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Detail for ZS11_C06G49800.t1

Genome:
ZS11: ZS11_C06G49800.t1
ZS11_v0: BnaC06T0411000ZS
WE: WE_C06G51050.t1
WE_v0: BnaA07T0344900WE
Darmor: A07p40510.1_BnaDAR
BH: BnaC06T439400BH
Quinta: BnaC06T0399200QU
ZS2: BnaC06T403500ZS2
SW: BnaC06T433600SW
Express61: C06p037280.1_BnaEXP
Xiaoyun: BnaA07G0354700XY
P202: BnaC06G073770P202.1
BL: BnaC06T439400BH
TA: BnaC06T407400TA
Da-Ae: Not available
RB: BnaC06T425300RB
No2127: BnaC06T0402400NO
P130: BnaC06G050410P130.1
Length: 156
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: -
Cellular Component: GO:0005886(plasma membrane)
Molecular Function: GO:0016655(oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor)
KEGG Ortholog: -
NR Protein: XP_013700642.1
NR E-value: 1.300000e-79
NR Score: 300.8
NR Annotation: XP_013700642.1 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Brassica napus]
SwissProt Protein: Q9S829|NDHO_ARATH
SwissProt E-value: 1.390000e-88
SwissProt Score: 258.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhO PE=2 SV=1
CDS Sequence (477 bp)
ATGGCATTCTCAGCAACTCTGTCTCAGCTTTCTTCTCTTTCGACAATCTCCTCCTCACTCCCACTTTCTT
CTAGAATCTTCCCTCTTCGATCTCAGACTCATTTCAGAGTCAAAGCAGAGGCAGAGAAACAGAGCACGCA
GGCTAAATCCGAAGGGGAAGCTTCACCAGCTGCAACCAAAACCCCTAAAACTCTTCCCAAGAAACCGGTT
TACTCGATGAAGAAGGGTCAAATCGTTCGTGTAGACAAGGAGAAGTACCTCAACAGCATCAATTACTTAT
CAGTTGGTCATCCTCCTTTCTACAAAGGACTTGATTACATCTACGAAGATCGCGGCGAGGTACTAGACAT
TCGTGTCTTTGAGACAGGAGAGTATGCACTTGTTGGATGGGTTGGTATCCCAACCGCACCGGCTTGGCTA
CCAACAGATATGCTCATCAAGTCTGAGAAACTTGTTTACGAGAGACTATAG
Upstream Sequence
TCTTAACAACAACACACAGAGAAATTTTCTTGGTGGTCTCTCCAATGGCATTCTCAGCAACTCTGTCTCA
GCTTTCTTCTCTTTCGACAATCTCCTCCTCACTCCCACTTTCTTCTAGAATCTTCCCTCTTCGATCTCAG
ACTCATTTCAGAGTCAAAGCAGAGGCAGAGAAACAGAGCACGCAGGCTAAATCCGAAGGGGAAGCTTCAC
CAGCTGCAACCAAAACCCCTAAAACTCTTCCCAAGAAACCGGTTTACTCGATGAAGAAGGGTCAAATCGT
TCGTGTAGACAAGGAGAAGTACCTCAACAGCATCAATTACTTATCAGTTGGTCATCCTCCTTTCTACAAA
GGACTTGATTACATCTACGAAGATCGCGGCGAGGTACTAGACATTCGTGTCTTTGAGACAGGAGAGTATG
CACTTGTTGGATGGGTTGGTATCCCAACCGCACCGGCTTGGCTACCAACAGATATGCTCATCAAGTCTGA
GAAACTTGTTTACGAGAGACTATAGAGTCTTCAAGAAGATCATGTCTTCAAGAGTTTAACAAGTATCATA
ATGTTACC
Downstream Sequence
AGTCAGTTTCTTCACTTGTATTTCAAATGTTGAATCCAATAAACATTGATATTTGTTTTT
GAATTTTTGAAACAGTGAAGAAGGGTCAAATCGTTCGTGTAGACAAGGAGAAGTACCTCA
ACAGCATCAATGTAGGGTCTAATTTTTTCTCTGTTTTGATCGAAATCATGTTTTGTTCAT
TTGTTGTTGTCACAGTACTTATCAGTTGGTCATCCTCCTTTCTACAAAGGACTTGATTAC
ATCTACGAAGATCGCGGCGAGGTATAACTCGAATCCAATCCCCTTTATCGCCAAGAAGTT
TTAACTCAGTCTTGCTAAATCTTGCAGGTACTAGACATTCGTGTCTTTGAGACAGGAGAG
TATGCACTTGTAAGTTGCTTTGGCCACACACATTGTTTGTTCTGTTTCATTAGCCATACA
CATAAATAGTTTTATAAGCTAATGAATCACGAATTTTTTTATGGGTGATATTAGGTTGGA
TGGGTTGGTATCCCAACCGCACCGGCTTGGCTACCAACAGATATGCTCATCAAGGTACTT
AAAATTTATGAGAGCACATCAACAAAAAGTCACACTGTCCTTATAACAAAATCATGATTG
TTTTATGTGTTGTTGGTTCCTTGTGCAGTCTGAGAAACTTGTTTACGAGAGACTATAGAG
TCTTCAAGAAGATCATGTCTTCAAGAGTTTAACAAGTATCATAATGTTACCATAGTCAAA
AAAAAAAAAACTGTTGTGTAATGTAAAAAATGTAATGAGACTTGAGTTTTACAATAATGC
ATCTACCGTAGTTGCATCCCTATACCAGTCTAACACTCCTTTATTCCCTGAGATGACAAT
CTAAAACAAAACTGTTGTTCCTGATGAGAAACTGAGATACTAAAGTAAACAAAAAGTAAA
AGAAAAGGCTTGTCAACGTTTCATGAAAACTCTTTCTCTCTTAAGCTATGTCAAGTCCTT
TAAACGATGGAGACAAACGAACTGTGCCACGGCCACGCTGCTGGAAACTAACTTCCCTGC
TGTTGTGACTACTCGTCTGCTCATACTTGTTCCTGCAAGCTGGGCAACGTCCATCGTTCT
CATTGATCTGCTTATGGCAGAAGAGACACAGCCGAAACCCGCAAGGACATGGTAAGAAGC
TTAGATCCGTTACATCCATCTCTTCAGAGCAAATAGGACATTCACTTATCTCTTCATCAC
CACCGTCACCTTCTTTCTTCTGATCAGACTTTTTCTTCTTCTTATTCTTCTTTTTGTGAT
GAATCGCCTTCTCTGGTGAAGCTTCTTGCTTGCACTTGCCTTTACGAGGAGAAGACTTCT
TCTTCCTCTGGCTATCTTCGTCGCTCTCAAAGCTGTTCAAGGCATCGCTAAAGTCTTCCC
AGTTGTCATACGCATCATCAAAAGCGTCTTCTTCCTCTTCCTCGGTGATCTGATTAGAAC
AGCAGAAGCAGCCGTGCACGCTCTTATTAGTATCGGAATCTTTGTTCTTGAGGACACTAG
TGGGGCTACTAGCAGAGAGATCAGTCTCATCGTCATCACTATCATCATAGCATCGTAGTC
CATCATGATGATCATCAATACTCCAAGATTCAAGGTAAGAAACTCTATCATTTACTGTTT
TTCTATCAGTCAGCTTGTCACGCAAAGATCTCATCCCTGCTTCACCTACGCTTGCTCTCT
TCCCTGACCATTTTTCACAAAAATTCATCATTAATAAAATTGATTAAAAAAAAAACTGAA
AAAGAGAAGATGCCACGTGTTGTACATTGGTAAATCCATTGCCTGCGACGAGCATCGATC
TTCCACTGCTTCAGCTTCCAAAACCAATTCGCCTGCAAACATAGATTCAACGTATACGTA
AATAAACGTTACATAGGTTATATACACATCCGTGACGATTCATCAGCAAGAGTTTGCCTT
CATCTAATATATAAAGGGTTATGGTCAATCCACTAATCACCGATTAGTTTTAAATTGAAA
GCCATTAATAAAATAAACCC
Pro Sequence
MAFSATLSQLSSLSTISSSLPLSSRIFPLRSQTHFRVKAEAEKQSTQAKS
EGEASPAATKTPKTLPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPF
YKGLDYIYEDRGEVLDIRVFETGEYALVGWVGIPTAPAWLPTDMLIKSEK
LVYERL
mRNA Sequence
TCTTAACAACAACACACAGAGAAATTTTCTTGGTGGTCTCTCCAATGGCATTCTCAGCAACTCTGTCTCA
GCTTTCTTCTCTTTCGACAATCTCCTCCTCACTCCCACTTTCTTCTAGAATCTTCCCTCTTCGATCTCAG
ACTCATTTCAGAGTCAAAGCAGAGGCAGAGAAACAGAGCACGCAGGCTAAATCCGAAGGGGAAGCTTCAC
CAGCTGCAACCAAAACCCCTAAAACTCTTCCCAAGAAACCGGTTTACTCGATGAAGAAGGGTCAAATCGT
TCGTGTAGACAAGGAGAAGTACCTCAACAGCATCAATTACTTATCAGTTGGTCATCCTCCTTTCTACAAA
GGACTTGATTACATCTACGAAGATCGCGGCGAGGTACTAGACATTCGTGTCTTTGAGACAGGAGAGTATG
CACTTGTTGGATGGGTTGGTATCCCAACCGCACCGGCTTGGCTACCAACAGATATGCTCATCAAGTCTGA
GAAACTTGTTTACGAGAGACTATAGAGTCTTCAAGAAGATCATGTCTTCAAGAGTTTAACAAGTATCATA
ATGTTACC