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DETAIL

Detail for ZS11_C07G58810.t1

Genome:
ZS11: ZS11_C07G58810.t1
ZS11_v0: BnaC07T0481500ZS
WE: WE_C07G59530.t1
WE_v0: BnaC07T0424800WE
Darmor: C07p56040.1_BnaDAR
BH: BnaC07T511000BH
Quinta: BnaC07T0457800QU
ZS2: BnaC07T458600ZS2
SW: BnaC07T507400SW
Express61: C07p033540.1_BnaEXP
Xiaoyun: BnaC07G0502700XY
P202: BnaC07G090070P202.1
BL: BnaC07T511000BH
TA: BnaA03T505600TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g11580D
RB: BnaC07T513400RB
No2127: BnaA03T0492400NO
P130: BnaC07G057700P130.1
Length: 570
KOG ID: KOG2495
KOG E-value: Not available
KOG Score: 959.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006116(NADH oxidation)
Cellular Component: -
Molecular Function: GO:0016491(oxidoreductase activity),GO:0003954(NADH dehydrogenase activity),GO:0005509(calcium ion binding)
KEGG Ortholog: K17871 ndh1; NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]
NR Protein: CDY58724.1
NR E-value: Not available
NR Score: 1081.2
NR Annotation: CDY58724.1 BnaC07g50650D [Brassica napus]
SwissProt Protein: Q1JPL4|NDB1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1021.0
SwissProt Annotation: External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDB1 PE=1 SV=1
CDS Sequence (1737 bp)
ATGACAATACTTTCCTCTCTCGGAAGAGCCTCTCGATCTGCTCCACTTGCCTCTAAGCTCCTCCTACTCG
GCACTCTCAGCGGTGGGAGTTTAGTGGCCTACTCAGATTCTAACAAAAAGGAGGAAGAGCAGAAGCAGAA
GAAGAAGAAAGTAGTGGTACTTGGCACTGGATGGGCTGGTATAAGCTTCCTTAAAGATCTTGACATCTCT
TCCTACGACGTTCAGGTTGTTTCTCCTCAGAACTACTTTGCCTTCACTCCATTGTTACCTAGCGTCACTT
GTGGAACTGTTGAAGCTAGAAGCATCGTTGAGTCTGTCCGCAATATCACCAAGAAGAAAAATGGAGAGAT
TGAGTTATGGGAAGCAGACTGTGTCAAGATCGATCCTGCCAACAACAAGGTTCACTGCCAACCAGTTTTC
AAGGATGACCCTGAAGCAAGCCAAGAGTTTTCGCTAGAGTACGACTACTTGATCATAGCGGTGGGAGCGC
AAGTCAACACGTTTGGCACTCCTGGTGTTCTTGAGAACTGTCATTTCCTCAAGGAAGTAGAGGATGCGCA
GAGGATAAGGAGAGGAGTGATTGATTGCTTTGAAAAGGCGGTTCTTCCTGGTCTCACTGAGGAGCAGAGA
AGGACAAAGCTTCATTTTGTTATAGTGGGAGGTGGTCCTACTGGTGTGGAGTTTGCAGCTGAGTTACATG
ACTTTATCGAAGAGGATATCACCAAAATATACCCTTCGGTCAAGGAGCTTGTGAAGATTACACTTATTCA
ATCTGGAGATCATATCTTGAATTCGTTTGATGAACGTATCAGTTCATTTGCTGAACAGAAGTTCTTGCGA
GATGGGATCGATGTTCTGATGGGAATGCGTGTGATGTCAGTGTCCGATAAAGACATCTCTGTGAAGATCA
AATCAAGTGGAGAAGTCGTAAGCCTTCCTCATGGTTTGATACTGTGGTCCACCGGTGTTGGGACACGTCC
AGTGATCAGTGACCTCATGGAGCAAGTTGGCCAAGGAGGGAGACGAGCCTTGGCGACCAACGAGTGGTTA
CAGGTGAAAGGATGCGAGAATGTGTATGCAGTTGGAGACTGTGCTTCCATAGCTCAACGCAAAATCATGG
GGGATATTGCGAATATATTCAAAGCTTGTGACGTGGACAACTCAGGGACGTTGACGGAAGAAGAGTTACA
AGACGTGGTTGAGGATATCAATGTGAGGTACCCACAGGTTGAGCTCTACTTGAAAAGCAAGCATGTGAGG
AGTATCAAAGACCTTCTGACTGATTCAGAAGGTAATCCAAAGAAAGAAGTGGACATCAAGGCGTTTGAGT
CGGCTCTCTCTGGGGTTGACTCTCAGATGAAGAGCCTGCCTGCAACTGCTCAGGTTGCTGCTCAGCAAGG
TTCTTATCTTGCAAAATGTTTTAACAAGATGGAGCATTGTAAAGAGCATCCTGAAGGTCCTAAGCGCTTC
AGAACTGGAGGGCATCACCAGTTTCGTCCCTTCCAGTACAAGCACTTTGGACAGTTTGCTCCACTGGGAG
GGGACCAAGCAGCTGCTGAACTACCAGGAGACTGGGTTTCAGCTGGAAGAAGCACCCAGTGGCTCTGGTA
TTCTGTTTATGCCAGCAAGCAAGTTAGCTGGCGAACGAGGGCTCTGGTGGTGTCGGACTGGACAAGGAGG
TACATCTTTGGGAGGGATTCAAGCCGTATCTGA
Upstream Sequence
ATGACAATACTTTCCTCTCTCGGAAGAGCCTCTCGATCTGCTCCACTTGCCTCTAAGCTCCTCCTACTCG
GCACTCTCAGCGGTGGGAGTTTAGTGGCCTACTCAGATTCTAACAAAAAGGAGGAAGAGCAGAAGCAGAA
GAAGAAGAAAGTAGTGGTACTTGGCACTGGATGGGCTGGTATAAGCTTCCTTAAAGATCTTGACATCTCT
TCCTACGACGTTCAGGTTGTTTCTCCTCAGAACTACTTTGCCTTCACTCCATTGTTACCTAGCGTCACTT
GTGGAACTGTTGAAGCTAGAAGCATCGTTGAGTCTGTCCGCAATATCACCAAGAAGAAAAATGGAGAGAT
TGAGTTATGGGAAGCAGACTGTGTCAAGATCGATCCTGCCAACAACAAGGTTCACTGCCAACCAGTTTTC
AAGGATGACCCTGAAGCAAGCCAAGAGTTTTCGCTAGAGTACGACTACTTGATCATAGCGGTGGGAGCGC
AAGTCAACACGTTTGGCACTCCTGGTGTTCTTGAGAACTGTCATTTCCTCAAGGAAGTAGAGGATGCGCA
GAGGATAAGGAGAGGAGTGATTGATTGCTTTGAAAAGGCGGTTCTTCCTGGTCTCACTGAGGAGCAGAGA
AGGACAAAGCTTCATTTTGTTATAGTGGGAGGTGGTCCTACTGGTGTGGAGTTTGCAGCTGAGTTACATG
ACTTTATCGAAGAGGATATCACCAAAATATACCCTTCGGTCAAGGAGCTTGTGAAGATTACACTTATTCA
ATCTGGAGATCATATCTTGAATTCGTTTGATGAACGTATCAGTTCATTTGCTGAACAGAAGTTCTTGCGA
GATGGGATCGATGTTCTGATGGGAATGCGTGTGATGTCAGTGTCCGATAAAGACATCTCTGTGAAGATCA
AATCAAGTGGAGAAGTCGTAAGCCTTCCTCATGGTTTGATACTGTGGTCCACCGGTGTTGGGACACGTCC
AGTGATCAGTGACCTCATGGAGCAAGTTGGCCAAGGAGGGAGACGAGCCTTGGCGACCAACGAGTGGTTA
CAGGTGAAAGGATGCGAGAATGTGTATGCAGTTGGAGACTGTGCTTCCATAGCTCAACGCAAAATCATGG
GGGATATTGCGAATATATTCAAAGCTTGTGACGTGGACAACTCAGGGACGTTGACGGAAGAAGAGTTACA
AGACGTGGTTGAGGATATCAATGTGAGGTACCCACAGGTTGAGCTCTACTTGAAAAGCAAGCATGTGAGG
AGTATCAAAGACCTTCTGACTGATTCAGAAGGTAATCCAAAGAAAGAAGTGGACATCAAGGCGTTTGAGT
CGGCTCTCTCTGGGGTTGACTCTCAGATGAAGAGCCTGCCTGCAACTGCTCAGGTTGCTGCTCAGCAAGG
TTCTTATCTTGCAAAATGTTTTAACAAGATGGAGCATTGTAAAGAGCATCCTGAAGGTCCTAAGCGCTTC
AGAACTGGAGGGCATCACCAGTTTCGTCCCTTCCAGTACAAGCACTTTGGACAGTTTGCTCCACTGGGAG
GGGACCAAGCAGCTGCTGAACTACCAGGAGACTGGGTTTCAGCTGGAAGAAGCACCCAGTGGCTCTGGTA
TTCTGTTTATGCCAGCAAGCAAGTTAGCTGGCGAACGAGGGCTCTGGTGGTGTCGGACTGGACAAGGAGG
TACATCTTTGGGAGGGATTCAAGCCGTATCTGA
Downstream Sequence
GTTTCACTTTTTTCACTTGTTTCCCAAAAGTCGGAAGGAACCTTTTTATGCTGTATAGTT
GCGTTTTCTCAAATCTTGTAACGCCCTTTATCTCCAATCTTTTCTTTATAATAACCTTTA
GTGTTTGACTTAGGACAACGTTCTTGTTCTGTTAAACTTAAATCTAATACCTTTTTATTG
ACTTGGTGTCAACGAGACCTGTGTTTCACAATTTTTGGATTTGCTCACATTGAGAATGTG
TTGTATTCTCTACACATTTGCAGCGGTGGGAGTTTAGTGGCCTACTCAGATTCTAACAAA
AAGGAGGAAGAGCAGAAGCAGAAGAAGAAGAAAGTAGTGGTACTTGGCACTGGATGGGCT
GGTATAAGCTTCCTTAAAGATCTTGACATCTCTTCCTACGACGTTCAGGTTGTTTCTCCT
CAGAACTACTTTGCCTTCACTCCATTGTTACCTAGCGTCACTTGTGGAACTGTTGAAGCT
AGAAGCATCGTTGAGTCTGTCCGCAATATCACCAAGAAGGTATCTTTGTATCTTTGGTCA
ATCATCATCATCTGTTAAGCTTACATACACTTTTGTTATTGGCAGAAAAATGGAGAGATT
GAGTTATGGGAAGCAGACTGTGTCAAGATCGATCCTGCCAACAACAAGGTTCACTGCCAA
CCAGTTTTCAAGGATGACCCTGAAGCAAGCCAAGAGTTTTCGCTAGAGTACGACTACTTG
ATCATAGCGGTGGGAGCGCAAGTCAACACGTTTGGCACTCCTGGTGTTCTTGAGAACTGT
CATTTCCTCAAGGAAGTAGAGGATGCGCAGAGGATAAGGAGAGGAGTGATTGATTGCTTT
GAAAAGGCGGTTCTTCCTGGTCTCACTGAGGAGCAGAGAAGGACAAAGCTTCATTTTGTT
ATAGTGGGAGGTGGTCCTACTGGTGTGGAGTTTGCAGCTGAGTTACATGACTTTATCGAA
GAGGATATCACCAAAATATACCCTTCGGTCAAGGAGCTTGTGAAGATTACACTTATTCAA
TCTGGAGATCATATCTTGAATTCGTAAGTCAAAAGACTATGGTAGCTTGTAGCCATCGGC
ATTCGGTTTTAGGTTCGGTTCTTTGGTTCTAGTAGTTTAGGATCCCAGTATTTAGAAAAT
TCAGTTCGGTTTTGGTTCAGTTATTTGGGTTTTTGGTTCGGTTAGGAAAGCAAAATTGGA
AACCGGCTAATATCCTTAGGTAAATTTGGATCCCATTTGGTTCCGGTACGGTTATGGCTT
TTCGGTTAATTCAGATTAAAAAGTCAGAAATTCAGTGTTTTCTGATTAAATATCAGATTT
TTTCGGTTCCTCTGTTCCGGATAAATGTCTAGTAGCTTGTCTTGGTTGTTGGGAGTTTGA
CAAAGTGATTGCTGTTGTTGCAGGTTTGATGAACGTATCAGTTCATTTGCTGAACAGAAG
TTCTTGCGAGATGGGATCGATGTTCTGATGGGAATGCGTGTGATGTCAGTGTCCGATAAA
GACATCTCTGTGAAGATCAAATCAAGTGGAGAAGTCGTAAGCCTTCCTCATGGTTTGATA
CTGTGGTCCACCGGTGTTGGGACACGTCCAGTGATCAGTGACCTCATGGAGCAAGTTGGC
CAAGGAGGGAGACGAGCCTTGGCGACCAACGAGTGGTTACAGGTGAAAGGATGCGAGAAT
GTGTATGCAGTTGGAGACTGTGCTTCCATAGCTCAACGCAAAATCATGGGGGATATTGCG
AATATATTCAAAGCTTGTGACGTGGACAACTCAGGGACGTTGACGGAAGAAGAGTTACAA
GACGTGGTTGAGGATATCAATGTGAGGTACCCACAGGTTGAGCTCTACTTGAAAAGCAAG
CATGTGAGGAGTATCAAAGACCTTCTGACTGATTCAGAAGGTAATCCAAAGAAAGAAGTG
GACATCAAGGCGTTTGAGTCGGCTCTCTCTGGGGTTGACTCTCAGATGAAGAGCCTGCCT
GCAACTGCTCAGGTACACTT
Pro Sequence
MTILSSLGRASRSAPLASKLLLLGTLSGGSLVAYSDSNKKEEEQKQKKKK
VVVLGTGWAGISFLKDLDISSYDVQVVSPQNYFAFTPLLPSVTCGTVEAR
SIVESVRNITKKKNGEIELWEADCVKIDPANNKVHCQPVFKDDPEASQEF
SLEYDYLIIAVGAQVNTFGTPGVLENCHFLKEVEDAQRIRRGVIDCFEKA
VLPGLTEEQRRTKLHFVIVGGGPTGVEFAAELHDFIEEDITKIYPSVKEL
VKITLIQSGDHILNSFDERISSFAEQKFLRDGIDVLMGMRVMSVSDKDIS
VKIKSSGEVVSLPHGLILWSTGVGTRPVISDLMEQVGQGGRRALATNEWL
QVKGCENVYAVGDCASIAQRKIMGDIANIFKACDVDNSGTLTEEELQDVV
EDINVRYPQVELYLKSKHVRSIKDLLTDSEGNPKKEVDIKAFESALSGVD
SQMKSLPATAQVAAQQGSYLAKCFNKMEHCKEHPEGPKRFRTGGHHQFRP
FQYKHFGQFAPLGGDQAAAELPGDWVSAGRSTQWLWYSVYASKQVSWRTR
ALVVSDWTRRYIFGRDSSRI
mRNA Sequence
ATGACAATACTTTCCTCTCTCGGAAGAGCCTCTCGATCTGCTCCACTTGCCTCTAAGCTCCTCCTACTCG
GCACTCTCAGCGGTGGGAGTTTAGTGGCCTACTCAGATTCTAACAAAAAGGAGGAAGAGCAGAAGCAGAA
GAAGAAGAAAGTAGTGGTACTTGGCACTGGATGGGCTGGTATAAGCTTCCTTAAAGATCTTGACATCTCT
TCCTACGACGTTCAGGTTGTTTCTCCTCAGAACTACTTTGCCTTCACTCCATTGTTACCTAGCGTCACTT
GTGGAACTGTTGAAGCTAGAAGCATCGTTGAGTCTGTCCGCAATATCACCAAGAAGAAAAATGGAGAGAT
TGAGTTATGGGAAGCAGACTGTGTCAAGATCGATCCTGCCAACAACAAGGTTCACTGCCAACCAGTTTTC
AAGGATGACCCTGAAGCAAGCCAAGAGTTTTCGCTAGAGTACGACTACTTGATCATAGCGGTGGGAGCGC
AAGTCAACACGTTTGGCACTCCTGGTGTTCTTGAGAACTGTCATTTCCTCAAGGAAGTAGAGGATGCGCA
GAGGATAAGGAGAGGAGTGATTGATTGCTTTGAAAAGGCGGTTCTTCCTGGTCTCACTGAGGAGCAGAGA
AGGACAAAGCTTCATTTTGTTATAGTGGGAGGTGGTCCTACTGGTGTGGAGTTTGCAGCTGAGTTACATG
ACTTTATCGAAGAGGATATCACCAAAATATACCCTTCGGTCAAGGAGCTTGTGAAGATTACACTTATTCA
ATCTGGAGATCATATCTTGAATTCGTTTGATGAACGTATCAGTTCATTTGCTGAACAGAAGTTCTTGCGA
GATGGGATCGATGTTCTGATGGGAATGCGTGTGATGTCAGTGTCCGATAAAGACATCTCTGTGAAGATCA
AATCAAGTGGAGAAGTCGTAAGCCTTCCTCATGGTTTGATACTGTGGTCCACCGGTGTTGGGACACGTCC
AGTGATCAGTGACCTCATGGAGCAAGTTGGCCAAGGAGGGAGACGAGCCTTGGCGACCAACGAGTGGTTA
CAGGTGAAAGGATGCGAGAATGTGTATGCAGTTGGAGACTGTGCTTCCATAGCTCAACGCAAAATCATGG
GGGATATTGCGAATATATTCAAAGCTTGTGACGTGGACAACTCAGGGACGTTGACGGAAGAAGAGTTACA
AGACGTGGTTGAGGATATCAATGTGAGGTACCCACAGGTTGAGCTCTACTTGAAAAGCAAGCATGTGAGG
AGTATCAAAGACCTTCTGACTGATTCAGAAGGTAATCCAAAGAAAGAAGTGGACATCAAGGCGTTTGAGT
CGGCTCTCTCTGGGGTTGACTCTCAGATGAAGAGCCTGCCTGCAACTGCTCAGGTTGCTGCTCAGCAAGG
TTCTTATCTTGCAAAATGTTTTAACAAGATGGAGCATTGTAAAGAGCATCCTGAAGGTCCTAAGCGCTTC
AGAACTGGAGGGCATCACCAGTTTCGTCCCTTCCAGTACAAGCACTTTGGACAGTTTGCTCCACTGGGAG
GGGACCAAGCAGCTGCTGAACTACCAGGAGACTGGGTTTCAGCTGGAAGAAGCACCCAGTGGCTCTGGTA
TTCTGTTTATGCCAGCAAGCAAGTTAGCTGGCGAACGAGGGCTCTGGTGGTGTCGGACTGGACAAGGAGG
TACATCTTTGGGAGGGATTCAAGCCGTATCTGA