SEARCH

DETAIL

Detail for ZS11_C08G61480.t1

Genome:
ZS11: ZS11_C08G61480.t1
ZS11_v0: BnaA09T0704000ZS
WE: WE_C08G65020.t1
WE_v0: BnaC08T0493800WE
Darmor: C05p02820.1_BnaDAR
BH: BnaA10T031700BH
Quinta: BnaA10T0027400QU
ZS2: BnaC05T027000ZS2
SW: BnaA10T033300SW
Express61: C05p002730.1_BnaEXP
Xiaoyun: BnaA10G0028700XY
P202: BnaA09G059800P202.1
BL: BnaA10T031700BH
TA: BnaC05T026800TA
Da-Ae: Not available
RB: BnaA08T354500RB
No2127: BnaC05T0026200NO
P130: BnaA08G032200P130.1
Length: 151
KOG ID: KOG3300
KOG E-value: 2.430000e-86
KOG Score: 250.0
KOG Annotation: Energy production and conversion; Cell cycle control, cell division, chromosome partitioning
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K11353 NDUFA13; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
NR Protein: XP_006410462.1
NR E-value: 4.000000e-65
NR Score: 252.7
NR Annotation: XP_006410462.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Eutrema salsugineum]
SwissProt Protein: O49313|NDADB_ARATH
SwissProt E-value: 1.030000e-85
SwissProt Score: 250.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana OX=3702 GN=At2g33220 PE=2 SV=1
CDS Sequence (462 bp)
ATGACGGAGGCGATGATAAGGAAGAAGCCAGGGATGGCGAGTGTGAAGGACATGCCGCTGCTTCAGGATG
GTCCACCACCGGGTGGGTTTGCACCGGTCCGATATGCTCGCCGGATATCCAATACGGGTCCTAGCGCCAT
GGCCATTTTCCTTACAGTTTCATGGTGCATTTGCTTGGGGAATGTATCAGCTCAAGCACGCTTAACTCTG
GAGTTCTTTCAGGGTGTGCTCCGGAAAAGGGCGTTGAAGGAAGAGAACTATGCTGCTCGTAGAGCTATAC
TTCCCATTCTTCAAGCTGAGGAGGATGAAAGGTTTGTGTCCGAGTGGAAAAAGTATTTAGACTACGAGGC
TGATGTAATGAAGGATGTTCCGGGATGGAAAGTTGGTGAGAACGTTTACAATTCTGGTCGTTGGATGCCA
CCGGCTACTGGTGAACTCCGTCCTGACGTTTGGTGA
Upstream Sequence
ATGACGGAGGCGATGATAAGGAAGAAGCCAGGGATGGCGAGTGTGAAGGACATGCCGCTGCTTCAGGATG
GTCCACCACCGGGTGGGTTTGCACCGGTCCGATATGCTCGCCGGATATCCAATACGGGTCCTAGCGCCAT
GGCCATTTTCCTTACAGTTTCATGGTGCATTTGCTTGGGGAATGTATCAGCTCAAGCACGCTTAACTCTG
GAGTTCTTTCAGGGTGTGCTCCGGAAAAGGGCGTTGAAGGAAGAGAACTATGCTGCTCGTAGAGCTATAC
TTCCCATTCTTCAAGCTGAGGAGGATGAAAGGTTTGTGTCCGAGTGGAAAAAGTATTTAGACTACGAGGC
TGATGTAATGAAGGATGTTCCGGGATGGAAAGTTGGTGAGAACGTTTACAATTCTGGTCGTTGGATGCCA
CCGGCTACTGGTGAACTCCGTCCTGACGTTTGGTGA
Downstream Sequence
GTCGGTCAGGGTAACAAAATCCGCAGATAACAAAAAACTAGTTACGTGTTGATTGTGGAT
TGGTCCTATAACGCCCCGACCGCCTACGGCTAATGGGCCACCCACGCCCGCTCTCTCGGC
CCGTGGGCCCATCCCGTTCCAGCGATCGGTCCGTTAATTTTTCTAAAGGCTCGAAATCAT
TGTTTACTGACCCTGCAATCACCACCCGACCTTTTCCCATGCTTTGGCCTCActtcgacG
CTATCGCGAATCACTTCCCGATAGGTCACCCATCCTTCCACTACTCCAGCTCAAGCACGC
TTAACTCTGGAGTTCTTTCAGGGTGTGCTCCGGAAAAGGTAAGTCAATTTTGTTGACATA
GATAGCCAAATCAATTCTCTTAAGCCTTTTCACATATCACAACTCGGGATGTTACAGGTT
CTTATAGAGTTTGCCATGGTTCTTTGATGTGTAGGGCGTTGAAGGAAGAGAACTATGCTG
CTCGTAGAGCTATACTTCCCATTCTTCAAGCTGAGGAGGATGAAAGGTAACGATTTAATA
TAAATTTTTGTTTTTGCAACTTTTTTTTTTTTTTTTGTAACCTTCAGACAGTAAGTAACG
ATATTTGTGTCAAATAGGTTTGTGTCCGAGTGGAAAAAGTATTTAGACTACGAGGCTGAT
GTAATGAAGGATGTTCCGGGATGGAAAGTTGGTGAGAACGTTTACAATTCTGGTCGTTGG
ATGCCACCGGCTACTGGTGAACTCCGTCCTGACGTTTGGTGATTCTCTCCTAGTTTCTCA
CAAATGCATACGATGATGATGATGATGATGATGATTATGAATGAATGTTTTAGTGAGGAT
TAATATGTTCTTGTTTTATCTTTTTCACTCGTTAATAAGAGAGAGAATGATTCAACATAC
AGTTGTTCTTGTATTGGTTCTGCTGAAACAATAATCTGTGGTTTTGTGTAATTGTTACAA
TGGTCAAGAATACTTTCATCCCATCATATGAAAAAAAATAGTGGAAATGTACAACAAAAA
CCGTCAATTAGATCAAATGCTATCAAAGAAATGAACATTTTAGGCCCTTCTCATGTAAAG
TGTTAAGTGAATGTACATTGGTCCTACTGTATCTCAACTTGTAGTACGGGTCCAAATAGT
AATATACAAAACTATTTCCCTTGTGAGTTTGATAAGACACTGGCAAGAACAAAAATGGGT
CGGTTTGGTGTTTCTTGAAAGAGAACAGAGAAGAAGAAATAGTCTTAATTCGGCGGCTGA
ATCCAAAATCACCCATGTGGGTATCTTCTTCCATATCTTTAGGTTAAGTGATGTCTGAGT
AAACGGTTGCAGGGTTTTGTGTGAGAACATGAATAACTGTTTTCAGAGGATGGGAACCAG
ACATTTACACAGTTGGGAGGAATCAGCTTTTAATGTTTTTGTTTGGACCATAGAATGAAG
AAACCAGAAGAACCCATGGTTTAGCTTCACTCACTTCATCAACACATTTTAACATATACA
AAACTTAAAATTTTATTTTCTCGTCCTTTTGTTTGTCAATTCTCTGTCCTGCTAGTTCAA
TGACTTTGCCTGCAGAGTCTCAGACTTCAAATGAAACTTGCTACTCATAAATGTCTAGTA
TGTAAATTTTTTAATTTTATATTTGGTGAAATAAAGCTACTCTGGTACCTTAAATTATTT
TGAAGTGCAAGTTGACAAATGAAAAACTTAAATAATGTTAAAGATTATATATATACTAGT
ATTATGGCCCCTGCTATGCAGGAGCACATTATATTTTAAATTTAAATGTTAGTACAAAAA
ATTATTATCATTCTAAACATATGAGTGGTATAAATATACatgtttaaaaaaatatatata
aatgttatttaaaatatttataaaaatatttaaaaattcatactcgtttaaaaaacatat
aagtcaaaattctaaaaaattaaacacacgataaaacaacaAACAATACGTAAGGTTTAT
AAAAAGGAAAGAATACACCT
Pro Sequence
MTEAMIRKKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAIF
LTVSWCICLGNVSAQARLTLEFFQGVLRKRALKEENYAARRAILPILQAE
EDERFVSEWKKYLDYEADVMKDVPGWKVGENVYNSGRWMPPATGELRPDV
W
mRNA Sequence
ATGACGGAGGCGATGATAAGGAAGAAGCCAGGGATGGCGAGTGTGAAGGACATGCCGCTGCTTCAGGATG
GTCCACCACCGGGTGGGTTTGCACCGGTCCGATATGCTCGCCGGATATCCAATACGGGTCCTAGCGCCAT
GGCCATTTTCCTTACAGTTTCATGGTGCATTTGCTTGGGGAATGTATCAGCTCAAGCACGCTTAACTCTG
GAGTTCTTTCAGGGTGTGCTCCGGAAAAGGGCGTTGAAGGAAGAGAACTATGCTGCTCGTAGAGCTATAC
TTCCCATTCTTCAAGCTGAGGAGGATGAAAGGTTTGTGTCCGAGTGGAAAAAGTATTTAGACTACGAGGC
TGATGTAATGAAGGATGTTCCGGGATGGAAAGTTGGTGAGAACGTTTACAATTCTGGTCGTTGGATGCCA
CCGGCTACTGGTGAACTCCGTCCTGACGTTTGGTGA