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Detail for ZS11_C08G39790.t1

Genome:
ZS11: ZS11_C08G39790.t1
ZS11_v0: BnaC08T0351800ZS
WE: WE_C08G42750.t1
WE_v0: BnaC08T0301300WE
Darmor: C08p30380.1_BnaDAR
BH: BnaC08T351300BH
Quinta: BnaC08T0346800QU
ZS2: BnaC08T320300ZS2
SW: BnaC08T351800SW
Express61: C08p030670.1_BnaEXP
Xiaoyun: BnaC08G0344500XY
P202: BnaC08G059890P202.1
BL: BnaC08T351300BH
TA: BnaA09T408700TA
Da-Ae: Not available
RB: BnaC08T348200RB
No2127: BnaC08T0310500NO
P130: BnaC08G043620P130.2
Length: 251
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009813(flavonoid biosynthetic process)
Cellular Component: -
Molecular Function: GO:0045430(chalcone isomerase activity),GO:0016872(intramolecular lyase activity)
KEGG Ortholog: K01859 E5.5.1.6; chalcone isomerase [EC:5.5.1.6]
NR Protein: XP_013730276.1
NR E-value: 1.800000e-134
NR Score: 483.8
NR Annotation: XP_013730276.1 chalcone--flavonone isomerase [Brassica napus]
SwissProt Protein: O22651|CFI_RAPSA
SwissProt E-value: 3.420000e-162
SwissProt Score: 451.0
SwissProt Annotation: Chalcone--flavonone isomerase OS=Raphanus sativus OX=3726 GN=CHI PE=2 SV=1
CDS Sequence (766 bp)
ATGTCTTCTTCCAACTGTCCGTCACCGTTACCCACCGTCACGAAACTTCAAGTTGATTCCGTTACTTTTC
CACCGTCCGTCATCTCACCGGCTTCCTCCAACCCTCTCTTCCTCGGTGGCGCAGGTGTGCGAGGTTTGGA
TATCCAAGGAAAATTCGTGATCTTCACCGTCATCGGAGTTTACCTAGATCCTGTCTCCGTCCCGTCACTC
TCCGTTAAGTGGAAAGGTAAAACGACAGAGGAGTTAACGGAATCCGTCCCTTTCTTCCGTGAAATCGTCA
CAGGCTCGTTTGAGAAATTCATCAAAGTGACGATGAAGCTGCCGTTAACGGGACAACAATATTCAGAGAA
AGTAACGGAGAACTGTGTGGCGATATGGAAATCGTTAGGGATTTACACAGACTCTGAGGCTAAAGCTGTG
GAGAGATTTTTGGAAGTCTTCAAAGACGAAACGTTCCCTCCTGGTGCATCCATCCTCTTCGCTCTCGCCT
CTAAAGGCTCTCTTACGGTTGCGTTTTCGAAAGATGATAGCATTCCTGAAACGGGAAAAGCGGTGATCGA
AAATAAGTTGTTGGCAGAGGCAGTTCTTGAATCGATCATTGGAAAGAACGGTGTGTCTCCTGGGGCTAGG
TTGAGTGTTGCCGAGAGATTAGCTCAGCTGATGAATAGTGACAAGGTCGAAGAAGATGCAACAAAGACTG
ATCAAGAGGAAGCTAACAATCTCCCCCTAGGAGATAAACTGGCCAAAGAGAACTGA
Upstream Sequence
AAAAAAAATACTTTTTACATTATTTATCATCATTCATCAAACCTCATCATTATCAAAATATTCAAACCTA
ACCCCAAACTCAAACCATGTCTTCTTCCAACTGTCCGTCACCGTTACCCACCGTCACGAAACTTCAAGTT
GATTCCGTTACTTTTCCACCGTCCGTCATCTCACCGGCTTCCTCCAACCCTCTCTTCCTCGGTGGCGCAG
GTGTGCGAGGTTTGGATATCCAAGGAAAATTCGTGATCTTCACCGTCATCGGAGTTTACCTAGATCCTGT
CTCCGTCCCGTCACTCTCCGTTAAGTGGAAAGGTAAAACGACAGAGGAGTTAACGGAATCCGTCCCTTTC
TTCCGTGAAATCGTCACAGGCTCGTTTGAGAAATTCATCAAAGTGACGATGAAGCTGCCGTTAACGGGAC
AACAATATTCAGAGAAAGTAACGGAGAACTGTGTGGCGATATGGAAATCGTTAGGGATTTACACAGACTC
TGAGGCTAAAGCTGTGGAGAGATTTTTGGAAGTCTTCAAAGACGAAACGTTCCCTCCTGGTGCATCCATC
CTCTTCGCTCTCGCCTCTAAAGGCTCTCTTACGGTTGCGTTTTCGAAAGATGATAGCATTCCTGAAACGG
GAAAAGCGGTGATCGAAAATAAGTTGTTGGCAGAGGCAGTTCTTGAATCGATCATTGGAAAGAACGGTGT
GTCTCCTGGGGCTAGGTTGAGTGTTGCCGAGAGATTAGCTCAGCTGATGAATAGTGACAAGGTCGAAGAA
GATGCAACAAAGACTGATCAAGAGGAAGCTAACAATCTCCCCCTAGGAGATAAACTGGCCAAAGAGAACT
GATGGAATGGGAGTTTTTTCTTGGTTTTTTAGTGCTTTATGTTTCTATATCTAATAACGTTCTGTTTAGT
TCCCATTGTATGTTTTAAATCTGTTTCTGTTCGTAAGACTTATTAAATAATCAC
Downstream Sequence
GGTTCGAAAACGCTTTAAAACACTTTCCTCCTTCGTTTTTGATTTTTATTTGTTATTGCT
AACGTACGCAGGTGTGCGAGGTTTGGATATCCAAGGAAAATTCGTGATCTTCACCGTCAT
CGGAGTTTACCTAGATCCTGTCTCCGTCCCGTCACTCTCCGTTAAGTGGAAAGGTAAAAC
GACAGAGGAGTTAACGGAATCCGTCCCTTTCTTCCGTGAAATCGTCACAGGTGCTTTTCC
TCACACCACTTACTTTACTGACACGTCATTCCAAAGTGTTTTAAGTCAAAAGGTTTCCTA
CTTTGTCATTAATTAAATAATCTCTTTTCTTTTTAACTCTTAATTAGGCTCGTTTGAGAA
ATTCATCAAAGTGACGATGAAGCTGCCGTTAACGGGACAACAATATTCAGAGAAAGTAAC
GGAGAACTGTGTGGCGATATGGAAATCGTTAGGGATTTACACAGACTCTGAGGCTAAAGC
TGTGGAGAGATTTTTGGAAGTCTTCAAAGACGAAACGTTCCCTCCTGGTGCATCCATCCT
CTTCGCTCTCGCCTCTAAAGGCTCTCTTACGGTACTTGATGCCTTCATAACTTTTTATAG
CGTTGACTTGCGTTTGCGTTTTACGTTTACATGTTATAATATGAAGCTTATGTTTCCAAA
TAGAACCATAGGTTTTGATCATAAATGCAAATGTCAATGGAAAATGAAATGTTCGATGCC
CTGCTTTATAAAGGATAGTATTAAGTTACCTAGATTTTCAATCAAAAACCAATGGATTAG
ATAGGTCTCTTCCAACTTTAGATTTGGTACTTTGTTACTAATATGTGTATTGGAAAAAGG
CTATTTGAGTCTCAATTTCGGAATATTTGGACAAGGATGGATGGACTATGACTCTATGGC
TATATCAGTTATTGGTTGAGTTGGATAGCATGGATAGATGGTCTGATACCATATAAATTT
TGATGTGTTTCCAACATAAGATCAATAGGTGATAAGTGAATTATCTCGTCAATTTGTTTC
TAACAGATAAGGTTTTCAGAATGTGAAAGTTATTAAGAAGTTTGTTTGTTTACATATAAA
TGCTAATGTAGAAAGCGTTTGAAACATGTAAGTAAGAATGTTTTTTCTTTAATGTGTTTA
GATGTAAACGCAATCGTAGTGCATACGTGATATGATTGCTTTGAAAAGTTGAATGACATG
TCTTTGGTGTGATCTGAAATGTTTGCAGGTTGCGTTTTCGAAAGATGATAGCATTCCTGA
AACGGGAAAAGCGGTGATCGAAAATAAGTTGTTGGCAGAGGCAGTTCTTGAATCGATCAT
TGGAAAGAACGGTGTGTCTCCTGGGGCTAGGTTGAGTGTTGCCGAGAGATTAGCTCAGCT
GATGAATAGTGACAAGGTCGAAGAAGATGCAACAAAGACTGATCAAGAGGAAGCTAACAA
TCTCCCCCTAGGAGATAAACTGGCCAAAGAGAACTGATGGAATGGGAGTTTTTTCTTGGT
TTTTTAGTGCTTTATGTTTCTATATCTAATAACGTTCTGTTTAGTTCCCATTGTATGTTT
TAAATCTGTTTCTGTTCGTAAGACTTATTAAATAATCACATGGAGTTGGTTCAAAAATAG
TAAAATACCAAACGAATCAAAATGTATTACCAGCTGATCTTTGCTTCTAGAGAATATAGA
TGATGCCGAGCAAAACCGGTTTTATGAGCCGTTTTTGGGTCCAAGCTGAAATTGAACCAA
AATCCGGATTACATGTGAAAGACTAAAACCTAAACAAAtactggaccccgatccaaatat
gttttaaCCTATTTGGCCAATTATATATTTGAGACACAGAAACCGAGACCTTATCAAAAA
ACCCTGTCCAACTATTATTACATCTAAAAACTTTTATTGGAATTATATTGGATGATGCAA
TATTGCAATAGTAAGTTTTCACTTATTTTTATCAAGTTTCTTGTAAAATatttatcaaac
atataaaagttttattcgtt
Pro Sequence
MSSSNCPSPLPTVTKLQVDSVTFPPSVISPASSNPLFLGGAGVRGLDIQG
KFVIFTVIGVYLDPVSVPSLSVKWKGKTTEELTESVPFFREIVTGSFEKF
IKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDSEAKAVERFLEVFKDE
TFPPGASILFALASKGSLTVAFSKDDSIPETGKAVIENKLLAEAVLESII
GKNGVSPGARLSVAERLAQLMNSDKVEEDATKTDQEEANNLPLGDKLAKE
N
mRNA Sequence
AAAAAAAATACTTTTTACATTATTTATCATCATTCATCAAACCTCATCATTATCAAAATATTCAAACCTA
ACCCCAAACTCAAACCATGTCTTCTTCCAACTGTCCGTCACCGTTACCCACCGTCACGAAACTTCAAGTT
GATTCCGTTACTTTTCCACCGTCCGTCATCTCACCGGCTTCCTCCAACCCTCTCTTCCTCGGTGGCGCAG
GTGTGCGAGGTTTGGATATCCAAGGAAAATTCGTGATCTTCACCGTCATCGGAGTTTACCTAGATCCTGT
CTCCGTCCCGTCACTCTCCGTTAAGTGGAAAGGTAAAACGACAGAGGAGTTAACGGAATCCGTCCCTTTC
TTCCGTGAAATCGTCACAGGCTCGTTTGAGAAATTCATCAAAGTGACGATGAAGCTGCCGTTAACGGGAC
AACAATATTCAGAGAAAGTAACGGAGAACTGTGTGGCGATATGGAAATCGTTAGGGATTTACACAGACTC
TGAGGCTAAAGCTGTGGAGAGATTTTTGGAAGTCTTCAAAGACGAAACGTTCCCTCCTGGTGCATCCATC
CTCTTCGCTCTCGCCTCTAAAGGCTCTCTTACGGTTGCGTTTTCGAAAGATGATAGCATTCCTGAAACGG
GAAAAGCGGTGATCGAAAATAAGTTGTTGGCAGAGGCAGTTCTTGAATCGATCATTGGAAAGAACGGTGT
GTCTCCTGGGGCTAGGTTGAGTGTTGCCGAGAGATTAGCTCAGCTGATGAATAGTGACAAGGTCGAAGAA
GATGCAACAAAGACTGATCAAGAGGAAGCTAACAATCTCCCCCTAGGAGATAAACTGGCCAAAGAGAACT
GATGGAATGGGAGTTTTTTCTTGGTTTTTTAGTGCTTTATGTTTCTATATCTAATAACGTTCTGTTTAGT
TCCCATTGTATGTTTTAAATCTGTTTCTGTTCGTAAGACTTATTAAATAATCAC