SEARCH

DETAIL

Detail for ZS11_C08G03560.t1

Genome:
ZS11: ZS11_C08G03560.t1
ZS11_v0: BnaC08T0028100ZS
WE: WE_C08G05300.t1
WE_v0: BnaC08T0001300WE
Darmor: C08p02950.1_BnaDAR
BH: BnaA08T351600BH
Quinta: BnaC08T0000700QU
ZS2: BnaA08T307300ZS2
SW: BnaC08T028000SW
Express61: C08p002320.1_BnaEXP
Xiaoyun: BnaC08G0027600XY
P202: BnaC08G004730P202.2
BL: BnaA08T351600BH
TA: BnaA08T310900TA
Da-Ae: Not available
RB: BnaA08T343900RB
No2127: BnaC08T0001800NO.2
P130: BnaC08G003190P130.2
Length: 506
KOG ID: KOG2495
KOG E-value: Not available
KOG Score: 909.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006116(NADH oxidation)
Cellular Component: -
Molecular Function: GO:0016491(oxidoreductase activity),GO:0003954(NADH dehydrogenase activity)
KEGG Ortholog: K17871 ndh1; NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]
NR Protein: XP_022564225.1
NR E-value: 8.000000e-296
NR Score: 1020.8
NR Annotation: XP_022564225.1 internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial-like [Brassica napus]
SwissProt Protein: Q8GWA1|NDA1_ARATH
SwissProt E-value: Not available
SwissProt Score: 909.0
SwissProt Annotation: Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NDA1 PE=2 SV=1
CDS Sequence (1542 bp)
ATGTCTTGGATCAAGAACCTCGTAAAGATCTCTCCGACAACTTCTTCTGTCGGAAACTTGTTCAGAAACC
ACGAATCCTACACTCTCTTGTCTCGTTTCTGCACGGCTCTGCAACATCAGCAGCAGCAACAGAGCCAGAC
TGTTCAAGAAACGGAGGTCGTACAACATCGTTACGAAGGTTTGGCTCCGACAAAAGAAGGAGAGAAGCCG
AGGTTGTTGGTTCTAGGGTCGGGCTGGGCAGGTTGTCGTCTTATGAAAGGGATCGATACGAGCATTTACG
ACGTCGTTTGCGTCTCTCCGAGAAACCATATGGTCTTTACTCCTCTCTTGGCTTCTACTTGCGTCGGTAC
GCTTGAGTTTAGGTCCGTTGCTGAACCAATCTCTCGTATCCAACCGGCTATTTCACGTGAACCCGGTTCT
TATTACTTCCTCGCTAATTGCTCACGACTTGATTCCCAAAACCATGAGGTGCATTGTGAGACAGTAACAG
ATGGATTAAGCACGTTGAAGCCATGGAAGTTCAAGATCGCTTATGATAAACTAGTACTAGCTTGTGGTGC
AGAAGCATCCACATTTGGGATTAGTGGCGTCTTGGAAAACGCTATCTTCCTCCGTGAGGTTCATCACGCT
CAGGAGATACGTAGAAAGCTTCTTCTTAACCTCATGCTCTCCGAAGTTCCAGGCCTTGGTGGAGAGGAGA
AGAAGAGGTTGTTGCATTGCGTTGTGGTCGGAGGTGGTCCCACTGGTGTAGAGTTTAGTGGTGAGCTGAG
TGATTTCATCATGAAAGATGTTCGTCAGAGATATGCCCATGTCAAAGACGACATCCGTGTTACTTTGATC
GAGGCAAGGGATATACTTTCTTCTTTTGACGATGGGCTCAGACAATATGCAATCAAGCAGCTAAACAAGT
CTGGAGTGAAGCTTGTGCGTGGGATTGTGAAAGAAGTGAAGCCTCAAAGACTAATACTTGACGATGGAAC
CGAAGTTCCTTATGGTCTCTTAGTTTGGTCAACTGGTGTTGGTCCATCTTCATTTGTAAGGTCTCTTGAT
CTTCCAAAAGATCCAGGTGGAAGGATTGGGATTGATGAGTGGATGCGTGTACCTTCAATACAAGACGTGT
TTGCTATTGGTGACTGTAGTGGGTATCTTGAGAGCACAGGGAAGTCAACACTTCCTGCTCTTGCACAGGT
GGCTGAGAGAGAAGGCAAGTACTTGGCGAATCTACTGAACGTGATGGGGAAAGCTGGAGGAGGAAGAGCC
TTCAGCGCAAAGGACACTGAACTTGGGGAGCCGTTTGTGTACAAGCATTTGGGAAGCATGGCTACTATTG
GGAGATACAAAGCTCTCGTTGATCTCCGTGAGAGCAAGCAAGGAAAAGGGATATCAATGGGTGGTTTTCT
GAGCTTTTTCATATGGAGGTCAGCGTATCTGACTCGAGTCGTCAGCTGGAGAAACCGTTTCTACGTCTTT
ATTAACTGGATCACCACTTTCGTTTTCGGCCGTGACACTAGCCGTCTCTGA
Upstream Sequence
TTTGAAACTCCATCCATATCTAGAGCAACATGGCACCGTGTGCGGTCGTAACATTTTCGTTTATATACAT
ATCGTAGCAGCAATCATATATTACCAAATACGAATATTTTCCATTTATTTTGGAGAGAAAGAAGATAGTG
TGACCTGTCTTTTCTAAATCTAGCACGTAGGTTTTTATCAGACGCATAGAAGTGATGATACAGTACCAAG
GCGGCTAGTTGAACAAGAGTGTTCGTTTCTCTAACAGCTTAAGGTCAATAACATTGTGTTTATTGCTTGC
TTAGAAGTAACCTTTTTGTATCATTGTTGAATTTTTCGGGAATTCAAGAACCAAAAGAATCATGTCTTGG
ATCAAGAACCTCGTAAAGATCTCTCCGACAACTTCTTCTGTCGGAAACTTGTTCAGAAACCACGAATCCT
ACACTCTCTTGTCTCGTTTCTGCACGGCTCTGCAACATCAGCAGCAGCAACAGAGCCAGACTGTTCAAGA
AACGGAGGTCGTACAACATCGTTACGAAGGTTTGGCTCCGACAAAAGAAGGAGAGAAGCCGAGGTTGTTG
GTTCTAGGGTCGGGCTGGGCAGGTTGTCGTCTTATGAAAGGGATCGATACGAGCATTTACGACGTCGTTT
GCGTCTCTCCGAGAAACCATATGGTCTTTACTCCTCTCTTGGCTTCTACTTGCGTCGGTACGCTTGAGTT
TAGGTCCGTTGCTGAACCAATCTCTCGTATCCAACCGGCTATTTCACGTGAACCCGGTTCTTATTACTTC
CTCGCTAATTGCTCACGACTTGATTCCCAAAACCATGAGGTGCATTGTGAGACAGTAACAGATGGATTAA
GCACGTTGAAGCCATGGAAGTTCAAGATCGCTTATGATAAACTAGTACTAGCTTGTGGTGCAGAAGCATC
CACATTTGGGATTAGTGGCGTCTTGGAAAACGCTATCTTCCTCCGTGAGGTTCATCACGCTCAGGAGATA
CGTAGAAAGCTTCTTCTTAACCTCATGCTCTCCGAAGTTCCAGGCCTTGGTGGAGAGGAGAAGAAGAGGT
TGTTGCATTGCGTTGTGGTCGGAGGTGGTCCCACTGGTGTAGAGTTTAGTGGTGAGCTGAGTGATTTCAT
CATGAAAGATGTTCGTCAGAGATATGCCCATGTCAAAGACGACATCCGTGTTACTTTGATCGAGGCAAGG
GATATACTTTCTTCTTTTGACGATGGGCTCAGACAATATGCAATCAAGCAGCTAAACAAGTCTGGAGTGA
AGCTTGTGCGTGGGATTGTGAAAGAAGTGAAGCCTCAAAGACTAATACTTGACGATGGAACCGAAGTTCC
TTATGGTCTCTTAGTTTGGTCAACTGGTGTTGGTCCATCTTCATTTGTAAGGTCTCTTGATCTTCCAAAA
GATCCAGGTGGAAGGATTGGGATTGATGAGTGGATGCGTGTACCTTCAATACAAGACGTGTTTGCTATTG
GTGACTGTAGTGGGTATCTTGAGAGCACAGGGAAGTCAACACTTCCTGCTCTTGCACAGGTGGCTGAGAG
AGAAGGCAAGTACTTGGCGAATCTACTGAACGTGATGGGGAAAGCTGGAGGAGGAAGAGCCTTCAGCGCA
AAGGACACTGAACTTGGGGAGCCGTTTGTGTACAAGCATTTGGGAAGCATGGCTACTATTGGGAGATACA
AAGCTCTCGTTGATCTCCGTGAGAGCAAGCAAGGAAAAGGGATATCAATGGGTGGTTTTCTGAGCTTTTT
CATATGGAGGTCAGCGTATCTGACTCGAGTCGTCAGCTGGAGAAACCGTTTCTACGTCTTTATTAACTGG
ATCACCACTTTCGTTTTCGGCCGTGACACTAGCCGTCTCTGATCCAACTCTTCCTCTATCTCTCTCACTC
TCTTGTTTAGGTTATAATCCATTCTTATGACGCATGTGAGAAGATATAAATTAACAGATGGATAAACAAT
AAAGAAATACACAGAGATTTAATGTGGTTCACCTCTAACGGCTACGGGCAAAGAGAGATTTTATTGATGG
AGGAATTACAGAAATCTGTCTACAAGAAGATCAGATCTAGTTTATCTACGGCTGCTAACTAGGTTTAGAG
GAGGCACAAAATATATATAGTTGTGTCCCGGAAAACCCTAGCACTAGTGGGCCTCAAAAGACTAAGACCC
AACAGATTCAAGGCATTATTCAACAAATCTCCACCTTGACTTGAATCATGCATAATCAGATGTACCAGAA
TGCACTTCTTCGTGCTTAGAATACAGATGTACCAGACTCTCTCTTTGCTCAGATGTTCCGTCGAACTCAG
ATGTCAGATGTCCCGTCGGACCAGATGCTCCTCAGAGCCAGATGCCCTCACTTGGGGCAGATGCTCTCTT
CGAGCCAGATGCCCTCTTCGAGCCAGATGCCCCTCAGGGCCAAACGCCCATCAGGACCAGATTTAACAGC
TTGAGATGTTTAGCAAATCAAGACAATGCTTGAACTTTCTATGAGGAACCGGCTTAGTGAACATATCCGC
AGGATTATCAGCTGTTCCTACTGATGTGCCGTGGGGTAGCGCACCGGGCAAAACAGACATGCATGGCTTG
TTCATGGAAAGCAGTAAAGATATATGTTCATTGTTTAACTCATATCTTCCAAACCACGAGGCTTCTACGC
ATTAAATCACTTGGAGAATGTTCTCAACTCAATTACGGAGCTCCTTGAAGAAGAATCAGATCAAACGGAG
TTCATATGTGATAGTTATGCTATTTACAAATCAGGTGATCTTCAGTTCTCGCGAATTCAGACCACCCGAG
AAGCTCGAAATGGCTAACCTTCTTTCTGATGAACCAACGGTCAATTCAATCATTACAAAGGTTATTATTC
ATGTTCTAAATGTTCAAGAAAGCATTGGGCTTGATGGTTTTCAAAAAGATTCAAAAACAAGCTTGTTTGG
ACCAAATGGAGAAACCGATAAAATATTGGCTAAGGGAAAAGATGGATTTCGACCAGGCCTCAAAGGGATA
TGTCTTGGACCATATCAGGAGCATATTCTTCACTTTTCAAAGTCTTGGTCGTGGCTATATGAAGAGG
Downstream Sequence
GTAATTGTGTTTGTATGTTGTTTTGACTTTGTGTTGTGTCATATACGATATTTAAAATAT
TGGTAGGCGGTATTTTGTAGAAGAGTAGCGATTACGGATTATTTTAGAGCTTAGACGAAG
TCTAgatattaataaattattaatttcatatatataTTATACATTTATACAAGATATTTT
AGTTTTTGATTTTTGATACTAAAATTATTTTGATGAATTATTAAAATTAGATATAAAAAA
CAAAAGAAATTCGACAAATTTGTGGATTTGTACTATCATTATTGAATTAATTTAACAAAC
CGTAGAAAAATTTTAACCGATTTAAACGATTTAAATCATATAAACCGGATAAAAATTGTT
TCGGCTAGTACCGATTTGCCTTCTAGGCCTAGGCGGGGGCTTATGCGCCGCTTAGACTGA
TTTTAGAACCGTGGTCATAGTCTCATGTCTGAATCTTGCTCTTGGTTATAAACAGGTGCA
TTGTGAGACAGTAACAGATGGATTAAGCACGTTGAAGCCATGGAAGTTCAAGATCGCTTA
TGATAAACTAGTACTAGCTTGTGGTGCAGAAGCATCCACATTTGGGATTAGTGGCGTCTT
GGAAAACGCTATCTTCCTCCGTGAGGTTCATCACGCTCAGGAGATACGTAGAAAGCTTCT
TCTTAACCTCATGCTCTCCGAAGTTCCAGGTAACAAACAACAACACATATTCTTCTTCAT
ACACCAACTAAACTCATAACGTGCAACTTCGATCTTAGGCCTTGGTGGAGAGGAGAAGAA
GAGGTTGTTGCATTGCGTTGTGGTCGGAGGTGGTCCCACTGGTGTAGAGTTTAGTGGTGA
GCTGAGTGATTTCATCATGAAAGATGTTCGTCAGAGATATGCCCATGTCAAAGACGACAT
CCGTGTTACTTTGATCGAGGTAACCTTCATTGATATAAACCTAAGTTTATTATTCATAAA
ATATAATTTTGACAAATACTATTTTTCTTGGAAGGCAAGGGATATACTTTCTTCTTTTGA
CGATGGGCTCAGACAATATGCAATCAAGCAGCTAAACAAGGTTAATAAAATGCCAACTTT
AATTTTGTTTTATTTGTAACAATGTTGAGAATGTGTTAGTTTTTGACACCAGTCTGGAGT
GAAGCTTGTGCGTGGGATTGTGAAAGAAGTGAAGCCTCAAAGACTAATACTTGACGATGG
AACCGAAGTTCCTTATGGTCTCTTAGTTTGGTCAACTGGTGTTGGTCCATCTTCATTTGT
AAGGTCTCTTGATCTTCCAAAAGATCCAGGTGGAAGGTCAGTAACTCCAACATTACAGCA
ATCTTGTTCTGTTTCTTTGTTTCTTCCAAGAACCTAAATCATTCACTCTTTCTATAGGAT
TGGGATTGATGAGTGGATGCGTGTACCTTCAATACAAGACGTGTTTGCTATTGGTGACTG
TAGTGGGTATCTTGAGAGCACAGGGAAGTCAACACTTCCTGCTCTTGCACAGGTCTGAAT
GTTGTTTTAATAGAATCCCATTTTACTCATAATCAACCAAGTCTCTGGGTCAATGAAGGT
GGCTGAGAGAGAAGGCAAGTACTTGGCGAATCTACTGAACGTGATGGGGAAAGCTGGAGG
AGGAAGAGCCTTCAGCGCAAAGGACACTGAACTTGGGGAGCCGTTTGTGTACAAGCATTT
GGGAAGCATGGCTACTATTGGGAGATACAAAGCTCTCGTTGATCTCCGTGAGAGCAAGGT
ATATATAACAAAGACCATGCAATTTTCACTTAAAAACCCTAAAACACACATATAGCTAAC
TTTTGGTGGGGGGTTTTTTCTTGGGCAGCAAGGAAAAGGGATATCAATGGGTGGTTTTCT
GAGCTTTTTCATATGGAGGTCAGCGTATCTGACTCGAGTCGTCAGCTGGAGAAACCGTTT
CTACGTCTTTATTAACTGGATCACCACTTTCGTTTTCGGCCGTGACACTAGCCGTCTCTG
ATCCAACTCTTCCTCTATCT
Pro Sequence
MSWIKNLVKISPTTSSVGNLFRNHESYTLLSRFCTALQHQQQQQSQTVQE
TEVVQHRYEGLAPTKEGEKPRLLVLGSGWAGCRLMKGIDTSIYDVVCVSP
RNHMVFTPLLASTCVGTLEFRSVAEPISRIQPAISREPGSYYFLANCSRL
DSQNHEVHCETVTDGLSTLKPWKFKIAYDKLVLACGAEASTFGISGVLEN
AIFLREVHHAQEIRRKLLLNLMLSEVPGLGGEEKKRLLHCVVVGGGPTGV
EFSGELSDFIMKDVRQRYAHVKDDIRVTLIEARDILSSFDDGLRQYAIKQ
LNKSGVKLVRGIVKEVKPQRLILDDGTEVPYGLLVWSTGVGPSSFVRSLD
LPKDPGGRIGIDEWMRVPSIQDVFAIGDCSGYLESTGKSTLPALAQVAER
EGKYLANLLNVMGKAGGGRAFSAKDTELGEPFVYKHLGSMATIGRYKALV
DLRESKQGKGISMGGFLSFFIWRSAYLTRVVSWRNRFYVFINWITTFVFG
RDTSRL
mRNA Sequence
TTTGAAACTCCATCCATATCTAGAGCAACATGGCACCGTGTGCGGTCGTAACATTTTCGTTTATATACAT
ATCGTAGCAGCAATCATATATTACCAAATACGAATATTTTCCATTTATTTTGGAGAGAAAGAAGATAGTG
TGACCTGTCTTTTCTAAATCTAGCACGTAGGTTTTTATCAGACGCATAGAAGTGATGATACAGTACCAAG
GCGGCTAGTTGAACAAGAGTGTTCGTTTCTCTAACAGCTTAAGGTCAATAACATTGTGTTTATTGCTTGC
TTAGAAGTAACCTTTTTGTATCATTGTTGAATTTTTCGGGAATTCAAGAACCAAAAGAATCATGTCTTGG
ATCAAGAACCTCGTAAAGATCTCTCCGACAACTTCTTCTGTCGGAAACTTGTTCAGAAACCACGAATCCT
ACACTCTCTTGTCTCGTTTCTGCACGGCTCTGCAACATCAGCAGCAGCAACAGAGCCAGACTGTTCAAGA
AACGGAGGTCGTACAACATCGTTACGAAGGTTTGGCTCCGACAAAAGAAGGAGAGAAGCCGAGGTTGTTG
GTTCTAGGGTCGGGCTGGGCAGGTTGTCGTCTTATGAAAGGGATCGATACGAGCATTTACGACGTCGTTT
GCGTCTCTCCGAGAAACCATATGGTCTTTACTCCTCTCTTGGCTTCTACTTGCGTCGGTACGCTTGAGTT
TAGGTCCGTTGCTGAACCAATCTCTCGTATCCAACCGGCTATTTCACGTGAACCCGGTTCTTATTACTTC
CTCGCTAATTGCTCACGACTTGATTCCCAAAACCATGAGGTGCATTGTGAGACAGTAACAGATGGATTAA
GCACGTTGAAGCCATGGAAGTTCAAGATCGCTTATGATAAACTAGTACTAGCTTGTGGTGCAGAAGCATC
CACATTTGGGATTAGTGGCGTCTTGGAAAACGCTATCTTCCTCCGTGAGGTTCATCACGCTCAGGAGATA
CGTAGAAAGCTTCTTCTTAACCTCATGCTCTCCGAAGTTCCAGGCCTTGGTGGAGAGGAGAAGAAGAGGT
TGTTGCATTGCGTTGTGGTCGGAGGTGGTCCCACTGGTGTAGAGTTTAGTGGTGAGCTGAGTGATTTCAT
CATGAAAGATGTTCGTCAGAGATATGCCCATGTCAAAGACGACATCCGTGTTACTTTGATCGAGGCAAGG
GATATACTTTCTTCTTTTGACGATGGGCTCAGACAATATGCAATCAAGCAGCTAAACAAGTCTGGAGTGA
AGCTTGTGCGTGGGATTGTGAAAGAAGTGAAGCCTCAAAGACTAATACTTGACGATGGAACCGAAGTTCC
TTATGGTCTCTTAGTTTGGTCAACTGGTGTTGGTCCATCTTCATTTGTAAGGTCTCTTGATCTTCCAAAA
GATCCAGGTGGAAGGATTGGGATTGATGAGTGGATGCGTGTACCTTCAATACAAGACGTGTTTGCTATTG
GTGACTGTAGTGGGTATCTTGAGAGCACAGGGAAGTCAACACTTCCTGCTCTTGCACAGGTGGCTGAGAG
AGAAGGCAAGTACTTGGCGAATCTACTGAACGTGATGGGGAAAGCTGGAGGAGGAAGAGCCTTCAGCGCA
AAGGACACTGAACTTGGGGAGCCGTTTGTGTACAAGCATTTGGGAAGCATGGCTACTATTGGGAGATACA
AAGCTCTCGTTGATCTCCGTGAGAGCAAGCAAGGAAAAGGGATATCAATGGGTGGTTTTCTGAGCTTTTT
CATATGGAGGTCAGCGTATCTGACTCGAGTCGTCAGCTGGAGAAACCGTTTCTACGTCTTTATTAACTGG
ATCACCACTTTCGTTTTCGGCCGTGACACTAGCCGTCTCTGATCCAACTCTTCCTCTATCTCTCTCACTC
TCTTGTTTAGGTTATAATCCATTCTTATGACGCATGTGAGAAGATATAAATTAACAGATGGATAAACAAT
AAAGAAATACACAGAGATTTAATGTGGTTCACCTCTAACGGCTACGGGCAAAGAGAGATTTTATTGATGG
AGGAATTACAGAAATCTGTCTACAAGAAGATCAGATCTAGTTTATCTACGGCTGCTAACTAGGTTTAGAG
GAGGCACAAAATATATATAGTTGTGTCCCGGAAAACCCTAGCACTAGTGGGCCTCAAAAGACTAAGACCC
AACAGATTCAAGGCATTATTCAACAAATCTCCACCTTGACTTGAATCATGCATAATCAGATGTACCAGAA
TGCACTTCTTCGTGCTTAGAATACAGATGTACCAGACTCTCTCTTTGCTCAGATGTTCCGTCGAACTCAG
ATGTCAGATGTCCCGTCGGACCAGATGCTCCTCAGAGCCAGATGCCCTCACTTGGGGCAGATGCTCTCTT
CGAGCCAGATGCCCTCTTCGAGCCAGATGCCCCTCAGGGCCAAACGCCCATCAGGACCAGATTTAACAGC
TTGAGATGTTTAGCAAATCAAGACAATGCTTGAACTTTCTATGAGGAACCGGCTTAGTGAACATATCCGC
AGGATTATCAGCTGTTCCTACTGATGTGCCGTGGGGTAGCGCACCGGGCAAAACAGACATGCATGGCTTG
TTCATGGAAAGCAGTAAAGATATATGTTCATTGTTTAACTCATATCTTCCAAACCACGAGGCTTCTACGC
ATTAAATCACTTGGAGAATGTTCTCAACTCAATTACGGAGCTCCTTGAAGAAGAATCAGATCAAACGGAG
TTCATATGTGATAGTTATGCTATTTACAAATCAGGTGATCTTCAGTTCTCGCGAATTCAGACCACCCGAG
AAGCTCGAAATGGCTAACCTTCTTTCTGATGAACCAACGGTCAATTCAATCATTACAAAGGTTATTATTC
ATGTTCTAAATGTTCAAGAAAGCATTGGGCTTGATGGTTTTCAAAAAGATTCAAAAACAAGCTTGTTTGG
ACCAAATGGAGAAACCGATAAAATATTGGCTAAGGGAAAAGATGGATTTCGACCAGGCCTCAAAGGGATA
TGTCTTGGACCATATCAGGAGCATATTCTTCACTTTTCAAAGTCTTGGTCGTGGCTATATGAAGAGG