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Detail for ZS11_C07G27120.t1

Genome:
ZS11: ZS11_C07G27120.t1
ZS11_v0: BnaC07T0211500ZS
WE: WE_C07G27290.t1
WE_v0: BnaA07T0139900WE.1
Darmor: C07p25030.1_BnaDAR
BH: BnaC07T221400BH
Quinta: BnaC07T0192100QU
ZS2: BnaC07T190800ZS2
SW: BnaC07T221100SW
Express61: C07p009300.1_BnaEXP
Xiaoyun: BnaC07G0221800XY
P202: BnaC07G060090P202.1
BL: BnaC07T221400BH
TA: BnaA07T144900TA
Da-Ae: Not available
RB: BnaC07T225300RB
No2127: BnaC07T0206000NO
P130: BnaC07G029570P130.7
Length: 627
KOG ID: KOG2403
KOG E-value: Not available
KOG Score: 1219.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0022900(electron transport chain),GO:0006099(tricarboxylic acid cycle)
Cellular Component: -
Molecular Function: GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors),GO:0050660(flavin adenine dinucleotide binding),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K00234 SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
NR Protein: XP_013598748.1
NR E-value: Not available
NR Score: 1270.0
NR Annotation: XP_013598748.1 PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial isoform X1 [Brassica oleracea var. oleracea]
SwissProt Protein: O82663|SDHA1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1219.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1
CDS Sequence (1910 bp)
ATGTGGCGCTGCGTCTCTCGTAGCCTTCGTGCTCCTTCCTCAAGGACCTCACTCTCTGGATCTCGCTTTT
CTAGATTCCTCTCCACCGGTTCCCAGACAGGTGATTACACGATAGTGGATCACACCTATGACGCGGTGGT
TGTGGGAGCTGGTGGTGCTGGGCTAAGGGCGGCCATTGGATTATCTGAGCATGGATTTAACACGGCTTGC
ATCACCAAGCTCTTCCCCACACGCTCACACACCGTCGCTGCTCAGGGTGGTATTAATGCTGCACTGGGAA
ACATGTCTGAAGATGACTGGAGATGGCACATGTATGATACTGTCAAAGGAAGTGACTGGCTTGGTGATCA
AGATGCCATTCAGTATATGTGTAGAGAGGCACCAAAAGCAGTGATTGAACTTGAGAATTACGGCCTGCCC
TTTTCTCGTACTGAAGAGGGTAAAATTTACCAGCGTGCATTTGGTGGTCAGAGTCTTGACTTTGGCAAAG
GTGGTCAGGCCTATCGTTGTGCTTGTGCTGCGGATCGGACTGGGCATGCTCTCTTGCATACCTTATATGG
ACAAGCTATGAAGCATAACACACAGTTCTTTGTTGAATACTTCGCTCTGGATCTGCTCATGGCGAGTGAT
GGCACTTGCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCACCGTTTCCGCTCTGCACAAA
CAATCTTGGCCACTGGGGGTTACGGCAGAGCATACTTCTCTGCAACCTCAGCACATACATGCACAGGAGA
TGGCAATGCCATGGTTGCACGTGCTGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAGTTCCATCCAACT
GGTATTTACGGAGCCGGATGTCTCATCACTGAAGGATCCCGAGGTGAAGGTGGTATCCTTAGAAACAGTG
AAGGAGAACGTTTTATGGAACGATATGCTCCTACAGCCAAGGATCTTGCATCAAGAGATGTTGTCTCTAG
ATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGACCGCATAAGGATCATATCTATCTCCATTTG
AACCATCTCCCACCAGAAGTTCTAAAAGAAAGGCTTCCTGGAATATCTGAGACGGCTGCAATCTTCGCTG
GTGTTGATGTTACCAAAGAGCCAATTCCAGTCTTGCCTACTGTGCACTATAACATGGGTGGTATCCCAAC
AAATTACCACGGCGAGGTAGTGACCATCAAAGGAGATGATCCAGATGCAGTGGTTCCAGGGCTTATGGCT
GCTGGGGAGGCAGCTTGTGCATCTGTTCACGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGACATTG
TTGTGTTTGGCCGTGCTTGTGCGAATAGGGTAGCAGAGATAAGCAAACCAGGGGAGAAACAGAGGCCTCT
GGAGGAAAATGCAGGCAAGAAGACGATAGAATGGCTGAACAAGTTGAGACACTCAAGCGGGTCGCTTCCT
ACATCAAGTATCAGATTGAACATGCAGAGGATTATGCAGAACAACGCAGCTGTCTTCCGCACGCAAGAAA
CATTGGAAGAAGGTTGTCAGTTGATCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCG
GAGTTTGATATGGAACTCTGATCTGATAGAGACAATAGAACTGGAGAACCTATTGATAAACGCTTCAATA
ACAATGCATTCAGCGGAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAAGATTTCACGAAAAGAG
AGGATGGAGAATGGATGAAGCATACATTGGGGTATTGGGAAGACGAGAAAGTGAGGTTGGAGTATAGGCC
TGTTCACATGGACACTCTCGACGATGAGATTGACACTTTCCCTCCCAAAGCTCGCGTCTACTGA
Upstream Sequence
CTCTCACTCCGCTCGCGAGTTCTCAGGTAAACAAAAAAAGAAACGATTTCGTCTACCATCTTCATTTTGC
ATAGAATCTGATCGGCTTGTGGATTCAAAAAGAAGAAGATGTGGCGCTGCGTCTCTCGTAGCCTTCGTGC
TCCTTCCTCAAGGACCTCACTCTCTGGATCTCGCTTTTCTAGATTCCTCTCCACCGGTTCCCAGACAGGT
GATTACACGATAGTGGATCACACCTATGACGCGGTGGTTGTGGGAGCTGGTGGTGCTGGGCTAAGGGCGG
CCATTGGATTATCTGAGCATGGATTTAACACGGCTTGCATCACCAAGCTCTTCCCCACACGCTCACACAC
CGTCGCTGCTCAGGGTGGTATTAATGCTGCACTGGGAAACATGTCTGAAGATGACTGGAGATGGCACATG
TATGATACTGTCAAAGGAAGTGACTGGCTTGGTGATCAAGATGCCATTCAGTATATGTGTAGAGAGGCAC
CAAAAGCAGTGATTGAACTTGAGAATTACGGCCTGCCCTTTTCTCGTACTGAAGAGGGTAAAATTTACCA
GCGTGCATTTGGTGGTCAGAGTCTTGACTTTGGCAAAGGTGGTCAGGCCTATCGTTGTGCTTGTGCTGCG
GATCGGACTGGGCATGCTCTCTTGCATACCTTATATGGACAAGCTATGAAGCATAACACACAGTTCTTTG
TTGAATACTTCGCTCTGGATCTGCTCATGGCGAGTGATGGCACTTGCCAGGGTGTAATTGCACTAAACAT
GGAAGATGGAACATTGCACCGTTTCCGCTCTGCACAAACAATCTTGGCCACTGGGGGTTACGGCAGAGCA
TACTTCTCTGCAACCTCAGCACATACATGCACAGGAGATGGCAATGCCATGGTTGCACGTGCTGGTCTTC
CACTCCAGGACTTGGAGTTTGTTCAGTTCCATCCAACTGGTATTTACGGAGCCGGATGTCTCATCACTGA
AGGATCCCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGAGAACGTTTTATGGAACGATATGCTCCT
ACAGCCAAGGATCTTGCATCAAGAGATGTTGTCTCTAGATCTATGACTATGGAAATCAGGGAAGGTCGTG
GTGTAGGACCGCATAAGGATCATATCTATCTCCATTTGAACCATCTCCCACCAGAAGTTCTAAAAGAAAG
GCTTCCTGGAATATCTGAGACGGCTGCAATCTTCGCTGGTGTTGATGTTACCAAAGAGCCAATTCCAGTC
TTGCCTACTGTGCACTATAACATGGGTGGTATCCCAACAAATTACCACGGCGAGGTAGTGACCATCAAAG
GAGATGATCCAGATGCAGTGGTTCCAGGGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCTGTTCACGG
TGCCAACAGGCTTGGTGCAAATTCTCTCCTCGACATTGTTGTGTTTGGCCGTGCTTGTGCGAATAGGGTA
GCAGAGATAAGCAAACCAGGGGAGAAACAGAGGCCTCTGGAGGAAAATGCAGGCAAGAAGACGATAGAAT
GGCTGAACAAGTTGAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGATTGAACATGCAGAGGAT
TATGCAGAACAACGCAGCTGTCTTCCGCACGCAAGAAACATTGGAAGAAGGTTGTCAGTTGATCGACAAG
GCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCGGAGTTTGATATGGAACTCTGATCTGATAGAGA
CAATAGAACTGGAGAACCTATTGATAAACGCTTCAATAACAATGCATTCAGCGGAAGCACGAAAGGAAAG
CAGAGGAGCACATGCTCGGGAAGATTTCACGAAAAGAGAGGATGGAGAATGGATGAAGCATACATTGGGG
TATTGGGAAGACGAGAAAGTGAGGTTGGAGTATAGGCCTGTTCACATGGACACTCTCGACGATGAGATTG
ACACTTTCCCTCCCAAAGCTCGCGTCTACTGATTCCCTTCCCCCACAAACAAGCAAGCAGCAGCAGCGAT
ATGCTTTGTTATTTTTATTGTGTCAACTGAATAATAATAATACCAGGAGGATAAGAGAAAAGGGGATTAG
GAGAATAGACACAAAAAAATGAGTTTTTGCTATTTATTTTTGTGATGAGAGAAAGCTCATGTTTTGGAGG
ACAAAAACAGCTTTCGTCGTCTTCATCTTGTTTTTTACATTTGACACCAGAAAGTGTGTGTAATAAAATG
GTAAAAGACCGTTAAAATGTGTTCTGTATTCCCTTTTAACCAGTTCCTGAAACGTTGTCAAAAAA
Downstream Sequence
CGTAAGATCTCTCCTCCGATTCTTAGTTTTATCGTTTCGATCCTATGTAAATACGCGTGG
AATCTCGAGTAACAGAAGCTTATGATAGGGAACACGGAGTCCGTTGAGTTTTAGTATTGA
ATTTGATCGGGATTGCGTATTGTTAGAATTGCTTTTTTTGCTTATTCTTCGTATCCATGT
TGTTGATCATGCAGCAGACAGGTGATTACACGATAGTGGATCACACCTATGACGCGGTGG
TTGTGGGAGCTGGTGGTGCTGGGCTAAGGGCGGCCATTGGATTATCTGAGCATGGATTTA
ACACGGCTTGCATCACCAAGCTCTTCCCCACACGCTCACACACCGTCGCTGCTCAGGTTA
ATTTCGTTTTACCCTTCTGATTAGTAATGGAGTTTTGGTTTCTTTGAGATTTGATGAGCT
TTAATGTGATGTGGGGAAACTGTGAAGGGTGGTATTAATGCTGCACTGGGAAACATGTCT
GAAGATGACTGGAGATGGCACATGTATGATACTGTCAAAGGAAGTGACTGGCTTGGTAAT
CTTGCAACTCTTCTTTTTCTTTTGTATTAGCTTATTGCTCTTGCTAGTATGTGGTTCAGT
TGCTGTGCCTGCATTTAACAGTTTTTTGATTTTCTTTGTGTAGGTGATCAAGATGCCATT
CAGTATATGTGTAGAGAGGCACCAAAAGCAGTGATTGAACTTGAGAATTACGGCCTGCCC
TTTTCTCGTACTGAAGAGGGTAAAATTTACCAGCGTGCATTTGGTGGTCAGAGTCTTGAC
TTTGGCAAAGGTGACTTTGTCTAACGTCTTGCTACCTTTTTGATCATTTCATTTGATTTT
TTCATATGTGCTCTTGCTGGCTTTGTTTTGGGAACTTTGATTGTTTTAGTAGATTTTCTC
ATGTTGGCTTTCTTTTTATTCTACCGTCAGGTGGTCAGGCCTATCGTTGTGCTTGTGCTG
CGGATCGGACTGGGCATGCTCTCTTGCATACCTTATATGGACAAGCTATGAAGCATAACA
CACAGTTCTTTGTTGAATACTTCGCTCTGGATCTGCTCATGGCGAGTGATGGTAAGTGTT
TGGGAGTTATTTTCCTTTTTCTCTTGCTTCCGTTAGTATTGATGCAACATTGTTATCCGA
TCTGCAGGCACTTGCCAGGGTGTAATTGCACTAAACATGGAAGATGGAACATTGCACCGT
TTCCGCTCTGCACAAACAATCTTGGCCACTGGGGTGAGCTAGTTTTGAGTAGTTTTCATG
TTACGAATTTTTCCAATTGTGCAAGTTTACTCACATGATGCCTCTTTTTTTTTCCAGGGT
TACGGCAGAGCATACTTCTCTGCAACCTCAGCACATACATGCACAGGAGATGGCAATGCC
ATGGTTGCACGTGCTGGTCTTCCACTCCAGGTATGCTACCTATTTAGTTTTGAGATAAAT
GGTGCAAAACGTATCTGTATGCTAATAATATTATTGTCTGATTACGTCATATGCAGGACT
TGGAGTTTGTTCAGTTCCATCCAACTGGTATTTACGGAGCCGGATGTCTCATCACTGAAG
GTTAGCATCTTGTCCTCACATAGTCCATTTACTTACACGATAGAGATATAATGTGGTTGA
CATGGTTATTTTTGGTGTTTCTCTACTAAACAATTGCAGGATCCCGAGGTGAAGGTGGTA
TCCTTAGAAACAGTGAAGGAGAACGTTTTATGGAACGATATGCTCCTACAGCCAAGGATC
TTGCATCAAGAGATGTTGTCTCTAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTG
TAGGTATGCTAGATTCAACTTTCTCAGCTAACTCTCATTATGAGTCTTTGAGGACCATAA
TTGATTTCGTGATACTCTGTAGTCTTAATACTCGTTTTGGATTAACCGTTGCTAAAATGG
CCAGGACCGCATAAGGATCATATCTATCTCCATTTGAACCATCTCCCACCAGAAGTTCTA
AAAGAAAGGCTTCCTGGAAT
Pro Sequence
MWRCVSRSLRAPSSRTSLSGSRFSRFLSTGSQTGDYTIVDHTYDAVVVGA
GGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDW
RWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIY
QRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEY
FALDLLMASDGTCQGVIALNMEDGTLHRFRSAQTILATGGYGRAYFSATS
AHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGIL
RNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLHL
NHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYH
GEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRAC
ANRVAEISKPGEKQRPLEENAGKKTIEWLNKLRHSSGSLPTSSIRLNMQR
IMQNNAAVFRTQETLEEGCQLIDKAWESFEDVQVKDRSLIWNSDLIETIE
LENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDEK
VRLEYRPVHMDTLDDEIDTFPPKARVY
mRNA Sequence
CTCTCACTCCGCTCGCGAGTTCTCAGGTAAACAAAAAAAGAAACGATTTCGTCTACCATCTTCATTTTGC
ATAGAATCTGATCGGCTTGTGGATTCAAAAAGAAGAAGATGTGGCGCTGCGTCTCTCGTAGCCTTCGTGC
TCCTTCCTCAAGGACCTCACTCTCTGGATCTCGCTTTTCTAGATTCCTCTCCACCGGTTCCCAGACAGGT
GATTACACGATAGTGGATCACACCTATGACGCGGTGGTTGTGGGAGCTGGTGGTGCTGGGCTAAGGGCGG
CCATTGGATTATCTGAGCATGGATTTAACACGGCTTGCATCACCAAGCTCTTCCCCACACGCTCACACAC
CGTCGCTGCTCAGGGTGGTATTAATGCTGCACTGGGAAACATGTCTGAAGATGACTGGAGATGGCACATG
TATGATACTGTCAAAGGAAGTGACTGGCTTGGTGATCAAGATGCCATTCAGTATATGTGTAGAGAGGCAC
CAAAAGCAGTGATTGAACTTGAGAATTACGGCCTGCCCTTTTCTCGTACTGAAGAGGGTAAAATTTACCA
GCGTGCATTTGGTGGTCAGAGTCTTGACTTTGGCAAAGGTGGTCAGGCCTATCGTTGTGCTTGTGCTGCG
GATCGGACTGGGCATGCTCTCTTGCATACCTTATATGGACAAGCTATGAAGCATAACACACAGTTCTTTG
TTGAATACTTCGCTCTGGATCTGCTCATGGCGAGTGATGGCACTTGCCAGGGTGTAATTGCACTAAACAT
GGAAGATGGAACATTGCACCGTTTCCGCTCTGCACAAACAATCTTGGCCACTGGGGGTTACGGCAGAGCA
TACTTCTCTGCAACCTCAGCACATACATGCACAGGAGATGGCAATGCCATGGTTGCACGTGCTGGTCTTC
CACTCCAGGACTTGGAGTTTGTTCAGTTCCATCCAACTGGTATTTACGGAGCCGGATGTCTCATCACTGA
AGGATCCCGAGGTGAAGGTGGTATCCTTAGAAACAGTGAAGGAGAACGTTTTATGGAACGATATGCTCCT
ACAGCCAAGGATCTTGCATCAAGAGATGTTGTCTCTAGATCTATGACTATGGAAATCAGGGAAGGTCGTG
GTGTAGGACCGCATAAGGATCATATCTATCTCCATTTGAACCATCTCCCACCAGAAGTTCTAAAAGAAAG
GCTTCCTGGAATATCTGAGACGGCTGCAATCTTCGCTGGTGTTGATGTTACCAAAGAGCCAATTCCAGTC
TTGCCTACTGTGCACTATAACATGGGTGGTATCCCAACAAATTACCACGGCGAGGTAGTGACCATCAAAG
GAGATGATCCAGATGCAGTGGTTCCAGGGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCTGTTCACGG
TGCCAACAGGCTTGGTGCAAATTCTCTCCTCGACATTGTTGTGTTTGGCCGTGCTTGTGCGAATAGGGTA
GCAGAGATAAGCAAACCAGGGGAGAAACAGAGGCCTCTGGAGGAAAATGCAGGCAAGAAGACGATAGAAT
GGCTGAACAAGTTGAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGATTGAACATGCAGAGGAT
TATGCAGAACAACGCAGCTGTCTTCCGCACGCAAGAAACATTGGAAGAAGGTTGTCAGTTGATCGACAAG
GCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCGGAGTTTGATATGGAACTCTGATCTGATAGAGA
CAATAGAACTGGAGAACCTATTGATAAACGCTTCAATAACAATGCATTCAGCGGAAGCACGAAAGGAAAG
CAGAGGAGCACATGCTCGGGAAGATTTCACGAAAAGAGAGGATGGAGAATGGATGAAGCATACATTGGGG
TATTGGGAAGACGAGAAAGTGAGGTTGGAGTATAGGCCTGTTCACATGGACACTCTCGACGATGAGATTG
ACACTTTCCCTCCCAAAGCTCGCGTCTACTGATTCCCTTCCCCCACAAACAAGCAAGCAGCAGCAGCGAT
ATGCTTTGTTATTTTTATTGTGTCAACTGAATAATAATAATACCAGGAGGATAAGAGAAAAGGGGATTAG
GAGAATAGACACAAAAAAATGAGTTTTTGCTATTTATTTTTGTGATGAGAGAAAGCTCATGTTTTGGAGG
ACAAAAACAGCTTTCGTCGTCTTCATCTTGTTTTTTACATTTGACACCAGAAAGTGTGTGTAATAAAATG
GTAAAAGACCGTTAAAATGTGTTCTGTATTCCCTTTTAACCAGTTCCTGAAACGTTGTCAAAAAA