SEARCH

DETAIL

Detail for ZS11_C08G39800.t1

Genome:
ZS11: ZS11_C08G39800.t1
ZS11_v0: BnaC08T0351900ZS
WE: WE_C08G42760.t1
WE_v0: BnaC08T0301400WE
Darmor: C08p30390.1_BnaDAR
BH: BnaC08T351400BH
Quinta: BnaC08T0346900QU
ZS2: BnaC08T320400ZS2
SW: BnaC08T352000SW
Express61: C08p030680.1_BnaEXP
Xiaoyun: BnaC08G0344600XY
P202: BnaA09G045120P202.1
BL: BnaC08T351400BH
TA: BnaA09T408800TA
Da-Ae: Not available
RB: BnaC08T348300RB
No2127: BnaC08T0310600NO
P130: BnaC08G043630P130.1
Length: 304
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0009813(flavonoid biosynthetic process)
Cellular Component: -
Molecular Function: GO:0016872(intramolecular lyase activity),GO:0045430(chalcone isomerase activity)
KEGG Ortholog: K01859 E5.5.1.6; chalcone isomerase [EC:5.5.1.6]
NR Protein: XP_013730289.1
NR E-value: 6.500000e-168
NR Score: 595.1
NR Annotation: XP_013730289.1 chalcone--flavonone isomerase-like [Brassica napus]
SwissProt Protein: O22651|CFI_RAPSA
SwissProt E-value: 9.550000e-116
SwissProt Score: 336.0
SwissProt Annotation: Chalcone--flavonone isomerase OS=Raphanus sativus OX=3726 GN=CHI PE=2 SV=1
CDS Sequence (928 bp)
ATGTTTGATCAAATCATCATTTCTTCCGGCGTTCAGTCACCGTTACCCTCCGTCACGAATCTTCAAGTTG
ATTCCGTTAACTTTCCACCGTCCGTCATCTCACCGGCTTCCTCCAATCGACTCTTCCTCGCTGGCGCAGG
TGTGCAAGGTTTGGATATCCAAGGAGAGTTTGTGATCTCCACCGTCATCGGAGTTTACCTAGATCCTAAC
GCCGTAGGGAGCCTTACCTCTTTCGGTTGGGGATGCAAAACGACAGAGGAGTTAACGGAATCCGTCAATT
TCTTCCGTCATATCGTCACAGGTTCTTTTGAGAAATTCATTAAGGTGAcgatgaaactgccgttaaCGGG
ACAGCAATATTCGGAGAAAGTAACAGAGAACTGTGAGGCAATTTGGGAATCGTTAGGGATAAACTCAAAC
TCTGACATAAGCTGTGGTCctcctcccagtgcaaaacttcgttttaacaagatcactaaaaCATTTGGTC
CATCTCGGCACTATTCTAGGGGTCAAGCTGTGAAGAGATTCCTGGAAATCTTCAAGCCCAAAAAGTTCCC
TCCTGGTGCTTCCATCCTCTTCGCTATCTCCCCTAAAGGCTCTCTTACGGTTGCGTTTTCGAATGATGAT
GGCATTCCTAAAAGAGGAAACACAGCGATCGAGAATAAGTTTTTGGCAGAGGCAGTTCTTGAATCAATCA
TTGGAAAGAACGGTGTGTCTCCTGGGGCTAGGCTGAGTGTAGCTGAGAGATTAGCTCAGGTGATGAAGAA
TGAAGGCCGGGCTGAGACATTAATATTGGGCGACAAAAAATTCATGAAAAATAACGAGGTCAAAGAAGAT
GCAACAAAGACAAAGACTGATCAAGAGGAAGCTAACGATCTCTCCCTCGGAGATAAATTGGCTGAAGAAA
ACTGA
Upstream Sequence
ATCATCATCAAAACATTCAAACCTAAACCCCAAAGTCATGTTTGATCAAATCATCATTTCTTCCGGCGTT
CAGTCACCGTTACCCTCCGTCACGAATCTTCAAGTTGATTCCGTTAACTTTCCACCGTCCGTCATCTCAC
CGGCTTCCTCCAATCGACTCTTCCTCGCTGGCGCAGGTGTGCAAGGTTTGGATATCCAAGGAGAGTTTGT
GATCTCCACCGTCATCGGAGTTTACCTAGATCCTAACGCCGTAGGGAGCCTTACCTCTTTCGGTTGGGGA
TGCAAAACGACAGAGGAGTTAACGGAATCCGTCAATTTCTTCCGTCATATCGTCACAGGTTCTTTTGAGA
AATTCATTAAGGTGAcgatgaaactgccgttaaCGGGACAGCAATATTCGGAGAAAGTAACAGAGAACTG
TGAGGCAATTTGGGAATCGTTAGGGATAAACTCAAACTCTGACATAAGCTGTGGTCctcctcccagtgca
aaacttcgttttaacaagatcactaaaaCATTTGGTCCATCTCGGCACTATTCTAGGGGTCAAGCTGTGA
AGAGATTCCTGGAAATCTTCAAGCCCAAAAAGTTCCCTCCTGGTGCTTCCATCCTCTTCGCTATCTCCCC
TAAAGGCTCTCTTACGGTTGCGTTTTCGAATGATGATGGCATTCCTAAAAGAGGAAACACAGCGATCGAG
AATAAGTTTTTGGCAGAGGCAGTTCTTGAATCAATCATTGGAAAGAACGGTGTGTCTCCTGGGGCTAGGC
TGAGTGTAGCTGAGAGATTAGCTCAGGTGATGAAGAATGAAGGCCGGGCTGAGACATTAATATTGGGCGA
CAAAAAATTCATGAAAAATAACGAGGTCAAAGAAGATGCAACAAAGACAAAGACTGATCAAGAGGAAGCT
AACGATCTCTCCCTCGGAGATAAATTGGCTGAAGAAAACTGACCCTCTGGGAGATTTTTCTTGGTTTGTG
AGGGCTTTATGTTTCTATGCTTAATAACGTTATGTTTAGTTCTCATCGCATGTTTTACAATCTGCTTCTA
TTCATAATTAAATAATCACATGGAGTTGATTCAAAAATACCAAACGTATCAAAAATGTATTATCAGCTGA
TCTTGCTTCTAGGGAATAAAGATAATGCCGAGCAAAACCGGAT
Downstream Sequence
GGTTCGAAAATACTTAAAAAGCACTTTCCTCCTCCGTTTATTTATTTTATTTTATGTGTT
ATTGCTAACGTACGCAGGTGTGCAAGGTTTGGATATCCAAGGAGAGTTTGTGATCTCCAC
CGTCATCGGAGTTTACCTAGATCCTAACGCCGTAGGGAGCCTTACCTCTTTCGGTTGGGG
ATGCAAAACGACAGAGGAGTTAACGGAATCCGTCAATTTCTTCCGTCATATCGTCACAGG
TGCTTCCTCACACCACTTACTTTACTGACACGTTATTTAAAAGTGTTTTAAGTCAAAGGG
TTTCTACTTTTTTTTTGACCGTCTAAATTAATTAACTTTTTGTTTATTTTTTATAGATTT
TTGATAATATTTTACATTGTATTCTCAGTTTTTGTTTAGACATTTTGCAGATATAAGGAG
ATTTCTGATTTTTTATAAACAATTAATTCTATATTTTTGATGGTATATATTTTGTGGTGT
ATAAGGGAAACACATTATCTTACAGTTTTTATGATTGTTTTGCTCTTAATTAGGTTCTTT
TGAGAAATTCATTAAGGTGAcgatgaaactgccgttaaCGGGACAGCAATATTCGGAGAA
AGTAACAGAGAACTGTGAGGCAATTTGGGAATCGTTAGGGATAAACTCAAACTCTGACAT
AAGCTGTGGTCctcctcccagtgcaaaacttcgttttaacaagatcactaaaagtaattt
gtaaaaaaaaactaaatctatttttttttaaacttaaactctaactaaaattattttgga
accaactctaactaaaatttttaaatttcTTTTGGCCCTTGTGCAAAAGCATTTGGTCCA
TCTCGGCACTATTCTAGGGGTCAAGCTGTGAAGAGATTCCTGGAAATCTTCAAGCCCAAA
AAGTTCCCTCCTGGTGCTTCCATCCTCTTCGCTATCTCCCCTAAAGGCTCTCTTACGGTA
CTTGATGCCTTCTTAACTTTTTATAACGTTGACTTGCGTTACGTTTTCATGTTATGATAT
GGGTTTGTTTTTCAAATAGAATCATACCTTTTGAGTATAGCAAATGTCAGAGGCAAATGT
AATGTGCGATGCAATAATATTAAGTTGGAAAAAATAAGATAATAATATTAAGTTGGATCG
TAGAACAAACATGATAGCTTTGAAAGCTTTATGACATCTCTTTGGTGTGAACTAAAATGT
TTGCAGGTTGCGTTTTCGAATGATGATGGCATTCCTAAAAGAGGAAACACAGCGATCGAG
AATAAGTTTTTGGCAGAGGCAGTTCTTGAATCAATCATTGGAAAGAACGGTGTGTCTCCT
GGGGCTAGGCTGAGTGTAGCTGAGAGATTAGCTCAGGTGATGAAGAATGAAGGCCGGGCT
GAGACATTAATATTGGGCGACAAAAAATTCGTAAGTTTTTTTTATATATATAGGCCCCAA
ACTGTGGGTAAAAAATATAAAAGTTTTTAAAAAGTGTTTATGTCCCTCAAATTCTCAGAT
GAAAAATAACGAGGTCAAAGAAGATGCAACAAAGACAAAGACTGATCAAGAGGAAGCTAA
CGATCTCTCCCTCGGAGATAAATTGGCTGAAGAAAACTGACCCTCTGGGAGATTTTTCTT
GGTTTGTGAGGGCTTTATGTTTCTATGCTTAATAACGTTATGTTTAGTTCTCATCGCATG
TTTTACAATCTGCTTCTATTCATAATTAAATAATCACATGGAGTTGATTCAAAAATACCA
AACGTATCAAAAATGTATTATCAGCTGATCTTGCTTCTAGGGAATAAAGATAATGCCGAG
CAAAACCGGATTACATGTCAAAGGCTAAAACCTATACGAATACTAGACCGATCCAAATAT
TTTCAATTGGGTCGAGATGCATATTTTTGGCCCATTACACATTAGACGCAGAAAACCGGA
CCTTTCCAAAGCCTTGTCCAATTATTATTTTCCATCTAAATCAATACTATTAAAAATACA
CTAATATTTTCAAATAAATT
Pro Sequence
MFDQIIISSGVQSPLPSVTNLQVDSVNFPPSVISPASSNRLFLAGAGVQG
LDIQGEFVISTVIGVYLDPNAVGSLTSFGWGCKTTEELTESVNFFRHIVT
GSFEKFIKVTMKLPLTGQQYSEKVTENCEAIWESLGINSNSDISCGPPPS
AKLRFNKITKTFGPSRHYSRGQAVKRFLEIFKPKKFPPGASILFAISPKG
SLTVAFSNDDGIPKRGNTAIENKFLAEAVLESIIGKNGVSPGARLSVAER
LAQVMKNEGRAETLILGDKKFMKNNEVKEDATKTKTDQEEANDLSLGDKL
AEEN
mRNA Sequence
ATCATCATCAAAACATTCAAACCTAAACCCCAAAGTCATGTTTGATCAAATCATCATTTCTTCCGGCGTT
CAGTCACCGTTACCCTCCGTCACGAATCTTCAAGTTGATTCCGTTAACTTTCCACCGTCCGTCATCTCAC
CGGCTTCCTCCAATCGACTCTTCCTCGCTGGCGCAGGTGTGCAAGGTTTGGATATCCAAGGAGAGTTTGT
GATCTCCACCGTCATCGGAGTTTACCTAGATCCTAACGCCGTAGGGAGCCTTACCTCTTTCGGTTGGGGA
TGCAAAACGACAGAGGAGTTAACGGAATCCGTCAATTTCTTCCGTCATATCGTCACAGGTTCTTTTGAGA
AATTCATTAAGGTGAcgatgaaactgccgttaaCGGGACAGCAATATTCGGAGAAAGTAACAGAGAACTG
TGAGGCAATTTGGGAATCGTTAGGGATAAACTCAAACTCTGACATAAGCTGTGGTCctcctcccagtgca
aaacttcgttttaacaagatcactaaaaCATTTGGTCCATCTCGGCACTATTCTAGGGGTCAAGCTGTGA
AGAGATTCCTGGAAATCTTCAAGCCCAAAAAGTTCCCTCCTGGTGCTTCCATCCTCTTCGCTATCTCCCC
TAAAGGCTCTCTTACGGTTGCGTTTTCGAATGATGATGGCATTCCTAAAAGAGGAAACACAGCGATCGAG
AATAAGTTTTTGGCAGAGGCAGTTCTTGAATCAATCATTGGAAAGAACGGTGTGTCTCCTGGGGCTAGGC
TGAGTGTAGCTGAGAGATTAGCTCAGGTGATGAAGAATGAAGGCCGGGCTGAGACATTAATATTGGGCGA
CAAAAAATTCATGAAAAATAACGAGGTCAAAGAAGATGCAACAAAGACAAAGACTGATCAAGAGGAAGCT
AACGATCTCTCCCTCGGAGATAAATTGGCTGAAGAAAACTGACCCTCTGGGAGATTTTTCTTGGTTTGTG
AGGGCTTTATGTTTCTATGCTTAATAACGTTATGTTTAGTTCTCATCGCATGTTTTACAATCTGCTTCTA
TTCATAATTAAATAATCACATGGAGTTGATTCAAAAATACCAAACGTATCAAAAATGTATTATCAGCTGA
TCTTGCTTCTAGGGAATAAAGATAATGCCGAGCAAAACCGGAT