTTAGGAACAGAGGAGTATTAAACACTAATTCTAAGTTGAGTCGTACCTTTCC
TTTTTAAGTCAATTAAATGTTGACCAAGTACAGAGTTGACCTAAAGCAGTCATAAGTAAG
AAAAGATTAACGACTGTTCTAATCAAGTTCAACACTGTTAATTAGATTTGATGACTAGTT
AGGTGTCTAGAGATATTAAGCTGGAGGAAAAAAAAAGAGATTAATGATGATTTAAAGATT
CATGTTGGGAGCAATCACTCACTCACACATTAATTAACAGTCATATATTTTTCCCGCGCA
AATTCTCAGGAACCTTAATTGAATTCGGTTTGGTTCGGTTCGGTTTAGGTGCCAATTGAC
CAGCAAATCGGAGCAATCGATTGGCTTCAATCCCAGAACGAGATCCACCTTCGCTGCTTC
TTCTCTCGCCGCAGCGACGT
Pro Sequence
MASLQLSSHFLGTNTTKHNSISISHNYSQTPFTRLFSRKKFMSCSMSMNG
CEGDFKTPLGTIETRTMAAVLSPTAATERLISAVSELKSQPPPFSSGVVR
IQVPIDQQIGAIDWLQSQNEIHLRCFFSRRSDVGRPDLLLDLASDNGNGR
GSSDRELVSVAGIGSAVFFRDLDPFSHDDWRSIRRFLSSSSPLIRAYGGM
RFDPNGKISVEWEPFGAFYFAVPQVEFNEFGGSSMLAATLAWDDELSWTL
EDAIEALEETMLQVSSVVMRLRRESLGVSVLSKNHVPTKGAYYPAVEKAL
EIIKQKSSSLSKVVLARNSRIITDTDIDPIAWLAQLQSEGHDAYQFCLQP
PGAPAFIGNTPERLFQRNQLGVCSEALAATRPRSASTARDMEIERDLLTS
PKDDLEFSIVRENIREKLNSICDKVVVKPQKTVRKLARVQHLYSQLAGRL
RREDDEFDILAALHPTPAVCGLPAEEARLLIKEIESFDRGMYAGPIGFFG
GKESEFAVGIRSALVEKGLGALIYAGTGIVAGSNPTSEWNELDLKISQFT
KSIECEATTTTTLQIIN
mRNA Sequence
ATGGCCTCACTTCAACTTTCTTCTCATTTTCTGGGCACAAACACTACAAAACACAACTCCATTTCCATCT
CTCATAACTATTCCCAAACCCCATTCACCAGATTATTCTCCCGCAAGAAGTTTATGTCGTGTTCCATGTC
TATGAATGGATGCGAGGGCGATTTCAAGACGCCACTTGGTACAATCGAGACAAGAACTATGGCGGCTGTT
TTATCTCCGACAGCAGCCACTGAGAGACTAATCTCCGCCGTCTCTGAGCTAAAATCTCAACCTCCGCCGT
TTTCCTCCGGCGTTGTCCGGATACAGGTGCCAATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAATC
CCAGAACGAGATCCACCTTCGCTGCTTCTTCTCTCGCCGCAGCGACGTTGGTCGTCCCGATCTTCTCCTC
GACTTGGCCAGCGATAACGGTAACGGAAGAGGCTCATCGGATCGTGAACTGGTTAGCGTCGCCGGAATCG
GATCCGCAGTGTTCTTCCGTGACCTAGATCCCTTCTCTCATGATGACTGGAGATCCATCCGAAGGTTTCT
GTCGTCTTCGTCGCCTCTGATCCGCGCCTATGGAGGCATGCGGTTTGATCCCAACGGCAAGATCTCTGTG
GAATGGGAACCCTTTGGTGCATTTTACTTTGCAGTGCCTCAGGTTGAGTTTAATGAGTTTGGGGGAAGCT
CGATGTTGGCTGCAACTCTTGCTTGGGATGATGAGCTCTCTTGGACGCTGGAGGATGCTATTGAAGCACT
TGAAGAGACTATGCTTCAGGTTTCTTCTGTTGTGATGAGGTTACGAAGGGAGTCTCTAGGAGTATCTGTT
CTTAGCAAGAACCATGTTCCTACCAAAGGAGCGTATTACCCTGCTGTAGAGAAGGCTTTGGAGATTATTA
AGCAAAAGAGTTCATCGCTTAGCAAGGTTGTGCTTGCTCGCAACAGCAGGATTATAACGGATACTGACAT
TGATCCCATCGCTTGGCTTGCTCAGTTACAGAGTGAAGGGCATGATGCTTATCAGTTCTGTCTGCAACCA
CCTGGTGCACCAGCTTTTATCGGCAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCTGCA
GTGAAGCTCTGGCTGCAACTAGGCCTCGATCTGCTTCAACGGCACGTGATATGGAGATAGAGCGTGACTT
ACTAACAAGCCCCAAAGACGACCTTGAGTTCTCTATTGTAAGAGAGAATATAAGAGAAAAGTTAAACTCT
ATATGTGACAAGGTGGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGCAGCATCTATATT
CTCAATTGGCAGGGAGGCTCAGGAGAGAAGATGACGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCC
AGCTGTTTGTGGGCTTCCAGCTGAAGAAGCCAGGCTTTTGATTAAGGAAATAGAATCTTTCGATAGAGGA
ATGTACGCTGGACCTATTGGATTTTTTGGTGGTAAAGAGAGTGAGTTTGCAGTTGGGATCAGATCAGCTC
TAGTCGAAAAGGGTCTTGGAGCATTGATTTATGCTGGGACAGGGATAGTAGCAGGAAGCAACCCAACCTC
AGAGTGGAATGAACTTGATCTAAAGATATCTCAGTTCACCAAGTCAATCGAGTGTGAGGCAACAACAACA
ACAACGCTGCAGATAATTAATTGA