SEARCH

DETAIL

Detail for ZS11_A02G42990.t1

Genome:
ZS11: ZS11_A02G42990.t1
ZS11_v0: BnaA02T0358700ZS
WE: WE_A02G43860.t1
WE_v0: BnaA02T0356100WE
Darmor: A02p37170.1_BnaDAR
BH: BnaA06T345700BH
Quinta: BnaA02T0345500QU
ZS2: BnaA02T370800ZS2
SW: BnaA06T355800SW
Express61: A02p034780.1_BnaEXP
Xiaoyun: BnaA02G0360900XY
P202: Not available
BL: BnaA06T345700BH
TA: BnaA02T352200TA
Da-Ae: Not available
RB: BnaA06T346300RB
No2127: BnaA02T0350000NO
P130: Not available
Length: 98
KOG ID: KOG3446
KOG E-value: 3.180000e-58
KOG Score: 175.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03946 NDUFA2; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
NR Protein: XP_013693444.1
NR E-value: 8.900000e-50
NR Score: 201.1
NR Annotation: XP_013693444.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Brassica napus]
SwissProt Protein: Q9FIJ2|NDUA2_ARATH
SwissProt E-value: 1.350000e-57
SwissProt Score: 175.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=3 SV=1
CDS Sequence (301 bp)
ATGGCGTGGAGAGGAAACATATCGAAGTCTCTCAAAGAGCTCAGGATCCTTCTCTGTCAATCTTCCCCTG
CTAGCGCTTCCGCCAGGACGTTCGTGGAGAAGAATTACAGAGATTTGAAGACTCTAAACCCTAAGTTCCC
CTTCCTGATCCGCGAATGCAGTGGGATCCAGCCTCAGATGTGGGCACGATATGATATGGGAGTGGAGAGG
TGTGTAAACTTGGATGGGATGAGCGAGTCACAGATTCTCAAGTCTCTTGAAGACCTTGTCAAAGCCGGAG
GAGCTACAAAAGCCTAA
Upstream Sequence
CCATCACAAGCAGAGGTCTTTTGATTCTGTAAGGAGGAGGAAGAAGAGAAGAGCAATGGCGTGGAGAGGA
AACATATCGAAGTCTCTCAAAGAGCTCAGGATCCTTCTCTGTCAATCTTCCCCTGCTAGCGCTTCCGCCA
GGACGTTCGTGGAGAAGAATTACAGAGATTTGAAGACTCTAAACCCTAAGTTCCCCTTCCTGATCCGCGA
ATGCAGTGGGATCCAGCCTCAGATGTGGGCACGATATGATATGGGAGTGGAGAGGTGTGTAAACTTGGAT
GGGATGAGCGAGTCACAGATTCTCAAGTCTCTTGAAGACCTTGTCAAAGCCGGAGGAGCTACAAAAGCCT
AAGGTTACTTGTTTTGTTTTCCAGATGATCCCGAATAAAGCTTTAACTGGAAACACTCATTTGACACTTT
CCTGTCAATCTACTACCTATTACTTTCGTTTTGAGTTGTTTTTTTCTTAATGATGTCATCCTTGAACTTG
GTATACCTCAAACCATTTCCATATGATGATATGATTGAAATCATAAAGAAAAGAGGAGACAAACATAACA
ATTGTAGGCCATTTAAAG
Downstream Sequence
GTTTCGTTATCGTCTTTGATCGAATCAAATCCGTGAGATCCACGATTCAATTTGCGTATT
GGCTTCTTTGTTTTTGTTGCTGTTTCGATTCAGGACGTTCGTGGAGAAGAATTACAGAGA
TTTGAAGACTCTAAACCCTAAGTTCCCCTTCCTGATCCGCGAATGCAGTGGGATCCAGCC
TCAGATGTGGGCACGATATGGTAATCGGCTTTGATTATCTCTCATCTCTTGATTAGAGTT
TGAATATACACATTGGCACCAAGATTCAAAGCATTTGAATAGAGAACGTTTGGCTTGATT
ATGTTACAATGTAAATAGAGTAGAGAGGATCAGTGTGCTTCTTGGTTGTTGGTGATTGTG
AGCTGTAAGTTGTTTAAAGATTTGATATGAATGTGCTCATGCTAGTGACGATGAGAATGT
TATATGCATATTGGCTAGTGCTTCGTTTACATGAGTTGATTCTTGTGTGTAACCTCTAGG
GCCTTGGCAGCGCCGGTTCTGAGATTTGGGAGGCCATAGGCCATTTATTAAAGATTTCGA
GTAAAACTTTTTTTCCCTGACAAATTTGAGGGCCTAAGACTAATGTTTCATTTCGGCTTT
GCCCAGGACTTGGCTTAAAATGTAATGTTTGTAACCATCAATTAACTTGACATGATTTCT
GCTGAGTGATAGTTAAAGAATGGGACTTCTTTTTTTGTTTTTTTTAGTAGTTCCTTTTTG
TGTTTCATGTGAATGTTGCTCTTTTTTTTTTTTGAACTTTACGGTAAATTCACATATCAG
GGCCTTGAGCAGCTAAAAGCTTTCAGCCCCATCTCTGCTAAAAGAACTTGATCGTCTTTA
ATCTGTGTTTCCCACTGCCATCATATATCGAAGTAAAAATACAGGAAATCATGTATCGCT
TCTTGCATATAGAGAGATCTGTCGCCATGCAAGTGACATGTTTAGATTTTGAGATCAGAC
GCTTATGCTTTTAAGACTCGGCTCCTCATGGCTATTATTATTAAGGTTTAGCTGAAGGAT
GAAACATGATGCTTTCTTTTCGCTAATATACTTGTTTTAAATTTATCTTCTTGTAACCGA
CCTTGGCAACTAGTATTATCTAAATGTGTCGGTTTCACTAATTTGTGCTTGGGCTTGCAC
ACGCATACAATTGTGGCAGATATGGGAGTGGAGAGGTGTGTAAACTTGGATGGGATGAGC
GAGTCACAGATTCTCAAGTCTCTTGAAGACCTTGTCAAAGCCGGAGGAGCTACAAAAGCC
TAAGGTTACTTGTTTTGTTTTCCAGATGATCCCGAATAAAGCTTTAACTGGAAACACTCA
TTTGACACTTTCCTGTCAATCTACTACCTATTACTTTCGTTTTGAGTTGTTTTTTTCTTA
ATGATGTCATCCTTGAACTTGGTATACCTCAAACCATTTCCATATGATGATATGATTGAA
ATCATAAAGAAAAGAGGAGACAAACATAACAATTGTAGGCCATTTAAAGCAGTTATGGGT
ACTGTGAAGTGCGTTTCTGAATCATGGTTTCTCAGTTCTAGCCAAAATACTAACAATTCA
CGCTTGTAGCCCAAAATCGTTAGTTTGCTTGGATCAACATGAAATTGTAAATTTGCGTAA
GCTGCGACCATAGCAACTTCTCGAATCACCTAATAGGAAGGGAGCTGAAGAAGCGTACCA
TTACTTGTTGACAAGATCCAATCTTGTTAACGCAGGAGTTGATACGGTAAAGAAGATTTA
GCAGTACTATAGAAATCAATGTAGATAAACTAATTCCTCCTAATTACCGTATTGTTAAAC
GTGAGATCAGTGGTGATCTTTGACCATGTTTAGATATAAGCCGTCGTAGATGTAACTTGC
CAACCAAACCATGTCTAATACAGATACATCGTATGTTATAAAAGTTATTGGTATTGGAAG
ATTAACAAATACTTAAAACTTATGTTAAAAGGTTCTAGAAGCTAAAGACACTACCTAATG
TTTGAAAGAGGAGAGGGGGG
Pro Sequence
MAWRGNISKSLKELRILLCQSSPASASARTFVEKNYRDLKTLNPKFPFLI
RECSGIQPQMWARYDMGVERCVNLDGMSESQILKSLEDLVKAGGATKA
mRNA Sequence
CCATCACAAGCAGAGGTCTTTTGATTCTGTAAGGAGGAGGAAGAAGAGAAGAGCAATGGCGTGGAGAGGA
AACATATCGAAGTCTCTCAAAGAGCTCAGGATCCTTCTCTGTCAATCTTCCCCTGCTAGCGCTTCCGCCA
GGACGTTCGTGGAGAAGAATTACAGAGATTTGAAGACTCTAAACCCTAAGTTCCCCTTCCTGATCCGCGA
ATGCAGTGGGATCCAGCCTCAGATGTGGGCACGATATGATATGGGAGTGGAGAGGTGTGTAAACTTGGAT
GGGATGAGCGAGTCACAGATTCTCAAGTCTCTTGAAGACCTTGTCAAAGCCGGAGGAGCTACAAAAGCCT
AAGGTTACTTGTTTTGTTTTCCAGATGATCCCGAATAAAGCTTTAACTGGAAACACTCATTTGACACTTT
CCTGTCAATCTACTACCTATTACTTTCGTTTTGAGTTGTTTTTTTCTTAATGATGTCATCCTTGAACTTG
GTATACCTCAAACCATTTCCATATGATGATATGATTGAAATCATAAAGAAAAGAGGAGACAAACATAACA
ATTGTAGGCCATTTAAAG