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Detail for ZS11_C08G28540.t1

Genome:
ZS11: ZS11_C08G28540.t1
ZS11_v0: BnaC08T0251200ZS
WE: WE_C08G31270.t1
WE_v0: BnaC08T0207000WE
Darmor: C08p19230.1_BnaDAR
BH: BnaC08T254100BH
Quinta: BnaC08T0206900QU
ZS2: BnaC08T227200ZS2
SW: BnaC08T250600SW
Express61: C08p021290.1_BnaEXP
Xiaoyun: BnaC08G0248600XY
P202: BnaC08G051150P202.1
BL: BnaC08T254100BH
TA: BnaA08T255000TA
Da-Ae: Not available
RB: BnaC08T253100RB
No2127: BnaC08T0218800NO
P130: BnaC08G033270P130.1
Length: 301
KOG ID: KOG2969
KOG E-value: 3.620000e-142
KOG Score: 404.0
KOG Annotation: Function unknown
Biological Process: GO:0006744(ubiquinone biosynthetic process)
Cellular Component: -
Molecular Function: GO:0008289(lipid binding)
KEGG Ortholog: K18587 COQ9; ubiquinone biosynthesis protein COQ9
NR Protein: XP_013728116.1
NR E-value: 1.300000e-147
NR Score: 527.7
NR Annotation: XP_013728116.1 ubiquinone biosynthesis protein COQ9, mitochondrial isoform X1 [Brassica napus]
SwissProt Protein: Q5RJV0|COQ9_XENTR
SwissProt E-value: 4.790000e-43
SwissProt Score: 152.0
SwissProt Annotation: Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Xenopus tropicalis OX=8364 GN=coq9 PE=2 SV=1
CDS Sequence (918 bp)
ATGTACCGAACGGCGGCGAAGCGTCTTCTCGGCGCTGGTTTAACAACCAGCCGCCTCCTCCGATCCACCA
TCATCCCTTCTTCTTACACTTCCAATCTCTGCACTTCATTGATGGGTCACACCGAATCACCGATTATTAA
TCAATCGGGTCCCACGGCGGCTTCATCCTCTTCGTCTTCTTCCACGGGTACAGGGGAAGGACCTCGTAGG
AAACCAAGACCCGAGTTCGAGGAAGAGCAGGCTCGTGTTCTCTCTGCGTCTCTCCGTCACGTGGCGAGGT
TAGGTTGGACGGAGGAGGCGATGATGGCTGGTTCGAGAGACGTTGGTGTGTCTCCTTCCATTGTTGGGTC
TTTCTCCAGGAGAGAAGCTGCACTTGTCGAGTACTTCATGGATGAATGCCTACAACTGCTTATTGATAGA
GTAGACTCTGGATTGGATTTGCAAAACCTCATTCCGAGTGAACGCATCCCCAAGCTCATCAGAATCCGTT
TAGAGATGCAGGTGCCTTACATTTCAAAATGGCCTCAAGCGCTCAGCATTCAAGCGCATCCAGTGAACGT
GCCAACGAGTTTCAAGCAACGGGCAATGTTGGTTGATGAGATATGGCATACTGTTGGAGATGGAGCCTCT
GATTTGGATTGGTATGTGAAGCGCACTGTTCTTGGAGGAGTTTACTCAACCACCGAGATTTACATGCTTA
CCGATGACTCCCCAGAGTATCGTGAAACATGGGCATTCTTGGATGACAGAGTCAAAGATGCTTTTGATCT
GAAGAAAAGCATACAAGAGGCCAAGTATTTTGCACAAGACATTGGAGCTGGAGTTGGGAAATCGTTTCAA
GGACTGATGAATGGAGTTATGCAGACAATGTCCACAAGGGGTGGTGGTAGTACCTCTGCGTTTTGA
Upstream Sequence
AATCAAAGGAAGCTCCTTTAACTTCTCTTGGTAACGAACTCATCCACGTGTCATAAATCCGAACCCTTAA
CTCCGGCGACAATGTACCGAACGGCGGCGAAGCGTCTTCTCGGCGCTGGTTTAACAACCAGCCGCCTCCT
CCGATCCACCATCATCCCTTCTTCTTACACTTCCAATCTCTGCACTTCATTGATGGGTCACACCGAATCA
CCGATTATTAATCAATCGGGTCCCACGGCGGCTTCATCCTCTTCGTCTTCTTCCACGGGTACAGGGGAAG
GACCTCGTAGGAAACCAAGACCCGAGTTCGAGGAAGAGCAGGCTCGTGTTCTCTCTGCGTCTCTCCGTCA
CGTGGCGAGGTTAGGTTGGACGGAGGAGGCGATGATGGCTGGTTCGAGAGACGTTGGTGTGTCTCCTTCC
ATTGTTGGGTCTTTCTCCAGGAGAGAAGCTGCACTTGTCGAGTACTTCATGGATGAATGCCTACAACTGC
TTATTGATAGAGTAGACTCTGGATTGGATTTGCAAAACCTCATTCCGAGTGAACGCATCCCCAAGCTCAT
CAGAATCCGTTTAGAGATGCAGGTGCCTTACATTTCAAAATGGCCTCAAGCGCTCAGCATTCAAGCGCAT
CCAGTGAACGTGCCAACGAGTTTCAAGCAACGGGCAATGTTGGTTGATGAGATATGGCATACTGTTGGAG
ATGGAGCCTCTGATTTGGATTGGTATGTGAAGCGCACTGTTCTTGGAGGAGTTTACTCAACCACCGAGAT
TTACATGCTTACCGATGACTCCCCAGAGTATCGTGAAACATGGGCATTCTTGGATGACAGAGTCAAAGAT
GCTTTTGATCTGAAGAAAAGCATACAAGAGGCCAAGTATTTTGCACAAGACATTGGAGCTGGAGTTGGGA
AATCGTTTCAAGGACTGATGAATGGAGTTATGCAGACAATGTCCACAAGGGGTGGTGGTAGTACCTCTGC
GTTTTGAGAAGATCAGACCTTTAAACAATGAATTTGCTTCATTCCTTATAGTTACTCCAATATATTGATT
TGAGATATGCTATATAATAAATTATATCACTATGAATGTCTTGAAGTGTATAAGCCTTTTTGTTGAATAA
AACCATTGATTTTGTGAATGGCGATGAGTATTGTGC
Downstream Sequence
GGTGAGTCTCTGAACGCCGTAAAGTTTCCATTTTTAAGCGATTAGTTTTATCCTAATTTG
GGGAATTTTCTGTAGGCGAGGTTAGGTTGGACGGAGGAGGCGATGATGGCTGGTTCGAGA
GACGTTGGTGTGTCTCCTTCCATTGTTGGGTCTTTCTCCAGGAGAGAAGCTGCACTTGTC
GAGGTATATGTCTGTCTTCAACAACACTCTCTTTGGAAGCGATGTTGATGGGTTCTCTGT
TTGTGTACTCTTGTTCAGTACTTCATGGATGAATGCCTACAACTGCTTATTGATAGAGTA
GACTCTGGATTGGATTTGCAAAACCTCATTCCGAGTGAACGCATCCCCAAGCTCATCAGA
ATCCGTTTAGAGATGCAGGTGCCTTACATTTCAAAATGGCCTCAAGCGCTCAGCATTCAA
GTAAGTTTTGGGCTGGTTCTCTCTGTTTTGTGATAAGCTTATATGCATATATTCTGATGT
TTCGGATACATCTCCAGGCGCATCCAGTGAACGTGCCAACGAGTTTCAAGCAACGGGCAA
TGTTGGTTGATGAGATATGGCATACTGTTGGAGATGGAGCCTCTGATTTGGATTGGTATG
TGAAGCGCACTGTTCTTGGAGGAGTTTACTCAACCACCGAGATTTACATGCTTACCGATG
ACTCCCCAGGTTCTTAAACTCCTCTCTCTCAAATGCATGCGGTTGAAGAAAAATAACACA
AGTTTTGAAGTTTGATATCATTATTTCATGTTGAGCAGAGTATCGTGAAACATGGGCATT
CTTGGATGACAGAGTCAAAGATGCTTTTGATCTGAAGAAAAGCATACAAGAGGTATAAGA
ATAAAACCTTTCTTGCTATGCTTCATTCTTGTTACTGTTTACATATTTGGAATGAAAGTT
CTCACTGGAGACAAATTCACAATATTGTATGGCAGGCCAAGTATTTTGCACAAGACATTG
GAGCTGGAGTTGGGAAATCGTTTCAAGGACTGATGAATGGAGTTATGCAGACAATGTCCA
CAAGGGGTGGTGGTAGTACCTCTGCGTTTTGAGAAGATCAGACCTTTAAACAATGAATTT
GCTTCATTCCTTATAGTTACTCCAATATATTGATTTGAGATATGCTATATAATAAATTAT
ATCACTATGAATGTCTTGAAGTGTATAAGCCTTTTTGTTGAATAAAACCATTGATTTTGT
GAATGGCGATGAGTATTGTGCTATGCTATGTTTATCTGTGAAGGAACAAGAAAGAAAGTT
GTGTAATCATGGGTTCAACTTATTTAGGAAGGTTGTTTAGCGTTCGAATACAAACTATAG
GGGCTTCGTTGTAATTAATTAAAATTTAGGATAGTTGTAGAGAAAGCTTTTAAATATTCC
ACTTTGACCCCGAAAAGTTTTAGAAAAAGTCAATTTTGGATGGCAGCTATTTAGCTGAAC
CCAAGCCAAGCTAGAAACTGATTTTGGGAATATCGGGGAAGATGGTGAAGTCTTCAGAAA
TCGTGAAGAAGCTGAATCTCAGGTCACACCAAGAAGGTGGTTTCTTCTATGAAACGTTCA
GAGATTCTTCTGTCATCCTCTCCACCTCTCATCTCCCTCCCACCTGTAACTCTCTCTCAC
TCTTGTTCCATCTTGATTTGTAATCTTACTTGTGTAATGTAGTCATTAGATCCGAGTTAA
GATCGCTGATATTAGAAAATAGTATTGATTGATTTATTTTTGGAATTTACTATTTCAACA
ACCCACAAACTGTTCATCCAGCAACATTTTTTCATTTCTTAATCCCTTGTTGGATTTTAT
TACAGATCATCTAGAAAGTTTGATCCTTTTTGTTTTGTGTCTGAATCTGTGCACAGTCAA
GGTGGAGAGAGCTGTGAGCACAAGTATTTACTTTTTGCTTCCATCTGGTAACGTTTCACG
TCTTCATCGCATACCCATGGCTGAAACTTGGCACTTCTATTTGGGTGAACCCCTCACTGT
AAGTGTGTGAAGAAAAAGAA
Pro Sequence
MYRTAAKRLLGAGLTTSRLLRSTIIPSSYTSNLCTSLMGHTESPIINQSG
PTAASSSSSSSTGTGEGPRRKPRPEFEEEQARVLSASLRHVARLGWTEEA
MMAGSRDVGVSPSIVGSFSRREAALVEYFMDECLQLLIDRVDSGLDLQNL
IPSERIPKLIRIRLEMQVPYISKWPQALSIQAHPVNVPTSFKQRAMLVDE
IWHTVGDGASDLDWYVKRTVLGGVYSTTEIYMLTDDSPEYRETWAFLDDR
VKDAFDLKKSIQEAKYFAQDIGAGVGKSFQGLMNGVMQTMSTRGGGSTSA
F
mRNA Sequence
AATCAAAGGAAGCTCCTTTAACTTCTCTTGGTAACGAACTCATCCACGTGTCATAAATCCGAACCCTTAA
CTCCGGCGACAATGTACCGAACGGCGGCGAAGCGTCTTCTCGGCGCTGGTTTAACAACCAGCCGCCTCCT
CCGATCCACCATCATCCCTTCTTCTTACACTTCCAATCTCTGCACTTCATTGATGGGTCACACCGAATCA
CCGATTATTAATCAATCGGGTCCCACGGCGGCTTCATCCTCTTCGTCTTCTTCCACGGGTACAGGGGAAG
GACCTCGTAGGAAACCAAGACCCGAGTTCGAGGAAGAGCAGGCTCGTGTTCTCTCTGCGTCTCTCCGTCA
CGTGGCGAGGTTAGGTTGGACGGAGGAGGCGATGATGGCTGGTTCGAGAGACGTTGGTGTGTCTCCTTCC
ATTGTTGGGTCTTTCTCCAGGAGAGAAGCTGCACTTGTCGAGTACTTCATGGATGAATGCCTACAACTGC
TTATTGATAGAGTAGACTCTGGATTGGATTTGCAAAACCTCATTCCGAGTGAACGCATCCCCAAGCTCAT
CAGAATCCGTTTAGAGATGCAGGTGCCTTACATTTCAAAATGGCCTCAAGCGCTCAGCATTCAAGCGCAT
CCAGTGAACGTGCCAACGAGTTTCAAGCAACGGGCAATGTTGGTTGATGAGATATGGCATACTGTTGGAG
ATGGAGCCTCTGATTTGGATTGGTATGTGAAGCGCACTGTTCTTGGAGGAGTTTACTCAACCACCGAGAT
TTACATGCTTACCGATGACTCCCCAGAGTATCGTGAAACATGGGCATTCTTGGATGACAGAGTCAAAGAT
GCTTTTGATCTGAAGAAAAGCATACAAGAGGCCAAGTATTTTGCACAAGACATTGGAGCTGGAGTTGGGA
AATCGTTTCAAGGACTGATGAATGGAGTTATGCAGACAATGTCCACAAGGGGTGGTGGTAGTACCTCTGC
GTTTTGAGAAGATCAGACCTTTAAACAATGAATTTGCTTCATTCCTTATAGTTACTCCAATATATTGATT
TGAGATATGCTATATAATAAATTATATCACTATGAATGTCTTGAAGTGTATAAGCCTTTTTGTTGAATAA
AACCATTGATTTTGTGAATGGCGATGAGTATTGTGC