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Detail for ZS11_C08G27800.t1

Genome:
ZS11: ZS11_C08G27800.t1
ZS11_v0: BnaC08T0243900ZS
WE: WE_C08G30540.t1
WE_v0: BnaC08T0199900WE
Darmor: C08p18430.1_BnaDAR
BH: BnaC08T246300BH
Quinta: BnaC08T0199600QU
ZS2: BnaC08T220600ZS2
SW: BnaC08T243700SW
Express61: C08p020620.1_BnaEXP
Xiaoyun: BnaA08G0262100XY
P202: BnaC08G050610P202.1
BL: BnaC08T246300BH
TA: BnaA08T259800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaC08T246300RB
No2127: BnaC08T0212900NO
P130: BnaC08G032580P130.2
Length: 571
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 939.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity),GO:0052716(hydroquinone:oxygen oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: XP_022568364.1
NR E-value: Not available
NR Score: 1189.5
NR Annotation: XP_022568364.1 laccase-1 isoform X1 [Brassica napus]
SwissProt Protein: Q9LMS3|LAC1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1065.0
SwissProt Annotation: Laccase-1 OS=Arabidopsis thaliana OX=3702 GN=LAC1 PE=2 SV=1
CDS Sequence (1740 bp)
ATGATTTCGACCTTTCTGGTTCTCTTTGCAACTCTTCTCCCTTATTCTTCGGCTTCAACCACCCGTCGAT
TTCACTTTAATGTCGAGTGGAAGAAGGTAACTAGGCTGTGCCACACGAAGCAACTTTTAACGGTGAACGG
ACAATACCCTGGGCCGGCGGTGGTGGTTAACGAAGGTGACACCGTAGAAATCAAAGTGACTAACCGGATT
GCTCACAATACAACTATTCATTGGCATGGGTTAAGGCAATACCGGAGCGGTTGGGCTGATGGACCGGCTT
ACATTACGCAGTGTCCTATACGATCGAAACAATCATATACATATAGGTTCAAAGTGGAAGACCAAAGAGG
CACACTCCTTTGGCATGCACATCACTCATGGCAACGCGCCTCCGTCTACGGTGCCTTCATCATCTATCCG
AGGCAGCCTTACCCATTCTCCGGCAGCCACATCCAGTCCGAAATTCCCATTATACTCGGTGAATGGTGGA
ATGATGACGTAGACAAGGTGGAGAAGCAGATGTTGAAAACAGGAGCTGGTGCCAAAGTTTCCGACGCTTA
CACGCTTAACGGCCTTCCCGGTCCACTTTATCCTTGCTCTACCAAAGATACTTTCACCGCGAACGTGGAC
GCGGGAAAAACATACATCCTCCGCATAATCAACGCTGCTCTAAACAACGAACTCTTCTTCGCTATATCAA
ACCACACACTAACCGTAGTCGAAGTCGACGCGGTTTACACCAAACCGGTTCATACCAAAGCAATCATGAT
CGCTCCCGGTCAAACCACCACCCTCCTCCTCCGCACCAACCACCTCTCCGACGGAGAATTTCTCATAGCC
GCAACTCCTTATGTCACTTCCGTCTTCCCCTTCAACAACTCCACCACCGTCGGCTTCCTCCGTTACAACA
AGAGTAAACCGGTTAACCATCTAAACCGACGCCGGTTAATAACGACGCTATCCACACGCTCGGTCCTCCC
CGACATGCTGGACACGAAGTTCGCGACGAGATTCTCCGACAGCATCAAGAGCCTCGGGTCGGCCGAGTAC
CCGTGCAAAGTCCCCACGGCGATCGACAAGCGCGTGATCACCACGATCAGCCTCAACCTCCAAAACTGCC
CGGACAATCAAACCTGCTCCGGATACGACGGGAAGAGATTCTTCGCGTCGATGAACAACGTCTCGTTCAT
CAGACCTCCTATCTCAATCCTGGAGAGCTACTACAAGAAAAAGAGCAGAGGGGTGTTCACGCTCGACTTC
CCGGAGAAGCCTCCGAGCAGATTCGACTTCACGGGAGTCGACCCCGTGTCGGAGAACATGAACACCGAGT
TCGGAACCAAGCTGTTCGAAGTGGACTTCGGTGCGAGGTTGGAGATTGTGTTCCAGGGGACGAGTTTTTT
AAATATTGAGAACCATCCGTTACATGTGCACGGACACAACTTCTTCGTTGTCGGAAGAGGGTTCGGAAAC
TTCGACGAGGAGAAGGATCCGGAGAAGTATAACTTGGTGGATCCGCCGGAGAGGAACACGATCGCGGTGC
CGACGGGAGGATGGGCGGCGATTAGGATAAACGCTGATAATCCTGGAGTTTGGTTTATTCACTGTCATCT
CGAGCAGCATACCTCTTGGGGATTGGCTATGGGCTTTATCGTTAAAGATGGGCCTCTTCCTTCGCAGACT
CTGCTTCGTCCTCCTCGTGATCTTCCCAAGTGTTGA
Upstream Sequence
ATGATTTCGACCTTTCTGGTTCTCTTTGCAACTCTTCTCCCTTATTCTTCGGCTTCAACCACCCGTCGAT
TTCACTTTAATGTCGAGTGGAAGAAGGTAACTAGGCTGTGCCACACGAAGCAACTTTTAACGGTGAACGG
ACAATACCCTGGGCCGGCGGTGGTGGTTAACGAAGGTGACACCGTAGAAATCAAAGTGACTAACCGGATT
GCTCACAATACAACTATTCATTGGCATGGGTTAAGGCAATACCGGAGCGGTTGGGCTGATGGACCGGCTT
ACATTACGCAGTGTCCTATACGATCGAAACAATCATATACATATAGGTTCAAAGTGGAAGACCAAAGAGG
CACACTCCTTTGGCATGCACATCACTCATGGCAACGCGCCTCCGTCTACGGTGCCTTCATCATCTATCCG
AGGCAGCCTTACCCATTCTCCGGCAGCCACATCCAGTCCGAAATTCCCATTATACTCGGTGAATGGTGGA
ATGATGACGTAGACAAGGTGGAGAAGCAGATGTTGAAAACAGGAGCTGGTGCCAAAGTTTCCGACGCTTA
CACGCTTAACGGCCTTCCCGGTCCACTTTATCCTTGCTCTACCAAAGATACTTTCACCGCGAACGTGGAC
GCGGGAAAAACATACATCCTCCGCATAATCAACGCTGCTCTAAACAACGAACTCTTCTTCGCTATATCAA
ACCACACACTAACCGTAGTCGAAGTCGACGCGGTTTACACCAAACCGGTTCATACCAAAGCAATCATGAT
CGCTCCCGGTCAAACCACCACCCTCCTCCTCCGCACCAACCACCTCTCCGACGGAGAATTTCTCATAGCC
GCAACTCCTTATGTCACTTCCGTCTTCCCCTTCAACAACTCCACCACCGTCGGCTTCCTCCGTTACAACA
AGAGTAAACCGGTTAACCATCTAAACCGACGCCGGTTAATAACGACGCTATCCACACGCTCGGTCCTCCC
CGACATGCTGGACACGAAGTTCGCGACGAGATTCTCCGACAGCATCAAGAGCCTCGGGTCGGCCGAGTAC
CCGTGCAAAGTCCCCACGGCGATCGACAAGCGCGTGATCACCACGATCAGCCTCAACCTCCAAAACTGCC
CGGACAATCAAACCTGCTCCGGATACGACGGGAAGAGATTCTTCGCGTCGATGAACAACGTCTCGTTCAT
CAGACCTCCTATCTCAATCCTGGAGAGCTACTACAAGAAAAAGAGCAGAGGGGTGTTCACGCTCGACTTC
CCGGAGAAGCCTCCGAGCAGATTCGACTTCACGGGAGTCGACCCCGTGTCGGAGAACATGAACACCGAGT
TCGGAACCAAGCTGTTCGAAGTGGACTTCGGTGCGAGGTTGGAGATTGTGTTCCAGGGGACGAGTTTTTT
AAATATTGAGAACCATCCGTTACATGTGCACGGACACAACTTCTTCGTTGTCGGAAGAGGGTTCGGAAAC
TTCGACGAGGAGAAGGATCCGGAGAAGTATAACTTGGTGGATCCGCCGGAGAGGAACACGATCGCGGTGC
CGACGGGAGGATGGGCGGCGATTAGGATAAACGCTGATAATCCTGGAGTTTGGTTTATTCACTGTCATCT
CGAGCAGCATACCTCTTGGGGATTGGCTATGGGCTTTATCGTTAAAGATGGGCCTCTTCCTTCGCAGACT
CTGCTTCGTCCTCCTCGTGATCTTCCCAAGTGTTGA
Downstream Sequence
TGTAAGCAAATTTTACGAAGACTCCATTTCATTTTATCTACTCTTAGACTCTATTTTTAT
TACATGGTCATAAAATGAAATTTCGAAAAATCATAAAGCAGTATGCACAAGGTTTATTCA
TTATACACATCTTTatcagtcgtatgatactatgatgtaagatcagTGCCGGTCTTGACA
CTTTAATTTTTTTTACAATGCTCTACATTTAAATAAAAATTTGTGCTTTTATTATTCTTA
TAAAAAATCTATAATGTCTTACATATAACTACAATTATCGCTACATGGGACTTTATAGGA
TATTTTCCGGTGGTAGCGTATTACACAAATGTAATAGTAACATTTTTCAATATTTATATA
ATTTTGGGGGTTTTAGGTCGAGTGGAAGAAGGTAACTAGGCTGTGCCACACGAAGCAACT
TTTAACGGTGAACGGACAATACCCTGGGCCGGCGGTGGTGGTTAACGAAGGTGACACCGT
AGAAATCAAAGTGACTAACCGGATTGCTCACAATACAACTATTCATTGGTAAATAATAAT
TAAATCTCATGCATGCATAATTTAACGACAGTTAAACATTTTGTTAACTTACTTTATGTG
AGTAGGCATGGGTTAAGGCAATACCGGAGCGGTTGGGCTGATGGACCGGCTTACATTACG
CAGTGTCCTATACGATCGAAACAATCATATACATATAGGTTCAAAGTGGAAGACCAAAGA
GGCACACTCCTTTGGCATGCACATCACTCATGGCAACGCGCCTCCGTCTACGGTGCCTTC
ATCATCTATCCGAGGCAGCCTTACCCATTCTCCGGCAGCCACATCCAGTCCGAAATTCCC
ATTATACTCGGTACAAAATATAACTAGTTTTAATTTTTGTTTCTTATCACTCAAATCTAT
AATTTTCCCAAATTTTTAAACTAAAATTATCAAACAGCGTGTATAAACAGAAAAAGGGTA
AATGGTAAAGCTTATCACTTTTAACTTTAGTTTCTACGAGTACACAGTCAGGAGAGGGAT
CATGCATATATATATATATAACACACGTAATATTATGAATAAGTAGATGATAATCAATAT
GTATATATTAGTGCTCATATAATGGATAATTATGTATTGAGCTGTGAAACTCTAACTAAT
TATGAATTGAATTTTATCCAATTCCTTTTGATAAAACTAACTGATTTCATATAGAGTTAG
TCTGGTTTAGTGTGTGTTCCGTTCAGTTTATGTTAAATTTGGTCTAATTCAGGTTAGTTT
TATCTTGGTTCAAGACTTCAAGTTTACTCTCATTAAAAACCAATTTACAAAACATAAAAT
AAAACCAGTATAACTTTTGATCATTAATATTAGAAAGATAAAAGGAAATTTATGGAACCT
TTTACTAATAAAATAAAATCATGTTAAGAAAACCAACTTAATGGTTTGGATTATATTTTG
GTCTCCTTTGGGTTGGTTTGAGTTCAGGTGGTTTGGGTTAACTCAGTTTGGTTTGGTTTT
TGCCCACCAGGTGAATGGTGGAATGATGACGTAGACAAGGTGGAGAAGCAGATGTTGAAA
ACAGGAGCTGGTGCCAAAGTTTCCGACGCTTACACGCTTAACGGCCTTCCCGGTCCACTT
TATCCTTGCTCTACCAAAGGTCCAATCTTCTCTCTTAACCGATGGTTTAGTTCCAAATCC
GGTTTGTTTCTCATTATTAAAATTTTCAAATTGTGTGCAGATACTTTCACCGCGAACGTG
GACGCGGGAAAAACATACATCCTCCGCATAATCAACGCTGCTCTAAACAACGAACTCTTC
TTCGCTATATCAAACCACACACTAACCGTAGTCGAAGTCGACGCGGTTTACACCAAACCG
GTTCATACCAAAGCAATCATGATCGCTCCCGGTCAAACCACCACCCTCCTCCTCCGCACC
AACCACCTCTCCGACGGAGAATTTCTCATAGCCGCAACTCCTTATGTCACTTCCGTCTTC
CCCTTCAACAACTCCACCAC
Pro Sequence
MISTFLVLFATLLPYSSASTTRRFHFNVEWKKVTRLCHTKQLLTVNGQYP
GPAVVVNEGDTVEIKVTNRIAHNTTIHWHGLRQYRSGWADGPAYITQCPI
RSKQSYTYRFKVEDQRGTLLWHAHHSWQRASVYGAFIIYPRQPYPFSGSH
IQSEIPIILGEWWNDDVDKVEKQMLKTGAGAKVSDAYTLNGLPGPLYPCS
TKDTFTANVDAGKTYILRIINAALNNELFFAISNHTLTVVEVDAVYTKPV
HTKAIMIAPGQTTTLLLRTNHLSDGEFLIAATPYVTSVFPFNNSTTVGFL
RYNKSKPVNHLNRRRLITTLSTRSVLPDMLDTKFATRFSDSIKSLGSAEY
PCKVPTAIDKRVITTISLNLQNCPDNQTCSGYDGKRFFASMNNVSFIRPP
ISILESYYKKKSRGVFTLDFPEKPPSRFDFTGVDPVSENMNTEFGTKLFE
VDFGARLEIVFQGTSFLNIENHPLHVHGHNFFVVGRGFGNFDEEKDPEKY
NLVDPPERNTIAVPTGGWAAIRINADNPGVWFIHCHLEQHTSWGLAMGFI
VKDGPLPSQTLLRPPRDLPKC
mRNA Sequence
ATGATTTCGACCTTTCTGGTTCTCTTTGCAACTCTTCTCCCTTATTCTTCGGCTTCAACCACCCGTCGAT
TTCACTTTAATGTCGAGTGGAAGAAGGTAACTAGGCTGTGCCACACGAAGCAACTTTTAACGGTGAACGG
ACAATACCCTGGGCCGGCGGTGGTGGTTAACGAAGGTGACACCGTAGAAATCAAAGTGACTAACCGGATT
GCTCACAATACAACTATTCATTGGCATGGGTTAAGGCAATACCGGAGCGGTTGGGCTGATGGACCGGCTT
ACATTACGCAGTGTCCTATACGATCGAAACAATCATATACATATAGGTTCAAAGTGGAAGACCAAAGAGG
CACACTCCTTTGGCATGCACATCACTCATGGCAACGCGCCTCCGTCTACGGTGCCTTCATCATCTATCCG
AGGCAGCCTTACCCATTCTCCGGCAGCCACATCCAGTCCGAAATTCCCATTATACTCGGTGAATGGTGGA
ATGATGACGTAGACAAGGTGGAGAAGCAGATGTTGAAAACAGGAGCTGGTGCCAAAGTTTCCGACGCTTA
CACGCTTAACGGCCTTCCCGGTCCACTTTATCCTTGCTCTACCAAAGATACTTTCACCGCGAACGTGGAC
GCGGGAAAAACATACATCCTCCGCATAATCAACGCTGCTCTAAACAACGAACTCTTCTTCGCTATATCAA
ACCACACACTAACCGTAGTCGAAGTCGACGCGGTTTACACCAAACCGGTTCATACCAAAGCAATCATGAT
CGCTCCCGGTCAAACCACCACCCTCCTCCTCCGCACCAACCACCTCTCCGACGGAGAATTTCTCATAGCC
GCAACTCCTTATGTCACTTCCGTCTTCCCCTTCAACAACTCCACCACCGTCGGCTTCCTCCGTTACAACA
AGAGTAAACCGGTTAACCATCTAAACCGACGCCGGTTAATAACGACGCTATCCACACGCTCGGTCCTCCC
CGACATGCTGGACACGAAGTTCGCGACGAGATTCTCCGACAGCATCAAGAGCCTCGGGTCGGCCGAGTAC
CCGTGCAAAGTCCCCACGGCGATCGACAAGCGCGTGATCACCACGATCAGCCTCAACCTCCAAAACTGCC
CGGACAATCAAACCTGCTCCGGATACGACGGGAAGAGATTCTTCGCGTCGATGAACAACGTCTCGTTCAT
CAGACCTCCTATCTCAATCCTGGAGAGCTACTACAAGAAAAAGAGCAGAGGGGTGTTCACGCTCGACTTC
CCGGAGAAGCCTCCGAGCAGATTCGACTTCACGGGAGTCGACCCCGTGTCGGAGAACATGAACACCGAGT
TCGGAACCAAGCTGTTCGAAGTGGACTTCGGTGCGAGGTTGGAGATTGTGTTCCAGGGGACGAGTTTTTT
AAATATTGAGAACCATCCGTTACATGTGCACGGACACAACTTCTTCGTTGTCGGAAGAGGGTTCGGAAAC
TTCGACGAGGAGAAGGATCCGGAGAAGTATAACTTGGTGGATCCGCCGGAGAGGAACACGATCGCGGTGC
CGACGGGAGGATGGGCGGCGATTAGGATAAACGCTGATAATCCTGGAGTTTGGTTTATTCACTGTCATCT
CGAGCAGCATACCTCTTGGGGATTGGCTATGGGCTTTATCGTTAAAGATGGGCCTCTTCCTTCGCAGACT
CTGCTTCGTCCTCCTCGTGATCTTCCCAAGTGTTGA