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DETAIL

Detail for ZS11_C07G46430.t1

Genome:
ZS11: ZS11_C07G46430.t1
ZS11_v0: BnaC07T0373400ZS
WE: WE_C07G47420.t1
WE_v0: BnaC07T0367300WE
Darmor: C07p44260.1_BnaDAR
BH: BnaC07T395200BH
Quinta: BnaC07T0353500QU
ZS2: BnaC07T355000ZS2
SW: BnaC07T394700SW
Express61: C07p023790.1_BnaEXP
Xiaoyun: BnaC07G0394100XY
P202: BnaC07G081610P202.1
BL: BnaC07T395200BH
TA: BnaA06T282200TA
Da-Ae: Not available
RB: BnaC07T401100RB
No2127: BnaC07T0357200NO
P130: BnaC07G047520P130.4
Length: 459
KOG ID: KOG1436
KOG E-value: Not available
KOG Score: 826.0
KOG Annotation: Nucleotide transport and metabolism
Biological Process: GO:0006207('de novo' pyrimidine nucleobase biosynthetic process)
Cellular Component: GO:0016020(membrane),GO:0005737(cytoplasm)
Molecular Function: GO:0004152(dihydroorotate dehydrogenase activity),GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors)
KEGG Ortholog: K00254 DHODH, pyrD; dihydroorotate dehydrogenase [EC:1.3.5.2]
NR Protein: XP_013736880.1
NR E-value: 3.600000e-263
NR Score: 912.1
NR Annotation: XP_013736880.1 dihydroorotate dehydrogenase (quinone), mitochondrial [Brassica napus]
SwissProt Protein: P32746|PYRD_ARATH
SwissProt E-value: Not available
SwissProt Score: 872.0
SwissProt Annotation: Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PYRD PE=1 SV=2
CDS Sequence (1399 bp)
ATGGCTGGAAGAGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTGCTCAGAAGGAATCCTCTTG
GAGCGATTCGAAACTCTTCTTCTGCTGCTCCTGGCGCGGCTTCCTCTACACCTAAAGTCCCTCACTTTTC
CAAAAAAGGAAGGATATTGACAGGAGCCACCATTGGTCTTGCCATAGCTGGAGGAGCTTATGTCAGTACT
GCAGATGAAGCAACCTTCTGTGGGTGGCTGTTCTCAGCAACAAAGGTTGTTAACCCTCTCTTTGCTCTTC
TGGATGCTGAGTTTGCGCACAAGCTGGCCGTCACGGCTGCTGCTCGCGGGTGGGTGCCTAGAGAGAAGAG
GCCTGATCCACAGATCTTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGTCTTGCTGCT
GGATTCGACAAAAACGCTGAAGCCACAGAGGGATTGCTAGGACTTGGGTTTGGCTTTGTTGAGGTTGGCT
CTGTAACTCCAGTTCCACAAGAAGGCAACCCTAAGCCACGTATCTTCAGATTACGTGAAGATGGAGCCAT
TATCAATAGGTGTGGGTTTAACAGTGAAGGGATTGTTGTGGTTGCAAAGCGGTTGGGTGCTCAACATGGT
AAAAGAATGTTGGCGGAAACATCAGGCACTTCGTCATCTCCAGGTGATGAAGTTAAACCAGGGGGCAAAT
CCGGACCTGGTATACTTGGAGTCAACCTTGGAAAGAACAAGACAAGTGAAGATGCAGCTGCTGATTATGT
CCAGGGAGTTCATAACTTATCCCAATATGCTGATTACTTGGTTATAAATGTTTCATCACCCAACACAGCA
GGGCTGAGGATGCTTCAGGGGAGGAAACAGTTGAAGGACCTTGTAAAGAAGGTACAAGCTGCTAGGGATG
AGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTATCCAGAGGAGA
GCTTGAAGATATTGCAGCGGTTGCTCTTGCTCTCCACTTGGATGGGCTGATCATATCAAATACAACAGTC
TCGAGGCCAGATCCTGTAAGCAACAACCCAGTGGCAACAGAAACAGGTGGTTTGAGCGGGAAACCGCTCT
TTCCTCTCTCCACCAACATGTTGAGAGAGATGTACACCTTGACACGAGGAAAAATTCCACTGATAGGCTG
CGGTGGTGTTAGCAGTGGTGAGGATGCTTACAAGAAGATAAGAGCTGGAGCTACTCTTGTTCAGCTGTAC
ACTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAATAAAGGAGGAACTGGTGAGTTGCTTAGAAA
GGGACGGCTTCAAGTCGATCGAAGAAGCAATTGGTGCAGATCACCGATGA
Upstream Sequence
ATGGCTGGAAGAGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTGCTCAGAAGGAATCCTCTTG
GAGCGATTCGAAACTCTTCTTCTGCTGCTCCTGGCGCGGCTTCCTCTACACCTAAAGTCCCTCACTTTTC
CAAAAAAGGAAGGATATTGACAGGAGCCACCATTGGTCTTGCCATAGCTGGAGGAGCTTATGTCAGTACT
GCAGATGAAGCAACCTTCTGTGGGTGGCTGTTCTCAGCAACAAAGGTTGTTAACCCTCTCTTTGCTCTTC
TGGATGCTGAGTTTGCGCACAAGCTGGCCGTCACGGCTGCTGCTCGCGGGTGGGTGCCTAGAGAGAAGAG
GCCTGATCCACAGATCTTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGTCTTGCTGCT
GGATTCGACAAAAACGCTGAAGCCACAGAGGGATTGCTAGGACTTGGGTTTGGCTTTGTTGAGGTTGGCT
CTGTAACTCCAGTTCCACAAGAAGGCAACCCTAAGCCACGTATCTTCAGATTACGTGAAGATGGAGCCAT
TATCAATAGGTGTGGGTTTAACAGTGAAGGGATTGTTGTGGTTGCAAAGCGGTTGGGTGCTCAACATGGT
AAAAGAATGTTGGCGGAAACATCAGGCACTTCGTCATCTCCAGGTGATGAAGTTAAACCAGGGGGCAAAT
CCGGACCTGGTATACTTGGAGTCAACCTTGGAAAGAACAAGACAAGTGAAGATGCAGCTGCTGATTATGT
CCAGGGAGTTCATAACTTATCCCAATATGCTGATTACTTGGTTATAAATGTTTCATCACCCAACACAGCA
GGGCTGAGGATGCTTCAGGGGAGGAAACAGTTGAAGGACCTTGTAAAGAAGGTACAAGCTGCTAGGGATG
AGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTATCCAGAGGAGA
GCTTGAAGATATTGCAGCGGTTGCTCTTGCTCTCCACTTGGATGGGCTGATCATATCAAATACAACAGTC
TCGAGGCCAGATCCTGTAAGCAACAACCCAGTGGCAACAGAAACAGGTGGTTTGAGCGGGAAACCGCTCT
TTCCTCTCTCCACCAACATGTTGAGAGAGATGTACACCTTGACACGAGGAAAAATTCCACTGATAGGCTG
CGGTGGTGTTAGCAGTGGTGAGGATGCTTACAAGAAGATAAGAGCTGGAGCTACTCTTGTTCAGCTGTAC
ACTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAATAAAGGAGGAACTGGTGAGTTGCTTAGAAA
GGGACGGCTTCAAGTCGATCGAAGAAGCAATTGGTGCAGATCACCGATGATGATC
Downstream Sequence
GTAAGCACCTTTGGATCAATCTCTTGTTTGAAAAAATCAATCTTTTTAGGCTGTCTACTA
GAATTTGTATCATCAAATGCTTATATAGTTATATATTGTGCAGTAGATTTAGATCATTTT
TGGCTCTTACAAGACCAAATCAGTTTCTCAGTTCTCAAAGTATGAAGCTTTAAATTTTTT
AGGGAAGGATATTGACAGGAGCCACCATTGGTCTTGCCATAGCTGGAGGAGCTTATGTCA
GTACTGCAGATGAAGCAACCTTCTGGTACTAGTGCCTGTGACATTACGTATCTTTGTCTT
TTATTCTCCTTGTTAATTTTGATCCATCTTGTGTGTTGGACAGTGGGTGGCTGTTCTCAG
CAACAAAGGTTGTTAACCCTCTCTTTGCTCTTCTGGATGCTGAGTTTGCGCACAAGCTGG
CCGTCACGGCTGCTGCTCGCGGGTGGGTGCCTAGAGAGAAGAGGCCTGATCCACAGATCT
TGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGTCTTGCTGCTGGATTCG
ACAAAAACGCTGAAGCCACAGAGGGATTGCTAGGACTTGGGTTTGGCTTTGTTGAGGTTG
GCTCTGTAACTCCAGTTCCACAAGAAGGCAACCCTAAGCCACGTATCTTCAGATTACGTG
AAGATGGGTGAGAATCTCAAAATCCATGACCTTTTAATGTTTCAGATAATCTCAACTACT
GAATAATCTTTGCTTCTTGTCCTTCCAGAGCCATTATCAATAGGTGTGGGTTTAACAGTG
AAGGGATTGTTGTGGTTGCAAAGCGGTTGGGTGCTCAACATGGTAAAAGAATGTTGGCGG
AAACATCAGGCACTTCGTCATCTCCAGGTGATGAAGTTAAACCAGGGGGCAAATCCGGAC
CTGGTATACTTGGAGTCAACCTTGGAAAGAACAAGACAAGTGAAGATGCAGCTGCTGATT
ATGTCCAGGGAGTTCATAACTTATCCCAATATGCTGATTACTTGGTAATATATAGAGCAT
TCATTTGATCTTCCCTACCATAGAATTATTTGCTCCTAATTTTTTTCATTTTTATTTTTC
TCTACAGGTTATAAATGTTTCATCACCCAACACAGCAGGGCTGAGGATGCTTCAGGGGAG
GAAACAGTTGAAGGACCTTGTAAAGAAGGTACAAGCTGCTAGGGATGAGATGCAGTGGGG
TGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTATCCAGAGGAGAGCT
TGAAGATATTGCAGCGGTGAGTTGTAATTTAGAAAAAAAACAAAACTCAATACTTTCCAC
CAAGTAAAATGGCTCTTACAACATTGTATTGGTATTGGCTTGTGTAGGTTGCTCTTGCTC
TCCACTTGGATGGGCTGGTAAGTTATCTTGATACACGAACTAACCTATGTTTCATCAGTG
ATAATACTGTTTTTTGTGATTGTCCTATAGATCATATCAAATACAACAGTCTCGAGGCCA
GATCCTGTAAGCAACAACCCAGTGGCAACAGAAACAGGTGGTTTGAGCGGGAAACCGCTC
TTTCCTCTCTCCACCAACATGTTGAGAGAGATGTACACCTTGACACGAGTAAGTTTTTCT
TTTTTAATCTAAAAAGAGATATCAAGGAACTAAAACATTTCTGATTCTGGTTATTGGCTT
TTTGCATGACATCTTACTTAGGGAAAAATTCCACTGATAGGCTGCGGTGGTGTTAGCAGG
TAAACGTCTTTAACATGATTTTATATTGTGAGGAAAACAAACACACAAAATTTTGATTCA
GATGATTTTTCTTCAGTGGTGAGGATGCTTACAAGAAGATAAGAGCTGGAGCTACTCTTG
TTCAGCTGTACACTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAATAAAGGTAT
TTTACTGGTCTTTTCTGGGATCGGGGAAGTTTAATAAGCATAGAGAAGTCTAAAAGCTAC
ATTCACAAAGTGAAAATTCA
Pro Sequence
MAGRAATSSAKWAREFLLRRNPLGAIRNSSSAAPGAASSTPKVPHFSKKG
RILTGATIGLAIAGGAYVSTADEATFCGWLFSATKVVNPLFALLDAEFAH
KLAVTAAARGWVPREKRPDPQILGLEVWGRKFSNPIGLAAGFDKNAEATE
GLLGLGFGFVEVGSVTPVPQEGNPKPRIFRLREDGAIINRCGFNSEGIVV
VAKRLGAQHGKRMLAETSGTSSSPGDEVKPGGKSGPGILGVNLGKNKTSE
DAAADYVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKKVQA
ARDEMQWGDDGPPPLLVKIAPDLSRGELEDIAAVALALHLDGLIISNTTV
SRPDPVSNNPVATETGGLSGKPLFPLSTNMLREMYTLTRGKIPLIGCGGV
SSGEDAYKKIRAGATLVQLYTGFAYGGPALIPQIKEELVSCLERDGFKSI
EEAIGADHR
mRNA Sequence
ATGGCTGGAAGAGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTGCTCAGAAGGAATCCTCTTG
GAGCGATTCGAAACTCTTCTTCTGCTGCTCCTGGCGCGGCTTCCTCTACACCTAAAGTCCCTCACTTTTC
CAAAAAAGGAAGGATATTGACAGGAGCCACCATTGGTCTTGCCATAGCTGGAGGAGCTTATGTCAGTACT
GCAGATGAAGCAACCTTCTGTGGGTGGCTGTTCTCAGCAACAAAGGTTGTTAACCCTCTCTTTGCTCTTC
TGGATGCTGAGTTTGCGCACAAGCTGGCCGTCACGGCTGCTGCTCGCGGGTGGGTGCCTAGAGAGAAGAG
GCCTGATCCACAGATCTTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGTCTTGCTGCT
GGATTCGACAAAAACGCTGAAGCCACAGAGGGATTGCTAGGACTTGGGTTTGGCTTTGTTGAGGTTGGCT
CTGTAACTCCAGTTCCACAAGAAGGCAACCCTAAGCCACGTATCTTCAGATTACGTGAAGATGGAGCCAT
TATCAATAGGTGTGGGTTTAACAGTGAAGGGATTGTTGTGGTTGCAAAGCGGTTGGGTGCTCAACATGGT
AAAAGAATGTTGGCGGAAACATCAGGCACTTCGTCATCTCCAGGTGATGAAGTTAAACCAGGGGGCAAAT
CCGGACCTGGTATACTTGGAGTCAACCTTGGAAAGAACAAGACAAGTGAAGATGCAGCTGCTGATTATGT
CCAGGGAGTTCATAACTTATCCCAATATGCTGATTACTTGGTTATAAATGTTTCATCACCCAACACAGCA
GGGCTGAGGATGCTTCAGGGGAGGAAACAGTTGAAGGACCTTGTAAAGAAGGTACAAGCTGCTAGGGATG
AGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTATCCAGAGGAGA
GCTTGAAGATATTGCAGCGGTTGCTCTTGCTCTCCACTTGGATGGGCTGATCATATCAAATACAACAGTC
TCGAGGCCAGATCCTGTAAGCAACAACCCAGTGGCAACAGAAACAGGTGGTTTGAGCGGGAAACCGCTCT
TTCCTCTCTCCACCAACATGTTGAGAGAGATGTACACCTTGACACGAGGAAAAATTCCACTGATAGGCTG
CGGTGGTGTTAGCAGTGGTGAGGATGCTTACAAGAAGATAAGAGCTGGAGCTACTCTTGTTCAGCTGTAC
ACTGGGTTTGCGTATGGTGGACCTGCTCTCATCCCACAAATAAAGGAGGAACTGGTGAGTTGCTTAGAAA
GGGACGGCTTCAAGTCGATCGAAGAAGCAATTGGTGCAGATCACCGATGATGATC