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DETAIL

Detail for ZS11_C08G34170.t1

Genome:
ZS11: ZS11_C08G34170.t1
ZS11_v0: BnaC04T0345200ZS
WE: WE_C07G40610.t1
WE_v0: BnaC04T0331100WE
Darmor: C04p40510.1_BnaDAR
BH: BnaC08T303500BH
Quinta: BnaC02T0376600QU
ZS2: BnaC07T293600ZS2
SW: BnaC08T298600SW
Express61: C04p028640.1_BnaEXP
Xiaoyun: BnaC07G0328900XY
P202: BnaC08G055750P202.1
BL: BnaC08T303500BH
TA: BnaC04T335500TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g11340D
RB: BnaC08T300200RB
No2127: BnaC04T0322100NO
P130: BnaC08G038600P130.1
Length: 379
KOG ID: KOG2901
KOG E-value: 9.070000e-162
KOG Score: 463.0
KOG Annotation: Function unknown
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K18164 NDUFAF7; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 7
NR Protein: CDY17734.1
NR E-value: 1.800000e-154
NR Score: 550.8
NR Annotation: CDY17734.1 BnaC08g21420D [Brassica napus]
SwissProt Protein: Q54S83|NDUF7_DICDI
SwissProt E-value: 2.070000e-42
SwissProt Score: 157.0
SwissProt Annotation: Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=midA PE=1 SV=1
CDS Sequence (1156 bp)
ATGTCATCTGCGGCCGAGTCAACAAAGAAACCCTATGACTCACTCATCGACTCTGTCTTCTCTGTTTCCT
CTTCATCAAAACTCCCTACTGCCTTTTTGTTGTCTTTCCGGATCTGCTCAAGCCTCCAATCGTCGCTTAG
GTCCGAGAATCACAAGCTGTCGCACTCCCAAGACGGCGGGGAAGAAGCTGGACCGACGAGAAACAAACGA
GAGAGAACCGCCATCCCTCACCGTAGATCCATCGACACCATCTCACTCCCCGACAATCAGACGAGCTCAA
CAAATCCCGCGTTGCAGAAACTTCAGCACCAGGACCTGAAGTGCACAGATGAAAGTAGTTCGGAGAAGAA
AGCTATAAGTTCACTAGCTGGGACACCTGTGCACTGGCACGCTACTCTTGAAGAGGCACCATCAGGAGTA
CCAACAATAATCATAGCTCATGAGTTCTATGATGCTCTTCCAGTTCATCAGTTTCAGTTTAGTATGTGTA
TCTTAAATGGACTTACTTTGCAGAAATCTCCACGAGGCTGGTGTGAGAAAATGGTTGATGTGGAAGAAGA
TTCACAGTTCCGCTTTGTTCTCTCCCCACAGCCTACACCTGCAGCCTTATATCTGGAAAAGGAGAAGCTG
GAGCATGTCGAGATCAGCCCGAAGTCAATGGATTTGACTCAAGAAATAGCCAAGAGAATAGGCTCTGATG
GAGGTGGAGCACTTATAATCGATTATGGGAAGGATGGAATCATTTTAGACAGTCTTCAGGCTATTAGAGA
ACACAAGTTTGTCAACATACTGGATAATCCAGGCTCTGCGGATCTAAGTGCTTATGTTGATTTTCCTTCG
ATAAAACACTCCGCCGAGGAAGCTTCAGAAAATGTGACAGTCCGTGGACATATGACTCAGTCTCGGTTCT
TGGGTTCGCTTGGAATAAACTTCAGAGTTGATGCGCTGCTGCAGAACTGCGATGATGAGCAAGCAGAGTC
ATTGAGGTCTGGATACTGGAGGCTTGTTGGAGATGGTGAAGCACCTTTATGGGAAGGACCTGATGAACAG
ACACCAATTGGAATGGGGGGAAAGGTATCTTACAATGGCTATTGTCAGCAGAAACCAAGGCACTCCGGCT
CCGTTCCAGTAACAAACTGA
Upstream Sequence
ATGTCATCTGCGGCCGAGTCAACAAAGAAACCCTATGACTCACTCATCGACTCTGTCTTCTCTGTTTCCT
CTTCATCAAAACTCCCTACTGCCTTTTTGTTGTCTTTCCGGATCTGCTCAAGCCTCCAATCGTCGCTTAG
GTCCGAGAATCACAAGCTGTCGCACTCCCAAGACGGCGGGGAAGAAGCTGGACCGACGAGAAACAAACGA
GAGAGAACCGCCATCCCTCACCGTAGATCCATCGACACCATCTCACTCCCCGACAATCAGACGAGCTCAA
CAAATCCCGCGTTGCAGAAACTTCAGCACCAGGACCTGAAGTGCACAGATGAAAGTAGTTCGGAGAAGAA
AGCTATAAGTTCACTAGCTGGGACACCTGTGCACTGGCACGCTACTCTTGAAGAGGCACCATCAGGAGTA
CCAACAATAATCATAGCTCATGAGTTCTATGATGCTCTTCCAGTTCATCAGTTTCAGTTTAGTATGTGTA
TCTTAAATGGACTTACTTTGCAGAAATCTCCACGAGGCTGGTGTGAGAAAATGGTTGATGTGGAAGAAGA
TTCACAGTTCCGCTTTGTTCTCTCCCCACAGCCTACACCTGCAGCCTTATATCTGGAAAAGGAGAAGCTG
GAGCATGTCGAGATCAGCCCGAAGTCAATGGATTTGACTCAAGAAATAGCCAAGAGAATAGGCTCTGATG
GAGGTGGAGCACTTATAATCGATTATGGGAAGGATGGAATCATTTTAGACAGTCTTCAGGCTATTAGAGA
ACACAAGTTTGTCAACATACTGGATAATCCAGGCTCTGCGGATCTAAGTGCTTATGTTGATTTTCCTTCG
ATAAAACACTCCGCCGAGGAAGCTTCAGAAAATGTGACAGTCCGTGGACATATGACTCAGTCTCGGTTCT
TGGGTTCGCTTGGAATAAACTTCAGAGTTGATGCGCTGCTGCAGAACTGCGATGATGAGCAAGCAGAGTC
ATTGAGGTCTGGATACTGGAGGCTTGTTGGAGATGGTGAAGCACCTTTATGGGAAGGACCTGATGAACAG
ACACCAATTGGAATGGGGGGAAAGGTATCTTACAATGGCTATTGTCAGCAGAAACCAAGGCACTCCGGCT
CCGTTCCAGTAACAAACTGA
Downstream Sequence
AGTAAACCCTAATCGTGTTCTGGTGACTAACATTCTTTCTCCGTCCAGCTACGACCTCTG
AACTTCATACTGAATCTGAAATGGTACCTCTATTAAAAGGAGACTAAAAAGCCTTCTTAG
CTATGCCACGTCAGATCAGAAAATCAACCAATCAAATTCATTTTTACTGCCATGTCATCT
GCGGCCGAGTCAACAAAGAAACCCTACGACTCACTCATCGACTTCGTCTTCTCTGTTTCC
TCTTCATCAAAACTCCCTACTGCCTTTTTTGTTGTCTTTCTGGATCTGCTCAAGCCTCCA
ATCGTCGCTTAGGTCCGAGAATCACAAGCTGTCGCACTCCCAAGACGGCGGGGAAGAAGC
TGGACCGACGAGAAACAAACGAGAGAGAATCGCCATCCCTCACCATAGATCCATCGACAC
CATCTCACTCCCCGACAATCAGACGAGCCCAACAAAGTAAACCCTAATCGTGTTCTGGTG
ATTAACATTCTTTCTCCGTCCAGCTACGATCTCTGAACTTCATCACTGAATCTGAAACGG
TACGAGTTATGTGTTTTTCGTGTGGTGTTCCTTATTAATTCAATCTCCATCAAGCATTGC
ATATACACTTGGTAGAGTGCAGTCCCGCGTTGCAGAAACTTCAGCACCAGGACCTGAAGT
GCACAGATGAAAGTAGTTCGGAGAAGAAAGCTATAAGTTCACTAGCTGGGACACCTGTGC
ACTGGCACGCTACTCTTGAAGAGGCACCATCAGGAGGCATGCATGTTTGTTACATTTACT
TATTGAGACTCTCTTATGAGGCTCTTGGCTTAATTAGCAACAGTCAACGTTGTAAGCAAT
GAAAAATATGATGATCTGCATCGTTCCTCATTGTATCTATTGTTCTCTTTTGCTTGCCTT
GGCAGTACCAACAATAATCATAGCTCATGAGTTCTATGATGCTCTTCCAGTTCATCAGTT
TCAGGTTTGTGTGATTTGCAATATAGTCTTCTCCTTTAAGTTTAGTATGTGTATCTTAAA
TGGACTTACTTTGCAGAAATCTCCACGAGGCTGGTGTGAGAAAATGGTTGATGTGGAAGA
AGATTCACAGTAAGTATTTGTATATCTATAATATGCAAAGAAAACTTCAGAGCTGATCTA
TGCGTTATTGGTTTTAGGTTCCGCTTTGTTCTCTCCCCACAGCCTACACCTGCAGCCTTA
TATCTGGTGAAACGTTGCACATGAGCTACACCTGAGGAAAAGGAGAAGCTGGAGCATGTC
GAGATCAGCCCGAAGTCAATGGATTTGACTCAAGAAATAGCCAAGAGAATAGGCTCTGAT
GGAGGTGGAGCACTTATAATCGATTATGGGAAGGATGGAATCATTTTAGACAGTCTTCAG
GTTTGTGTCCTAAAAAAAATGCTCTAACCAATGCTTATAAAGTCTTTTGTGTCTGAATCT
ATGGATATGATATAAGGCTATTAGAGAACACAAGTTTGTCAACATACTGGATAATCCAGG
CTCTGCGGATCTAAGTGCTTATGTTGATTTTCCTTCGATAAAACACTCCGCCGAGGAAGC
TTCAGGTTGGTTCATATACTCACTACTCATCATTGTAATATTAGAGAGTTATAAACGTAC
TTAAACCAAATGAAAACGTGTGTGTGTGTGTTGTTCAGAAAATGTGACAGTCCGTGGACA
TATGACTCAGTCTCGGTTCTTGGGTTCGCTTGGAATAAACTTCAGAGTTGATGCGCTGCT
GCAGAACTGCGATGATGAGCAAGCAGAGTCATTGAGGTCTGGATACTGGAGGCTTGTTGG
AGATGGTGAAGCACCTTTATGGGAAGGACCTGATGAACAGACACCAATTGGAATGGGGGG
AAAGGTATCTTACAATGGCTATTGTCAGCAGAAACCAAGGCACTCCGGCTCCGTTCCAGT
AACAAACTGAAGCTTTCAAACAAGGACACTACACTCCTTTGTTTTTTTTCCTTTGAACTT
GGCTTATCATAAATCTCAGG
Pro Sequence
MSSAAESTKKPYDSLIDSVFSVSSSSKLPTAFLLSFRICSSLQSSLRSEN
HKLSHSQDGGEEAGPTRNKRERTAIPHRRSIDTISLPDNQTSSTNPALQK
LQHQDLKCTDESSSEKKAISSLAGTPVHWHATLEEAPSGVPTIIIAHEFY
DALPVHQFQFSMCILNGLTLQKSPRGWCEKMVDVEEDSQFRFVLSPQPTP
AALYLEKEKLEHVEISPKSMDLTQEIAKRIGSDGGGALIIDYGKDGIILD
SLQAIREHKFVNILDNPGSADLSAYVDFPSIKHSAEEASENVTVRGHMTQ
SRFLGSLGINFRVDALLQNCDDEQAESLRSGYWRLVGDGEAPLWEGPDEQ
TPIGMGGKVSYNGYCQQKPRHSGSVPVTN
mRNA Sequence
ATGTCATCTGCGGCCGAGTCAACAAAGAAACCCTATGACTCACTCATCGACTCTGTCTTCTCTGTTTCCT
CTTCATCAAAACTCCCTACTGCCTTTTTGTTGTCTTTCCGGATCTGCTCAAGCCTCCAATCGTCGCTTAG
GTCCGAGAATCACAAGCTGTCGCACTCCCAAGACGGCGGGGAAGAAGCTGGACCGACGAGAAACAAACGA
GAGAGAACCGCCATCCCTCACCGTAGATCCATCGACACCATCTCACTCCCCGACAATCAGACGAGCTCAA
CAAATCCCGCGTTGCAGAAACTTCAGCACCAGGACCTGAAGTGCACAGATGAAAGTAGTTCGGAGAAGAA
AGCTATAAGTTCACTAGCTGGGACACCTGTGCACTGGCACGCTACTCTTGAAGAGGCACCATCAGGAGTA
CCAACAATAATCATAGCTCATGAGTTCTATGATGCTCTTCCAGTTCATCAGTTTCAGTTTAGTATGTGTA
TCTTAAATGGACTTACTTTGCAGAAATCTCCACGAGGCTGGTGTGAGAAAATGGTTGATGTGGAAGAAGA
TTCACAGTTCCGCTTTGTTCTCTCCCCACAGCCTACACCTGCAGCCTTATATCTGGAAAAGGAGAAGCTG
GAGCATGTCGAGATCAGCCCGAAGTCAATGGATTTGACTCAAGAAATAGCCAAGAGAATAGGCTCTGATG
GAGGTGGAGCACTTATAATCGATTATGGGAAGGATGGAATCATTTTAGACAGTCTTCAGGCTATTAGAGA
ACACAAGTTTGTCAACATACTGGATAATCCAGGCTCTGCGGATCTAAGTGCTTATGTTGATTTTCCTTCG
ATAAAACACTCCGCCGAGGAAGCTTCAGAAAATGTGACAGTCCGTGGACATATGACTCAGTCTCGGTTCT
TGGGTTCGCTTGGAATAAACTTCAGAGTTGATGCGCTGCTGCAGAACTGCGATGATGAGCAAGCAGAGTC
ATTGAGGTCTGGATACTGGAGGCTTGTTGGAGATGGTGAAGCACCTTTATGGGAAGGACCTGATGAACAG
ACACCAATTGGAATGGGGGGAAAGGTATCTTACAATGGCTATTGTCAGCAGAAACCAAGGCACTCCGGCT
CCGTTCCAGTAACAAACTGA