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Detail for ZS11_C09G04680.t1

Genome:
ZS11: ZS11_C09G04680.t1
ZS11_v0: BnaC09T0032600ZS
WE: WE_C09G04790.t1
WE_v0: BnaC09T0038000WE
Darmor: C09p04540.1_BnaDAR
BH: BnaC07T342900BH
Quinta: BnaC09T0038600QU
ZS2: BnaC09T033200ZS2
SW: BnaC07T342000SW
Express61: C09p003920.1_BnaEXP
Xiaoyun: BnaC09G0039700XY
P202: Not available
BL: BnaC07T342900BH
TA: BnaA06T330800TA
Da-Ae: Not available
RB: BnaC07T347600RB
No2127: BnaC07T0308900NO
P130: Not available
Length: 98
KOG ID: KOG3446
KOG E-value: 1.610000e-58
KOG Score: 176.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03946 NDUFA2; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
NR Protein: XP_013609398.1
NR E-value: 6.800000e-50
NR Score: 201.4
NR Annotation: XP_013609398.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Brassica oleracea var. oleracea]
SwissProt Protein: Q9FIJ2|NDUA2_ARATH
SwissProt E-value: 6.820000e-58
SwissProt Score: 176.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=3 SV=1
CDS Sequence (301 bp)
ATGGCATGGAGAGGGAACATATCGAAGTCTCTCAAAGAGCTCAGGATCCTTCTCTGTCAATCTTCTCCCG
CTAGCGCTTCCACCAGGACTTTCGTGGAGAAGAATTACAAAGAATTGAAGTCTCTAAACCCTAAGTTTCC
CTTCCTGATCCGCGAATGTAGCGGGATCCAGCCTCAGATGTGGGCTAGATATGATATGGGAGTGGAGAGG
TGTGTGAACTTGGATGGGATGAGCGAGACACAGTTTCTCAAGTCTCTTGAAGACCTTGTGAAAGCTGGAG
GAGCTACAAAAGCCTGA
Upstream Sequence
TTCAATTCTGTGAGCGATGGCATGGAGAGGGAACATATCGAAGTCTCTCAAAGAGCTCAGGATCCTTCTC
TGTCAATCTTCTCCCGCTAGCGCTTCCACCAGGACTTTCGTGGAGAAGAATTACAAAGAATTGAAGTCTC
TAAACCCTAAGTTTCCCTTCCTGATCCGCGAATGTAGCGGGATCCAGCCTCAGATGTGGGCTAGATATGA
TATGGGAGTGGAGAGGTGTGTGAACTTGGATGGGATGAGCGAGACACAGTTTCTCAAGTCTCTTGAAGAC
CTTGTGAAAGCTGGAGGAGCTACAAAAGCCTGAGGCTGTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTAT
CTAGATGATCTCGAATAAGCTAATTAACTGCAAACACTCAATTTTACATTTCCTGTCATTCTATTTACTT
TGCAACTCTCTGGTGTCTTATCGCCTTTCGATTTGAATTGTTTCTTATTTGTGTGTGTGTGTAATCATTC
CGTATGATTGTTGAAAGCATAGAAAGGAGGGAATAAACAAAAGCAAGCGTAGAGACC
Downstream Sequence
GTTCTACTCCACCCTTCCCCCTTTCATTTTCCGGTTTGATCAAACCAAATCTGTGCGATC
GGCGATTCAATTAGACCATTCAATTATTATTATTTTTTTTTAATGAGTCAGGACTTTCGT
GGAGAAGAATTACAAAGAATTGAAGTCTCTAAACCCTAAGTTTCCCTTCCTGATCCGCGA
ATGTAGCGGGATCCAGCCTCAGATGTGGGCTAGATATGGTAATCTCTCGTTGATTTTTTA
TCTGATGAATGGAGTTTAAATATATGTTTATTTGTGCATCCGTTAATATGTGATTGGGCT
TGTGGTGCAGATATGGGAGTGGAGAGGTGTGTGAACTTGGATGGGATGAGCGAGACACAG
TTTCTCAAGTCTCTTGAAGACCTTGTGAAAGCTGGAGGAGCTACAAAAGCCTGAGGCTGT
TTCTTTCTTTCTTTTTTTTTTTTTTTTTTATCTAGATGATCTCGAATAAGCTAATTAACT
GCAAACACTCAATTTTACATTTCCTGTCATTCTATTTACTTTGCAACTCTCTGGTGTCTT
ATCGCCTTTCGATTTGAATTGTTTCTTATTTGTGTGTGTGTGTAATCATTCCGTATGATT
GTTGAAAGCATAGAAAGGAGGGAATAAACAAAAGCAAGCGTAGAGACCATTTAAAAGCAA
TTATGATTATTGTGAGGTTTGTGATCGATATGACAGTCATGATTTCTCAATTATTATTGG
GAAATAACAAACTGGAAAACACATATAGGAAAGCTAATCCTTCTTTCAATCCAACTTGAT
AATTGAAACACATTAAAAAAGATCATAATGTTTGATCCTATAGAAAAATAAGAAGATCAA
AGGATTTATGATCGACAACACAAAATATAAACGTTAGCAAAGATCGTAATAGGAATATGA
GTTCTATGTGCCTCGGGCTAGCATTTCTTGATACCTCTTGAAGGACAAGAGTTTTTGGAG
CTTCATCTGCTTATGAAACCTTGAAATGAAGAGATCTGCGACATGGTCTATCTCGTCTTC
TAGCTTGAAACTTTCTCCTTCCTCTTCCTTCGAGTTCTTCACCATATCTATCACGGAACC
TTCCTCCAACTCCCCAAAATCCTCCTCTCCTTCGAACAGCGTGTGCCTCAGATCAGGATA
CTTGTCGCTTTCCTCCTCTAGTACGTCGTAACTCTCATGATGAGCCACTGTGGATGCACC
ACTTTTGTAGAGGATTACAGCCTTGCTCTCGTCTCGGTCTTGGTCTTGATCAGAATGACC
TAGGAGGTTGTGGATCTTGTTGGAAATGGAACGGAACCCCAGCTTCTTGTGTCTCACGAG
AGACAACACCGTGAGTCTTGTTTTGTTCTTTACCGCTATAGATTTAGCCTTTGCAACTGA
GCTCAAAAACGCAACGATCTGTTTCATCAATGCTGCAGCTTTCTTCATTTTTAAAATCTT
TGTAAGAGCTATAAGCTTTAACCAATAAATTGTTTATGGTGTTTGTATAATAATGTTGTA
TAAGAGGATGTTGCTTAATTAGCATGGAGAGGAACATTGGTGGTCAGAGCCTTGAAGGGT
TTATATAGGAGTCATGAGTCTTGTCGCATTGTTTGATTAACGGCTATATGGTTTGCTTAA
TGACGGAGCAATCTTCCCAAAATGCGACACGTGGAGATACACCATTTGATATAGTTGCTC
TCTAATACTTTTTTCTGTATAACCTTTATGGCCTTTATCATATGTCACGTTCCCTTTTTT
TTTTTTTTTTTTGATAACCCGAGTATCCTGGCCCCACCGAGGTGGTTCAGAGTAGAGACC
GAAGTGAGCATGGACGCTGCCAGGACGTCACCATGTGGCTCACCGGTCTTCGGTCTCGGG
TGCTGCAGTCCACATGTAAATTCCGCAGTGGTCAAGGCTCGAACCCAGGGACGGACGCTC
CAGCTGGAGCTCCTATACCACCAAGCAACTTGCATGGTTCACGTTTATCATATGTCACGT
TCCCTTTCATCCAATTGCAT
Pro Sequence
MAWRGNISKSLKELRILLCQSSPASASTRTFVEKNYKELKSLNPKFPFLI
RECSGIQPQMWARYDMGVERCVNLDGMSETQFLKSLEDLVKAGGATKA
mRNA Sequence
TTCAATTCTGTGAGCGATGGCATGGAGAGGGAACATATCGAAGTCTCTCAAAGAGCTCAGGATCCTTCTC
TGTCAATCTTCTCCCGCTAGCGCTTCCACCAGGACTTTCGTGGAGAAGAATTACAAAGAATTGAAGTCTC
TAAACCCTAAGTTTCCCTTCCTGATCCGCGAATGTAGCGGGATCCAGCCTCAGATGTGGGCTAGATATGA
TATGGGAGTGGAGAGGTGTGTGAACTTGGATGGGATGAGCGAGACACAGTTTCTCAAGTCTCTTGAAGAC
CTTGTGAAAGCTGGAGGAGCTACAAAAGCCTGAGGCTGTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTAT
CTAGATGATCTCGAATAAGCTAATTAACTGCAAACACTCAATTTTACATTTCCTGTCATTCTATTTACTT
TGCAACTCTCTGGTGTCTTATCGCCTTTCGATTTGAATTGTTTCTTATTTGTGTGTGTGTGTAATCATTC
CGTATGATTGTTGAAAGCATAGAAAGGAGGGAATAAACAAAAGCAAGCGTAGAGACC