SEARCH

DETAIL

Detail for ZS11_C09G07860.t1

Genome:
ZS11: ZS11_C09G07860.t1
ZS11_v0: BnaC09T0062800ZS
WE: WE_C09G08040.t1
WE_v0: BnaC09T0072200WE
Darmor: C09p07820.1_BnaDAR
BH: BnaA09T068500BH
Quinta: BnaC09T0067400QU
ZS2: BnaC09T064300ZS2
SW: BnaC09T036800SW
Express61: C09p006590.1_BnaEXP
Xiaoyun: BnaC09G0068700XY
P202: BnaC09G008020P202.1
BL: BnaA09T068500BH
TA: BnaA09T063000TA
Da-Ae: Not available
RB: BnaA06T296900RB
No2127: BnaC09T0033500NO
P130: BnaC09G005130P130.1
Length: 462
KOG ID: KOG1436
KOG E-value: Not available
KOG Score: 827.0
KOG Annotation: Nucleotide transport and metabolism
Biological Process: GO:0006207('de novo' pyrimidine nucleobase biosynthetic process)
Cellular Component: GO:0005737(cytoplasm),GO:0016020(membrane)
Molecular Function: GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors),GO:0004152(dihydroorotate dehydrogenase activity)
KEGG Ortholog: K00254 DHODH, pyrD; dihydroorotate dehydrogenase [EC:1.3.5.2]
NR Protein: XP_013606327.1
NR E-value: 1.100000e-264
NR Score: 917.1
NR Annotation: XP_013606327.1 PREDICTED: dihydroorotate dehydrogenase (quinone), mitochondrial-like [Brassica oleracea var. oleracea]
SwissProt Protein: P32746|PYRD_ARATH
SwissProt E-value: Not available
SwissProt Score: 872.0
SwissProt Annotation: Dihydroorotate dehydrogenase (quinone), mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PYRD PE=1 SV=2
CDS Sequence (1408 bp)
ATGGCCGGAAGGGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTATTGAAAAGGGTCTCTCCAA
ATCCTCTTGGTGGAGCGATTAGAAACTGTTCTTCTTCAGCTCCTGGGGCTTCCTCCACACCTAAAGTCCC
TCACTTTTCCAAGAAAGGAAGGATATTGACAGGAGCTACCATTGGTCTGGCTATAGCTGGAGGTGCTTAT
GTGAGTACTGCAGATGAAGCAACCTTCTGTGGGTGGCTATTCTCAGCAACAAAGGTTGTTAACCCTCTCT
TTGCTCTTCTGGACGCTGAGTTTGCTCATAAGCTGGCTGTCACGGCCGCGTCACGCGGTTGGGTGCCTAG
AGAGAAGAGGCCTGATCCACAGATCCTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAACCCAATAGGC
CTCGCTGCTGGTTTTGACAAAAACGCTGAGGCCACAGAAGGGTTGCTAGGACTTGGGTTTGGATTCGTTG
AGGTAGGCTCTGTGACTCCAGTCCCACAAGAAGGCAACTCCAAACCACGCATCTTCAGATTACGTGAAGA
TGGAGCCATTATCAATAGGTGTGGGTTCAACAGTGAAGGGATTGTTGTTGTTGCTAAGCGGTTAGGTGCT
CAGCACGGTAAAAGAATGTTGGCGGAGACGTCAGGCACTTCGTCATCTCCAAGCGATGAAGCTAAACCGG
GAGGCAAATCTGGACCGGGTATACTTGGGGTTAACCTTGGAAAGAACAAGACTAGTGAAGATGCAGCTGC
TGATTATGTCCAAGGAGTTCATAACTTATCCCAGTATGCTGATTATTTGGTTATTAATGTTTCATCACCC
AACACGGCAGGGCTGAGAATGCTTCAGGGGAGGAAACAGTTGAAGGATCTTGTGAAGAAGGTTCAAGCTG
CTAGGGATGAGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTGTC
CAGAGGAGAGCTTGAAGATATTGCAGCTGTTGCTCTTGCTCTCAAGTTGGATGGGCTGATCATATCGAAT
ACAACAGTCTCGAGGCCAGATCCTGTAAGCAACAACCCTGTGGCAACAGAGACAGGTGGTTTGAGTGGGA
AACCGCTCTTTAATCTCTCCACCAACATGTTAAGAGAGATGTACACTTTGACGCGAGGTAAGATTCCACT
GATAGGCTGCGGTGGTGTTAGCAGTGGTGAAGATGCTTATAAGAAGATAAGAGCCGGAGCTACTCTTGTT
CAGCTCTACACTGGGTTTGCCTATGGTGGACCTGCTCTCATCCCACTGATAAAGGAAGAACTGGTGAGTT
GCTTAAAAAGGGATGGGTTCAAGTCGATTCAAGAAGCCATTGGTGCAGATCACAGATGA
Upstream Sequence
TTTAGCAAACACTGAAAGATTCTTTGAAACCAGACCAACGCATAGCGTCACCTCTGTTCAAGCCGTGAGC
TTAAAAGCTAAAACCATCTTCTTACAGTTATCCAGATTGTCTGAAAAAGTCAAAATCCTTTTTGAATTCG
GTTTGCTAAATGGCCGGAAGGGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTATTGAAAAGGG
TCTCTCCAAATCCTCTTGGTGGAGCGATTAGAAACTGTTCTTCTTCAGCTCCTGGGGCTTCCTCCACACC
TAAAGTCCCTCACTTTTCCAAGAAAGGAAGGATATTGACAGGAGCTACCATTGGTCTGGCTATAGCTGGA
GGTGCTTATGTGAGTACTGCAGATGAAGCAACCTTCTGTGGGTGGCTATTCTCAGCAACAAAGGTTGTTA
ACCCTCTCTTTGCTCTTCTGGACGCTGAGTTTGCTCATAAGCTGGCTGTCACGGCCGCGTCACGCGGTTG
GGTGCCTAGAGAGAAGAGGCCTGATCCACAGATCCTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAAC
CCAATAGGCCTCGCTGCTGGTTTTGACAAAAACGCTGAGGCCACAGAAGGGTTGCTAGGACTTGGGTTTG
GATTCGTTGAGGTAGGCTCTGTGACTCCAGTCCCACAAGAAGGCAACTCCAAACCACGCATCTTCAGATT
ACGTGAAGATGGAGCCATTATCAATAGGTGTGGGTTCAACAGTGAAGGGATTGTTGTTGTTGCTAAGCGG
TTAGGTGCTCAGCACGGTAAAAGAATGTTGGCGGAGACGTCAGGCACTTCGTCATCTCCAAGCGATGAAG
CTAAACCGGGAGGCAAATCTGGACCGGGTATACTTGGGGTTAACCTTGGAAAGAACAAGACTAGTGAAGA
TGCAGCTGCTGATTATGTCCAAGGAGTTCATAACTTATCCCAGTATGCTGATTATTTGGTTATTAATGTT
TCATCACCCAACACGGCAGGGCTGAGAATGCTTCAGGGGAGGAAACAGTTGAAGGATCTTGTGAAGAAGG
TTCAAGCTGCTAGGGATGAGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCC
TGATCTGTCCAGAGGAGAGCTTGAAGATATTGCAGCTGTTGCTCTTGCTCTCAAGTTGGATGGGCTGATC
ATATCGAATACAACAGTCTCGAGGCCAGATCCTGTAAGCAACAACCCTGTGGCAACAGAGACAGGTGGTT
TGAGTGGGAAACCGCTCTTTAATCTCTCCACCAACATGTTAAGAGAGATGTACACTTTGACGCGAGGTAA
GATTCCACTGATAGGCTGCGGTGGTGTTAGCAGTGGTGAAGATGCTTATAAGAAGATAAGAGCCGGAGCT
ACTCTTGTTCAGCTCTACACTGGGTTTGCCTATGGTGGACCTGCTCTCATCCCACTGATAAAGGAAGAAC
TGGTGAGTTGCTTAAAAAGGGATGGGTTCAAGTCGATTCAAGAAGCCATTGGTGCAGATCACAGATGA
Downstream Sequence
GTAAGCAACTTTGATGGAATAATCTCTTATTAAAATTAATCTCTTTTTATAATCAAATGC
TTTATATAGTTAGTTATATCTGGTGTAGTAGAGTTAGATCAGTTTGTCTTGGCTTGAAAT
CTTTAGGGAAGGATATTGACAGGAGCTACCATTGGTCTGGCTATAGCTGGAGGTGCTTAT
GTGAGTACTGCAGATGAAGCAACCTTCTGGTACTTGTGTCTGACACATTATATGTCTTTG
TCTTTTGATCTCATTTCTAATTTCATTGTTAATTTAGTGTTCTAAAGATCGGTTTAGGCG
GCGCCTAGTTGGCGAATCGAACCGAAACAATTTTTCTATACCAACTTTTGAAAAAAAAAT
CGGCGTATACGTCCGCCTAATCAAAAATCTCATATAAAAAATCTAACGGCTGCCTAACGA
TTTCTTGAACATTATTTTACATAATCACATTTATAAAAACCTTTTACTCCATCTTGTGTG
CTGAACAGTGGGTGGCTATTCTCAGCAACAAAGGTTGTTAACCCTCTCTTTGCTCTTCTG
GACGCTGAGTTTGCTCATAAGCTGGCTGTCACGGCCGCGTCACGCGGTTGGGTGCCTAGA
GAGAAGAGGCCTGATCCACAGATCCTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAAC
CCAATAGGCCTCGCTGCTGGTTTTGACAAAAACGCTGAGGCCACAGAAGGGTTGCTAGGA
CTTGGGTTTGGATTCGTTGAGGTAGGCTCTGTGACTCCAGTCCCACAAGAAGGCAACTCC
AAACCACGCATCTTCAGATTACGTGAAGATGGGTGAGAGAATCTCATATCCACACTTACC
TATAATCAAAGGTTCATGTCTTGATGTGTTCTTGTACTTCCAGAGCCATTATCAATAGGT
GTGGGTTCAACAGTGAAGGGATTGTTGTTGTTGCTAAGCGGTTAGGTGCTCAGCACGGTA
AAAGAATGTTGGCGGAGACGTCAGGCACTTCGTCATCTCCAAGCGATGAAGCTAAACCGG
GAGGCAAATCTGGACCGGGTATACTTGGGGTTAACCTTGGAAAGAACAAGACTAGTGAAG
ATGCAGCTGCTGATTATGTCCAAGGAGTTCATAACTTATCCCAGTATGCTGATTATTTGG
TAAGAACATTGGATTCCAGTCTTACCATATTTGTTACTAATTTTTCTCTCTTTTTTTTGT
CTCTCTACAGGTTATTAATGTTTCATCACCCAACACGGCAGGGCTGAGAATGCTTCAGGG
GAGGAAACAGTTGAAGGATCTTGTGAAGAAGGTTCAAGCTGCTAGGGATGAGATGCAGTG
GGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCCTGATCTGTCCAGAGGAGA
GCTTGAAGATATTGCAGCTGTGAGTTAGAGAAAACAAAACTCAAATACTCTCCAAGTAAA
ATGGCTCTTACAACATTGTATTGTTATTGGTTTGTGTAGGTTGCTCTTGCTCTCAAGTTG
GATGGGCTGGTAAGTTATTTTCTATTCATGAACTAAACTTCTGTTTCATTCAAAGCTTCA
TGTGTTGATGATAATGTTTTTTGTAATTCTCCTGTAGATCATATCGAATACAACAGTCTC
GAGGCCAGATCCTGTAAGCAACAACCCTGTGGCAACAGAGACAGGTGGTTTGAGTGGGAA
ACCGCTCTTTAATCTCTCCACCAACATGTTAAGAGAGATGTACACTTTGACGCGAGTAAG
TTTTTTTTTATCTAGAAAGAGATGATTAACTGTTTACCAAGGAACTAAAACGTTTCTGAT
TGTGGTTATTGACTGTTTTCATGACCTCTTTACTTAGGGTAAGATTCCACTGATAGGCTG
CGGTGGTGTTAGCAGGTAAGCATCTCAACATGTTTTTAGATTGTGAGGAAAACAAAACAC
AAGAGTTAGAGTCAGATGAACTTTTTGTGTTTTTTTTTTCAGTGGTGAAGATGCTTATAA
GAAGATAAGAGCCGGAGCTA
Pro Sequence
MAGRAATSSAKWAREFLLKRVSPNPLGGAIRNCSSSAPGASSTPKVPHFS
KKGRILTGATIGLAIAGGAYVSTADEATFCGWLFSATKVVNPLFALLDAE
FAHKLAVTAASRGWVPREKRPDPQILGLEVWGRKFSNPIGLAAGFDKNAE
ATEGLLGLGFGFVEVGSVTPVPQEGNSKPRIFRLREDGAIINRCGFNSEG
IVVVAKRLGAQHGKRMLAETSGTSSSPSDEAKPGGKSGPGILGVNLGKNK
TSEDAAADYVQGVHNLSQYADYLVINVSSPNTAGLRMLQGRKQLKDLVKK
VQAARDEMQWGDDGPPPLLVKIAPDLSRGELEDIAAVALALKLDGLIISN
TTVSRPDPVSNNPVATETGGLSGKPLFNLSTNMLREMYTLTRGKIPLIGC
GGVSSGEDAYKKIRAGATLVQLYTGFAYGGPALIPLIKEELVSCLKRDGF
KSIQEAIGADHR
mRNA Sequence
TTTAGCAAACACTGAAAGATTCTTTGAAACCAGACCAACGCATAGCGTCACCTCTGTTCAAGCCGTGAGC
TTAAAAGCTAAAACCATCTTCTTACAGTTATCCAGATTGTCTGAAAAAGTCAAAATCCTTTTTGAATTCG
GTTTGCTAAATGGCCGGAAGGGCTGCGACATCGTCGGCTAAATGGGCGAGAGAGTTTTTATTGAAAAGGG
TCTCTCCAAATCCTCTTGGTGGAGCGATTAGAAACTGTTCTTCTTCAGCTCCTGGGGCTTCCTCCACACC
TAAAGTCCCTCACTTTTCCAAGAAAGGAAGGATATTGACAGGAGCTACCATTGGTCTGGCTATAGCTGGA
GGTGCTTATGTGAGTACTGCAGATGAAGCAACCTTCTGTGGGTGGCTATTCTCAGCAACAAAGGTTGTTA
ACCCTCTCTTTGCTCTTCTGGACGCTGAGTTTGCTCATAAGCTGGCTGTCACGGCCGCGTCACGCGGTTG
GGTGCCTAGAGAGAAGAGGCCTGATCCACAGATCCTGGGACTTGAAGTTTGGGGAAGGAAGTTTTCAAAC
CCAATAGGCCTCGCTGCTGGTTTTGACAAAAACGCTGAGGCCACAGAAGGGTTGCTAGGACTTGGGTTTG
GATTCGTTGAGGTAGGCTCTGTGACTCCAGTCCCACAAGAAGGCAACTCCAAACCACGCATCTTCAGATT
ACGTGAAGATGGAGCCATTATCAATAGGTGTGGGTTCAACAGTGAAGGGATTGTTGTTGTTGCTAAGCGG
TTAGGTGCTCAGCACGGTAAAAGAATGTTGGCGGAGACGTCAGGCACTTCGTCATCTCCAAGCGATGAAG
CTAAACCGGGAGGCAAATCTGGACCGGGTATACTTGGGGTTAACCTTGGAAAGAACAAGACTAGTGAAGA
TGCAGCTGCTGATTATGTCCAAGGAGTTCATAACTTATCCCAGTATGCTGATTATTTGGTTATTAATGTT
TCATCACCCAACACGGCAGGGCTGAGAATGCTTCAGGGGAGGAAACAGTTGAAGGATCTTGTGAAGAAGG
TTCAAGCTGCTAGGGATGAGATGCAGTGGGGTGATGATGGTCCTCCTCCTCTTCTTGTGAAGATTGCTCC
TGATCTGTCCAGAGGAGAGCTTGAAGATATTGCAGCTGTTGCTCTTGCTCTCAAGTTGGATGGGCTGATC
ATATCGAATACAACAGTCTCGAGGCCAGATCCTGTAAGCAACAACCCTGTGGCAACAGAGACAGGTGGTT
TGAGTGGGAAACCGCTCTTTAATCTCTCCACCAACATGTTAAGAGAGATGTACACTTTGACGCGAGGTAA
GATTCCACTGATAGGCTGCGGTGGTGTTAGCAGTGGTGAAGATGCTTATAAGAAGATAAGAGCCGGAGCT
ACTCTTGTTCAGCTCTACACTGGGTTTGCCTATGGTGGACCTGCTCTCATCCCACTGATAAAGGAAGAAC
TGGTGAGTTGCTTAAAAAGGGATGGGTTCAAGTCGATTCAAGAAGCCATTGGTGCAGATCACAGATGA