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Detail for ZS11_C08G01890.t1

Genome:
ZS11: ZS11_C08G01890.t1
ZS11_v0: BnaC08T0011500ZS
WE: WE_C08G03300.t1
WE_v0: Bnascaffold2904T0011300WE
Darmor: C08p01220.1_BnaDAR
BH: BnaC08T013200BH
Quinta: BnaA10T0027400QU
ZS2: BnaC08T011200ZS2
SW: BnaC08T012500SW
Express61: C08p001020.1_BnaEXP
Xiaoyun: BnaC08G0013600XY
P202: BnaC08G002220P202.1
BL: BnaC08T013200BH
TA: BnaC05T026800TA
Da-Ae: Not available
RB: BnaA10T031100RB
No2127: BnaC05T0026200NO
P130: BnaC08G001530P130.1
Length: 143
KOG ID: KOG3300
KOG E-value: 5.020000e-101
KOG Score: 286.0
KOG Annotation: Energy production and conversion; Cell cycle control, cell division, chromosome partitioning
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K11353 NDUFA13; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
NR Protein: XP_013720523.1
NR E-value: 4.600000e-79
NR Score: 298.9
NR Annotation: XP_013720523.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Brassica napus]
SwissProt Protein: O49313|NDADB_ARATH
SwissProt E-value: 2.130000e-100
SwissProt Score: 286.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana OX=3702 GN=At2g33220 PE=2 SV=1
CDS Sequence (438 bp)
ATGACGGAGGCGATGATAAGGAAGAAGCCAGGGATGGCGAGCGTGAAGGATATGCCGCTGCTTCAAGATG
GTCCGCCACCGGGTGGATTCGCGCCGGTCCGGTATGCTCGGCGGATATCCAATACGGGTCCTAGCGCCAT
GGCTATTTTCCTTACAGTTTCTGGTGCATTTGCTTGGGGGATGTACCAGGTCGGCCAGGGAAACAAAATT
CGCAGGGCGTTGAAGGAAGAGAAATATGCTGCTCGTAGAGCTATACTTCCCATTCTTCAAGCTGAAGAAG
ATGAAAGGTTTGTGTCCGAGTGGAAAAAGTATCTGGACTACGAGGCATATGTAATGAAGGATGTTCCGGG
ATGGAAAGTTGGCGAGAACGTTTACAATTCTGGTCGTTGGATGCCACCCGCCACTGGGGAACTCCGTCCT
GATGTCTGGTGA
Upstream Sequence
GTTGAATCGGATCTCAGCCATGGGTCAGCCCGTTTAAGACCGCGGGCTTCAAGCCCATTTTAACATATCT
ACTTCTGAATCCCTAGAACACTCGGTTAGCAAAATCGAATCGGATCTCAGTGATCAGAGAGAGAGAGAGT
CACTTCGATCGAGCAAAGATGACGGAGGCGATGATAAGGAAGAAGCCAGGGATGGCGAGCGTGAAGGATA
TGCCGCTGCTTCAAGATGGTCCGCCACCGGGTGGATTCGCGCCGGTCCGGTATGCTCGGCGGATATCCAA
TACGGGTCCTAGCGCCATGGCTATTTTCCTTACAGTTTCTGGTGCATTTGCTTGGGGGATGTACCAGGTC
GGCCAGGGAAACAAAATTCGCAGGGCGTTGAAGGAAGAGAAATATGCTGCTCGTAGAGCTATACTTCCCA
TTCTTCAAGCTGAAGAAGATGAAAGGTTTGTGTCCGAGTGGAAAAAGTATCTGGACTACGAGGCATATGT
AATGAAGGATGTTCCGGGATGGAAAGTTGGCGAGAACGTTTACAATTCTGGTCGTTGGATGCCACCCGCC
ACTGGGGAACTCCGTCCTGATGTCTGGTGATCTCTTCTCAGTTTCTCACAAATGCATACCTCAATGAGGG
TTAATAATATGTTTTTGTTTTATCTTTAACATTGGGTAATAAGAGGAAGAATGATTCAACAGACAGTTGC
TCTTGTACTGGTTTTACTGGAACGTTAATCTGTGTGTGTGTGTGTGTGTGTGATTGTTTCAATGGTAAAA
TGTGACGCAGTTTTTTTTTTAAT
Downstream Sequence
GGTAACAAAGGAGATTTGTGTAGCTGCTAGCGAACATTTCGTTTTGTTAGATCTCCCCTT
GGGAGGATAAGCTTTGCTAAGTGATTGAATGTTCTATTTCATATCTTGTCTCGGTTAGTG
TTCCATTGTCTTCATATAAGCATATAACGTTTGTAGAGTTTGTTAGTCCCTTTTGCTATA
TATGCTTCTGTCATTTGGCTTTTATCACAACAAGAAAAAACACGTTTATTTCGTTCTCAA
TTTGTTGAAAGTTTTAAACTTCTTTGTGAGTTTAAATTCAGAACTAGATTTCATATTGTT
GTTTCCCATGGATCAGAAACACTCAATTTCCTCGTGATGCTAATAAGTATTGAGTATATT
CGTTATCAATAAGTTGTAAGGGTTGAGGTTCTTAGTAAGTTTGATTTTGATGTGTAGGGC
GTTGAAGGAAGAGAAATATGCTGCTCGTAGAGCTATACTTCCCATTCTTCAAGCTGAAGA
AGATGAAAGGTTACCATTTTCTTTAGTTACAACTCATTGTTTCTGCAACCTTCAGACAGT
TAAGTGACGATATTTGTGTTAAATAGGTTTGTGTCCGAGTGGAAAAAGTATCTGGACTAC
GAGGCATATGTAATGAAGGATGTTCCGGGATGGAAAGTTGGCGAGAACGTTTACAATTCT
GGTCGTTGGATGCCACCCGCCACTGGGGAACTCCGTCCTGATGTCTGGTGATCTCTTCTC
AGTTTCTCACAAATGCATACCTCAATGAGGGTTAATAATATGTTTTTGTTTTATCTTTAA
CATTGGGTAATAAGAGGAAGAATGATTCAACAGACAGTTGCTCTTGTACTGGTTTTACTG
GAACGTTAATCTGTGTGTGTGTGTGTGTGTGTGATTGTTTCAATGGTAAAATGTGACGCA
GTTTTTTTTTTAATCAACAATCATTCAAGTTTGATTTAgTTTCTTTGGTTtATTAAATTG
GGTTCTCAGTTTGGTTATTATTTACCTGTTCTTTTTGAATATTTTAAAAGGCTATAGTGA
AGTACAACCAAATCAGCGATCAATCACTAATCACTAAGGAATATTGGAACTAAACTTTTT
CTAATAAGAATTTATGTTTCTAGTTTGGTTAACCTTCTTCAAGAGGAATCTCAGGTTCAA
AGGCAAAAATATCTACTCTCACTGGGTAAACATAATTACTCTTACAATCTGGGCCAAGTG
GTTTAAGCCCAAAATTTTCCAAGGCCCAGTTGGCTGTCTTCAGTGTCAATAAATTTATTT
ATTAAACAAAATTTGTTTTAGTTCAAAATTCCCGCCTGAGTTTCTTGACGTACAAGCAAT
CAAGCTGAAAAGCGGAAGCTGATCAGCTACAGACGCTCAAATTAAAACGCCCTTTGGGGA
AATTAAAAACAGTAACCTATTACATATACAGCTTATACCAATGTGAATCAATGGTAGCTT
AGCCCCATTAGTTAGAGGCATTAGGAAGAAAACTGAAACAGTTTCTCAGTCCTTGAGAAA
GAGGAAGCTAGGATTATCAGCGAGCTCGGAAACTGATTTTACATTCGCAAAGTCCTTTTC
TTGCATGCAGTTCGCGACCTCATCGGTTTCAAAAGGGATGCTGTTGTGTTCACACAAAAG
GAAAAAAAATATTCATGATGCATGACAATGTTTAGAGAGGCTTGTGAGTATATTTAGCTA
GTACCTGGAATCAtcgtctaataaaaggaacggctgtcttcatcttcatttgtcattaga
agttttaagttagaaatcacctgcatcgaatgCAGCATTAAGACCAAATAAGTCAATAGA
AGAATCTCTTGTCATGTTTGGTTTATCAGATCTCTGGGAAGATATTCATTGCAACGTACC
TCTGGCGATACGTTATGATCGTTGTGGTCTTCGTTATTGGAAAGGATGCATATCCTATAC
AGTTGCTGAGTACCAAGAACCTGATACACAGAGAAAGATCAGAAAAAGGGTAAGTTATTT
GATTCTGTAACCAGAGAAGC
Pro Sequence
MTEAMIRKKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAIF
LTVSGAFAWGMYQVGQGNKIRRALKEEKYAARRAILPILQAEEDERFVSE
WKKYLDYEAYVMKDVPGWKVGENVYNSGRWMPPATGELRPDVW
mRNA Sequence
GTTGAATCGGATCTCAGCCATGGGTCAGCCCGTTTAAGACCGCGGGCTTCAAGCCCATTTTAACATATCT
ACTTCTGAATCCCTAGAACACTCGGTTAGCAAAATCGAATCGGATCTCAGTGATCAGAGAGAGAGAGAGT
CACTTCGATCGAGCAAAGATGACGGAGGCGATGATAAGGAAGAAGCCAGGGATGGCGAGCGTGAAGGATA
TGCCGCTGCTTCAAGATGGTCCGCCACCGGGTGGATTCGCGCCGGTCCGGTATGCTCGGCGGATATCCAA
TACGGGTCCTAGCGCCATGGCTATTTTCCTTACAGTTTCTGGTGCATTTGCTTGGGGGATGTACCAGGTC
GGCCAGGGAAACAAAATTCGCAGGGCGTTGAAGGAAGAGAAATATGCTGCTCGTAGAGCTATACTTCCCA
TTCTTCAAGCTGAAGAAGATGAAAGGTTTGTGTCCGAGTGGAAAAAGTATCTGGACTACGAGGCATATGT
AATGAAGGATGTTCCGGGATGGAAAGTTGGCGAGAACGTTTACAATTCTGGTCGTTGGATGCCACCCGCC
ACTGGGGAACTCCGTCCTGATGTCTGGTGATCTCTTCTCAGTTTCTCACAAATGCATACCTCAATGAGGG
TTAATAATATGTTTTTGTTTTATCTTTAACATTGGGTAATAAGAGGAAGAATGATTCAACAGACAGTTGC
TCTTGTACTGGTTTTACTGGAACGTTAATCTGTGTGTGTGTGTGTGTGTGTGATTGTTTCAATGGTAAAA
TGTGACGCAGTTTTTTTTTTAAT