BrassicaPanDB

CDS Sequence (136 bp)

ATGGGTCAACTATTTGCTTCATTAGTTACAACAGTGGCACCTGCAGAATCCGCTATTGGATTAGCCATTT
TTTTTATAACTTTCCGAGTCCAAGAGACTTTTGTTGTAAAATTTATTAATAGCATTCAAGGATAA

Upstream Sequence

ATGGGTCAACTATTTGCTTCATTAGTTACAACAGTGGCACCTGCAGAATCCGCTATTGGATTAGCCATTT
TTTTTATAACTTTCCGAGTCCAAGAGACTTTTGTTGTAAAATTTATTAATAGCATTCAAGGATAA

Downstream Sequence

TATAAAATTATAGTAAAAAAAATGTTCTAACATGATATATATATGTATAGAGTAAATTAT
ATTTTCGGTAAATCATAGTCTAATAAATCAGCAAAAATATCTTTTAAAAATACAGTAACT
TTCTCTAACCATACAATAAATTAATTATATATAAGGAAGCCATTATTAAAACTATTCTAA
ATTTAATAAGTGAATTTTATTTTAGAAAACCTAATAAGTTATTGGGATAATATTTTTATT
AAGTCCATAAATATAATAATATATAAAATATTCAGTCATATATTTATTTAAATATTGATA
ATTAAAATTATGTTTTGATTCTCTTTTTTAAACAAATAATTTTCAATTAGGCTGAATTAT
ATATTCATGTTCAATTATTAAAATATGTAAAATAAACAAAAAATACAGGTACATTCGATA
TATACAAAATATAAAATAAACAATGTTTTGAGTATTAAACTTTACCACAACAATAAAAAC
GCAAATCTACTTACTATATATAAAATTTTGAGCAAACAATAAGGAAAATGTATACCATTT
TAATCATGAAAATCGTGTCATGCTAATATAAACTTTTAATATATAATAAGACGACTAAAT
AATAAATAATAAATAGGTTTAGTTTGATATATGCGAAGATGATATAAAATGTGTTCTCAT
TATAAAAACATTGCAAAAAATAAAAATAATAACTAAAATAGTATAATGTCATAAAATATA
TTTGACAACAAATAAAAAAAACAAAAACAAGTTAGAAAAATAAACGAACATCAAACAAAC
GTTAAGTAAATAAATATAATACCTCTCATCACTTAAAATTTTCTACAAGACAAAAATCAT
TATTATACACATCTCTTGCAAATGAAAATCTAAAACACAAACCATAAAATCATACAAAAA
ATAAAAATCTAGATAACAAGTAAAATATATCCCGCCCGTAGGGCGGGCCACCCCTAGTTT
ATTATATAGATATTTTTTTGTAAGGACATTTGATCATGTTGAGGTTTTCTAGAATTTAAC
AATATCTGGCTGCACTAATTTTTTATATTAAATCTACAATAAAAGATAATATTGAATACC
AAACAAAAGTCGTCGTAGTTAGGATATTTTAGATTTATTTATTTGTTTAGTTTTATTTTG
AATCAGAACTTTAGCTTCTTTCTTTCTTTCACTTAGGGAATATGCTTTGTAAATGAAACG
TATCAACTCTTCAATTACAAGGATATTTTCAGGAATATGTTGTTCAATTCCCCGAAAAAA
ATGATTTTTTAATCAATTCAATGTCTATGTATTGCGTAGAATGAATGACTTCCTTTTTCT
TTTTTTGAGCAACGAATGAATTCCTATTATGAAGAATTGTACGCACCATACAAATAGCTG
CCCAAAGGTTGAATGATTTAATGGAAAAAAACAAACAACCATACATATTAAAATAAAAAC
ACGTTTCCACTAAAAATCAAACCTAATCATTTTGGTGGTATATACAGAACATAGTCCTGA
TATAAAATAGTGCATTTCTATCCTACAACCAAACATCAGAAACATCTATTGCATCCTTCA
AGTTAATTTTAATCTTTTTTTCATTAACCATTCTGTTATTGTATTTGCAGCCTTGAACAG
GCATGTATATGCTTTTACACTGTCGAACGTTGTAGTCGTGTTTTTCTTATATTACTGGTT
ACCTGATGAGCAACGAGAGATTGATTAAAACCTCCTTGTCGTCCCCAATCTCCGACGACC
AGAATATTCAAAGAGCCATCGGATTTCGTCACCGGATGATCCAACCTTTCAAGCTTTGAC
AAAGAACCATTGAAGAAGATGCATAGAATAAGAAAAATCAAACGTACGCTGAACATCTTC
ATCTTAGTTCTTCTTAATTGTTTTCTCTGGTCTTAAGAAAATCAAGAAATCCAATGTTTA
TATTGAGAGAGAGAGAAGTCTAGGTGCCAATTAATATTAGATGAATTCGTAAGGAAATCA
TGGTCCATAAATTATTGAAG

Pro Sequence

MGQLFASLVTTVAPAESAIGLAIFFITFRVQETFVVKFINSIQG

mRNA Sequence

ATGGGTCAACTATTTGCTTCATTAGTTACAACAGTGGCACCTGCAGAATCCGCTATTGGATTAGCCATTT
TTTTTATAACTTTCCGAGTCCAAGAGACTTTTGTTGTAAAATTTATTAATAGCATTCAAGGATAA

Genome:
ZS11:	ZS11_C07G35080.t1
ZS11_v0:	BnaA10T0078100ZS
WE:	WE_C03G20670.t1
WE_v0:	BnaA10T0076800WE
Darmor:	C01p34800.1_BnaDAR
BH:	BnaC04T081000BH
Quinta:	BnaA04T0074500QU
ZS2:	BnaC04T077100ZS2
SW:	BnaC03T511000SW
Express61:	Not available
Xiaoyun:	BnaA04G0084100XY
P202:	Not available
BL:	BnaC04T081000BH
TA:	BnaC03T226000TA
Da-Ae:	Not available
RB:	BnaC04T076000RB
No2127:	BnaC01T0200600NO
P130:	Not available
Length:	44
KOG ID:	KOG4669
KOG E-value:	1.900000e-16
KOG Score:	67.4
KOG Annotation:	Energy production and conversion
Biological Process:	GO:0042773(ATP synthesis coupled electron transport)
Cellular Component:	-
Molecular Function:	GO:0016651(oxidoreductase activity, acting on NAD(P)H)
KEGG Ortholog:	K03882 ND4L; NADH-ubiquinone oxidoreductase chain 4L [EC:7.1.1.2]
NR Protein:	AKZ24826.1
NR E-value:	1.500000e-09
NR Score:	66.2
NR Annotation:	AKZ24826.1 NADH dehydrogenase subunit 4L (mitochondrion) [Plantago patagonica]
SwissProt Protein:	Q04614\|NU4LM_ARATH
SwissProt E-value:	5.010000e-15
SwissProt Score:	65.1
SwissProt Annotation:	NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L PE=2 SV=2

DETAIL

Detail for ZS11_C07G35080.t1

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