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Detail for ZS11_A02G49650.t1

Genome:
ZS11: ZS11_A02G49650.t1
ZS11_v0: BnaA02T0418000ZS
WE: WE_C09G12200.t1
WE_v0: BnaA02T0408700WE
Darmor: C09p11590.1_BnaDAR
BH: BnaA02T500200BH
Quinta: BnaC02T0516000QU
ZS2: BnaA02T433900ZS2
SW: BnaA02T446400SW
Express61: C02p042670.1_BnaEXP
Xiaoyun: BnaA07G0142900XY
P202: BnaA07G014410P202.1
BL: BnaA02T500200BH
TA: BnaA07T144900TA
Da-Ae: Not available
RB: BnaA02T427500RB
No2127: BnaA02T0408400NO
P130: BnaA02G044540P130.2
Length: 183
KOG ID: KOG2403
KOG E-value: 9.750000e-57
KOG Score: 189.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: -
NR Protein: XP_013701917.2
NR E-value: 2.000000e-95
NR Score: 353.6
NR Annotation: XP_013701917.2 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial-like isoform X1 [Brassica napus]
SwissProt Protein: O82663|SDHA1_ARATH
SwissProt E-value: 4.130000e-56
SwissProt Score: 189.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1
CDS Sequence (559 bp)
ATGGAACGATATGCTCCAACTGCCAAAGATCTTGCATCAAGAGATGTTGTGTCCAGATCTGTGACTATAG
AAATCAGGGAAGGTCGTGGTGTAGGATCATATCTATCTCCATTTGAATCATCTTCCACCAGAAGTTCTGA
AAGAAAGGCTTCCAGGAGACAGCTGCAATTTTTGCTGGTGTTGATGTCACCAAAGAGCCAATTCCAGTCT
TGCCCACTGTTCACTACAACATGGGTGGTATCCCAACGGCGAGATGCAGTGGTTCCTGGGCTTATGGCTG
CTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGACATTCT
TGTGTTTGGTCGTGCTTGTGCAAATAGGGTTGCCGAGATAAGCAAACCAGGTGAGACTCTAGAGGAGAAT
GCAGGAAAGAAGATAATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTA
TCAGATTAAACATGCAGCTGTCTTCCGCACCCAAGAAACATTGGAAGAAGGTTGTCAGTTGA
Upstream Sequence
ATGGAACGATATGCTCCAACTGCCAAAGATCTTGCATCAAGAGATGTTGTGTCCAGATCTGTGACTATAG
AAATCAGGGAAGGTCGTGGTGTAGGATCATATCTATCTCCATTTGAATCATCTTCCACCAGAAGTTCTGA
AAGAAAGGCTTCCAGGAGACAGCTGCAATTTTTGCTGGTGTTGATGTCACCAAAGAGCCAATTCCAGTCT
TGCCCACTGTTCACTACAACATGGGTGGTATCCCAACGGCGAGATGCAGTGGTTCCTGGGCTTATGGCTG
CTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGACATTCT
TGTGTTTGGTCGTGCTTGTGCAAATAGGGTTGCCGAGATAAGCAAACCAGGTGAGACTCTAGAGGAGAAT
GCAGGAAAGAAGATAATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTA
TCAGATTAAACATGCAGCTGTCTTCCGCACCCAAGAAACATTGGAAGAAGGTTGTCAGTTGA
Downstream Sequence
GGTATGCTTCCCTTTAAACTAGTTTTCTTTTTTTGGAGGAACTCTCATTACATGTCTTTG
AGCTGTATCCGTGCTTGATTTTGTGATACTTTAATACTCTTTTTTTTTTTTTTGGATATG
TTGCTAAAATCGGCATAAGGATCATATCTATCTCCATTTGAATCATCTTCCACCAGAAGT
TCTGAAAGAAAGGCTTCCAGGAGACAGCTGCAATTTTTGCTGGTGTTGATGTCACCAAAG
AGCCAATTCCAGTCTTGCCCACTGTTCACTACAACATGGGTGGTATCCCAACGGCGAGGT
AAGTAAGCCTTTGTAGAAACTTTGGGTGAAATTTGTGTAGAGTGGATCATGAGATGCATA
AAAGCCTCGTAGCCAAAGTAATTTTTTTTTTTTTTTGTCCTGCAGATGCAGTGGTTCCTG
GGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCCAACAGGCTTGGTG
CAAATTCTCTCCTCGACATTCTTGTGTTTGGTCGTGCTTGTGCAAATAGGGTTGCCGAGA
TAAGCAAACCAGGTCAGTCATTTTTGAGGATTTAAGAGGAAAAATCTCACTAGTTGCATT
ATTTCAAACGGTGCAGGTGAGACTCTAGAGGAGAATGCAGGAAAGAAGATAATCGAATGG
CTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGATTAAACATG
CAGCTGTCTTCCGCACCCAAGAAACATTGGAAGAAGGTAAAGTAGAAGAATCTTTTTTCT
TAATTTATAATGGATTCAGAGCTCTATGGCTCTCTCTCTCTCACCTGCAGAACCCGCCAA
TTTATTTTACACACTTATTGGTATGGAATAAAACACAGGTTGTCAGTTGATCGACAAGGC
ATGGGAAAGTTTCGAGGATGTCCAAGTTAAAGATGGGAGTTTGATATGGTAAAAACAAAC
GACACTCTACAAATGTGATCGAGATTATTGATTATCAATGTTCCAAAAAGCTCTTATTTT
ATAAAAAATGCATCAACTCTGATTTGACAGAGACAATATATAGAAACTGGAGAACCTTTT
GATAAACGCTTCCATAACAATGCATTCAGCGGAAGCACGAAAGGAAAGCAGAGGAGCACA
TGCTCGGGAGGATTTCACGGTTTGATTCCACTTCCTCGTTTAACATGCATATATATGATT
TAACACCACTCTCAAATAATATAATGACTAGAGATGGCAAACGAGCCCACCCGCAACCAA
ATGGCCCGCCCCGCCACGGGCTCAAGTTCAGTCGGGTCACAGCGGGCTGGCCCGCCGCGG
GATGCGGTATCGAGAAGCAATGTCCAATCCCGCCCCGCCTAGTGCACAGGTCTTTGCGGG
TAGGCCCGCGGGTCACCATCCAGAAGTTGAACGTCTCATTTGATGCTTAACTATAGCTTT
TGAGTCAATGCTTCTCGATACAGTCATACAGATCAACAAAAGAAGTATATGAACCTCTAT
CATACGTTTCATCTCTACGTATCTTACATAACATTACTCTTGTGTTCAATACAAACATAT
TGAACCTTATCGGGAAAACATTATTCTTGTGTTGAATGGCATGTAGTATCAACAAGAAAC
TAAAACAGAAATAATCTTTGATGCGTATGCACTGATGTGTATGCATAAGAATGACATTAA
GTAACAACACCAAATCTAAGTAATCATATCCAAGTAATGTAAATGAACACCCAAACAAAA
TCCAAACAATGTAACGTGGCCTCGGTAAAAACCTTATCGAGAAAACCCATTGGGACAAAA
CCCGACAAGGGAAAAAGAGCGCCACAAAATCCATAATGCGAATAAAAAAAAACACCAGAT
CAAAATAAAAATCAAGTTTCTTCTTCTTCAACTTCAACTATCTCTTCTTCACCATCCATT
TCATCTTCTGTAGATATTAAAAATCGAAGTTAATTAAATTTAAAGAAAATGACACCCTAA
AATATATAACAAAGTGAATA
Pro Sequence
MERYAPTAKDLASRDVVSRSVTIEIREGRGVGSYLSPFESSSTRSSERKA
SRRQLQFLLVLMSPKSQFQSCPLFTTTWVVSQRRDAVVPGLMAAGEAACA
SVHGANRLGANSLLDILVFGRACANRVAEISKPGETLEENAGKKIIEWLN
KLRHSSGSLPTSSIRLNMQLSSAPKKHWKKVVS
mRNA Sequence
ATGGAACGATATGCTCCAACTGCCAAAGATCTTGCATCAAGAGATGTTGTGTCCAGATCTGTGACTATAG
AAATCAGGGAAGGTCGTGGTGTAGGATCATATCTATCTCCATTTGAATCATCTTCCACCAGAAGTTCTGA
AAGAAAGGCTTCCAGGAGACAGCTGCAATTTTTGCTGGTGTTGATGTCACCAAAGAGCCAATTCCAGTCT
TGCCCACTGTTCACTACAACATGGGTGGTATCCCAACGGCGAGATGCAGTGGTTCCTGGGCTTATGGCTG
CTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGACATTCT
TGTGTTTGGTCGTGCTTGTGCAAATAGGGTTGCCGAGATAAGCAAACCAGGTGAGACTCTAGAGGAGAAT
GCAGGAAAGAAGATAATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTA
TCAGATTAAACATGCAGCTGTCTTCCGCACCCAAGAAACATTGGAAGAAGGTTGTCAGTTGA