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Detail for ZS11_C08G19500.t1

Genome:
ZS11: ZS11_C08G19500.t1
ZS11_v0: BnaC08T0170900ZS
WE: WE_C01G22860.t1
WE_v0: BnaC08T0123800WE
Darmor: C08p10070.1_BnaDAR
BH: BnaA08T204400BH
Quinta: BnaC08T0130900QU
ZS2: BnaC08T145600ZS2
SW: BnaC08T160300SW
Express61: C08p014630.1_BnaEXP
Xiaoyun: BnaC08G0167600XY
P202: BnaC08G042980P202.1
BL: BnaA08T204400BH
TA: BnaA01T175600TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g16470D
RB: BnaA01T180100RB
No2127: BnaC08T0141300NO
P130: BnaC08G024890P130.2
Length: 185
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0032981(mitochondrial respiratory chain complex I assembly)
Cellular Component: GO:0016020(membrane)
Molecular Function: -
KEGG Ortholog: K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
NR Protein: XP_013725695.1
NR E-value: 7.200000e-85
NR Score: 318.5
NR Annotation: XP_013725695.1 uncharacterized protein LOC106429497 isoform X1 [Brassica napus]
SwissProt Protein: -
SwissProt E-value: Not available
SwissProt Score: Not available
SwissProt Annotation: -
CDS Sequence (565 bp)
ATGTCGAGGCTATGGGCGAGAGTTGCCGGATTGTTCAGAAGCAAGAGTTTCATCGGAGCAGACAAGACTG
GTAACAAGTACTTCTCCAGAATGGAGGAGATCGACGGTTTGGTGAAGGAGAAGAGATGGGTTGTCTTTAG
ACGAGAAGAGGACCCAACCTCTGTTCCTGTTGAATGGATATGTTGGCTGAATGGTCAGAGAAAACGAGCT
CCAACTCCAGAGGAACTGGCTGAACTTGAAGCAAGGCGTGAGCGTGTGAAGCTTAATGTTGCTCGTCTCA
AGAAAGAAGAGGAGGAAAGGAAAGCCAGAGAAGGCACTGGACGCAAAATCACGAGCATCGGTAAAGTCGA
GGGTCCAGATTTGACAAGCTTTGTTCGCCATTTTCCAGCGGATTCAAAAGGTGATAAACCAGAGGAAGCT
AGTGAAGAAGCAGATCAATCAAGGTCCAAGGAACATGAACCAGAGAGTGTTACTGCAGAACCACCCGAAC
CAAAGACAACAGAACCATCAGGGTCTGGATCATCATTTAGGCCCGGAACTTGGCAGCCACCATCCTAA
Upstream Sequence
AAACGAAGTATTGATGGATCCGGATCAAACCCGTAGTTTTTGATCCAGGCGGAGCAGACCCGAAGGAGGA
ACAACTGTGGACGTGTTGTTCTGTTAAGAGTTTTTTGGGATCAAAGAAAGAAGAAATCAATCGGCGGGAG
AGAAGCTAAGCTATGTCGAGGCTATGGGCGAGAGTTGCCGGATTGTTCAGAAGCAAGAGTTTCATCGGAG
CAGACAAGACTGGTAACAAGTACTTCTCCAGAATGGAGGAGATCGACGGTTTGGTGAAGGAGAAGAGATG
GGTTGTCTTTAGACGAGAAGAGGACCCAACCTCTGTTCCTGTTGAATGGATATGTTGGCTGAATGGTCAG
AGAAAACGAGCTCCAACTCCAGAGGAACTGGCTGAACTTGAAGCAAGGCGTGAGCGTGTGAAGCTTAATG
TTGCTCGTCTCAAGAAAGAAGAGGAGGAAAGGAAAGCCAGAGAAGGCACTGGACGCAAAATCACGAGCAT
CGGTAAAGTCGAGGGTCCAGATTTGACAAGCTTTGTTCGCCATTTTCCAGCGGATTCAAAAGGTGATAAA
CCAGAGGAAGCTAGTGAAGAAGCAGATCAATCAAGGTCCAAGGAACATGAACCAGAGAGTGTTACTGCAG
AACCACCCGAACCAAAGACAACAGAACCATCAGGGTCTGGATCATCATTTAGGCCCGGAACTTGGCAGCC
ACCATCCTAAACACATTCTCATGTTCACGCAGATAACAACCAACATGGGTGTTTTGTCCAATCATCTGTT
TGTTGTGTAGTCTATTGGTTTGAATCTTACATATGATTCAGAGAGAGCTTGTGAGGACCCTAAATTGTGC
GGCTTTTCACGTTGTTATTGACGACTTAGAAGAGTCAAAAATTGGAAGCCATCTCTTGTTTTGTTTGGTG
GGGGGTTGTCTGACTTGTCTCTTGGCATTGTGCTTGAGACTTAAATTGCTTTTGTCCTTAATAGCTTAAG
AAGAGCCTATCATTCACCCTACCTCTTCCTCGTTGACTTTTATTTATTAGGATTTAAACGATTTTTATTT
GCTGACAAGAAAAAAACGCTTTTTATTTCCTAGGC
Downstream Sequence
GCGAGTTATTGTTCCTTTCAACCTCGTTTTTTTTTTTTTAATTTTAGGTTTCGTAGGAGC
TCTGAAAATGGTTGCGTTTATAATTCATCTATATGTGTGATGATCGTGTAATGAGCACTA
GGGGATGATAATTATTTTGATACCTAAATGAAACTTACACATCTTGTTCATTCGCTTTAG
CGTAGTAACATATGTGGATTCTTTCTATTTTACAGTGAAGGAGAAGAGATGGGTTGTCTT
TAGACGAGAAGAGGACCCAACCTCTGTTCCTGGTATGCAATTGGTTTGTTTCACTTCATT
ACCTGTCTAAGCAAAGCAGTGATATCGACAGGATATGTGGGCAGACATCCATCCATTCAT
GGTTACATTTTTTTTTTGTTTGATCAATGTTGTAGTTGAATGGATATGTTGGCTGAATGG
TCAGAGAAAACGAGCTCCAACTCCAGAGGTAAGATAGAACTCTTCTTTTTAATTTCTGGT
CAGCACAAAGTGTTGTTCTTCACATGCAAGATTCTTACTAGTATCTTCTTGCCTTGATGC
TCCAGGAACTGGCTGAACTTGAAGCAAGGCGTGAGCGTGTGAAGCTTAATGTTGCTCGTA
GGTGTTTTCCACATTGTTATTACATTTTAGCATTCATTTTTTCCTGGCCGCCTGCATAAA
TTTTATGATTTTGGGGACTTTGTTTCTGGAAACTAGAGAAGTTCTGAAATGAACAAAGTC
CAGTGTTTCTTTTGCGTCTCTGTGTAGTAGCAAGTCAAGAAATTCTTGTGCTTTTGTCCA
TTTAAAGTCGCTTCAAGCTCTACGCAAATGCTTACTGTTTCTCTTTTGCCTTCAAGGTCT
CAAGAAAGAAGAGGAGGAAAGGAAAGCCAGAGAAGGCACTGGACGCAAAATCACGAGCAT
CGGTAATTTACATTTAGTTCCTACATAATTTGCTCTATTTGTTTTTATATTTTTATTAAG
TGGACGCTTAATGTTGGTTCTCTCTGTATAAAGGTAAAGTCGAGGGTCCAGATTTGACAA
GCTTTGTTCGCCATTTTCCAGCGGATTCAAAAGGTATTACATTCTCCACTGCTTCCAGTT
GACTTAGGGAGTCACCTTAGAGTTCCAAAGACTAACTTCTTAGGTTTCTATGCTCCTGTT
TTATGAAATCTCCATGTATAGTTTGACAAAGATTGTTATGGACAGGCACTCACACTTTGT
TGGATTAGAGAACTAAATCTGTCTTGATTAAGTGTCATTTTAACGAGGCCCATCTGAAGG
ATTTTGTTTATTCTTGTTCAGCTTTTCTCTGTGTTATTGTGGCTTGAACGAGAAACATCT
TGTGTATTGCTTTGTGAAGTCTGTCATTGTCATGAAGTTCTCATAGTAAAAGTGTTCCCT
TTACGTCCATTATGGTTGTGATAGCTTAGAAGTTACAGTTGTTCACTCTATGTCATTTGT
TGATTCTTGGGAGAGGTTTCTACATTTGCGAGTTTTCGTATAATTATAAAGAACTTGTTC
TTATACCATATACTCGTAGAAGTAAGACTGACAGATTAAGTGATTTTTGTTTGTTTGTTA
ATTCTTTAAGGTGATAAACCAGAGGAAGCTAGTGAAGAAGCAGATCAATCAAGGTGAGAA
TCATCATGATTCATAATATCTCCCCGCAAAAAATCATATTTTGTGTTATTTCTTCTTTCA
ATTTTGCCGAAATCAAAACACAGCATCACAGGACAACCATAACCAAATGTTATCCATGTT
GCCTTTACAGGTCCAAGGAACATGAACCAGAGAGTGTTACTGCAGAACCACCCGAACCAA
AGTAAGTCTACCTTTAAAACCTAACCTACACATTCAGACTCACCGGTATGAAACATTCTC
TCTGATTTTTACAAACCACTAGTAAGAATTTGTTCTCTATGAACATGAACTAATAAGTAA
TAATGTATTGTGTTTGGGTACTCTTGAATCCCAAACTAATAGTGATGATGATAATGCAGG
ACAACAGAACCATCAGGGTC
Pro Sequence
MSRLWARVAGLFRSKSFIGADKTGNKYFSRMEEIDGLVKEKRWVVFRREE
DPTSVPVEWICWLNGQRKRAPTPEELAELEARRERVKLNVARLKKEEEER
KAREGTGRKITSIGKVEGPDLTSFVRHFPADSKGDKPEEASEEADQSRSK
EHEPESVTAEPPEPKTTEPSGSGSSFRPGTWQPPS
mRNA Sequence
AAACGAAGTATTGATGGATCCGGATCAAACCCGTAGTTTTTGATCCAGGCGGAGCAGACCCGAAGGAGGA
ACAACTGTGGACGTGTTGTTCTGTTAAGAGTTTTTTGGGATCAAAGAAAGAAGAAATCAATCGGCGGGAG
AGAAGCTAAGCTATGTCGAGGCTATGGGCGAGAGTTGCCGGATTGTTCAGAAGCAAGAGTTTCATCGGAG
CAGACAAGACTGGTAACAAGTACTTCTCCAGAATGGAGGAGATCGACGGTTTGGTGAAGGAGAAGAGATG
GGTTGTCTTTAGACGAGAAGAGGACCCAACCTCTGTTCCTGTTGAATGGATATGTTGGCTGAATGGTCAG
AGAAAACGAGCTCCAACTCCAGAGGAACTGGCTGAACTTGAAGCAAGGCGTGAGCGTGTGAAGCTTAATG
TTGCTCGTCTCAAGAAAGAAGAGGAGGAAAGGAAAGCCAGAGAAGGCACTGGACGCAAAATCACGAGCAT
CGGTAAAGTCGAGGGTCCAGATTTGACAAGCTTTGTTCGCCATTTTCCAGCGGATTCAAAAGGTGATAAA
CCAGAGGAAGCTAGTGAAGAAGCAGATCAATCAAGGTCCAAGGAACATGAACCAGAGAGTGTTACTGCAG
AACCACCCGAACCAAAGACAACAGAACCATCAGGGTCTGGATCATCATTTAGGCCCGGAACTTGGCAGCC
ACCATCCTAAACACATTCTCATGTTCACGCAGATAACAACCAACATGGGTGTTTTGTCCAATCATCTGTT
TGTTGTGTAGTCTATTGGTTTGAATCTTACATATGATTCAGAGAGAGCTTGTGAGGACCCTAAATTGTGC
GGCTTTTCACGTTGTTATTGACGACTTAGAAGAGTCAAAAATTGGAAGCCATCTCTTGTTTTGTTTGGTG
GGGGGTTGTCTGACTTGTCTCTTGGCATTGTGCTTGAGACTTAAATTGCTTTTGTCCTTAATAGCTTAAG
AAGAGCCTATCATTCACCCTACCTCTTCCTCGTTGACTTTTATTTATTAGGATTTAAACGATTTTTATTT
GCTGACAAGAAAAAAACGCTTTTTATTTCCTAGGC