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Detail for ZS11_C09G10900.t1

Genome:
ZS11: ZS11_C09G10900.t1
ZS11_v0: BnaC09T0090800ZS
WE: WE_C09G11280.t1
WE_v0: BnaC09T0099000WE
Darmor: C09p10810.1_BnaDAR
BH: BnaA06T283500BH
Quinta: BnaC09T0093700QU
ZS2: BnaC09T092000ZS2
SW: BnaC09T066100SW
Express61: C09p008970.1_BnaEXP
Xiaoyun: BnaC09G0094300XY
P202: BnaC09G011770P202.1
BL: BnaA06T283500BH
TA: BnaA06T271700TA
Da-Ae: Not available
RB: BnaA06T286400RB
No2127: BnaC09T0060000NO
P130: BnaC09G007770P130.1
Length: 153
KOG ID: KOG3389
KOG E-value: 3.680000e-100
KOG Score: 285.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0022900(electron transport chain)
Cellular Component: GO:0005747(mitochondrial respiratory chain complex I)
Molecular Function: -
KEGG Ortholog: K03937 NDUFS4; NADH dehydrogenase (ubiquinone) Fe-S protein 4
NR Protein: XP_013711875.1
NR E-value: 4.300000e-83
NR Score: 312.4
NR Annotation: XP_013711875.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Brassica napus]
SwissProt Protein: Q9FJW4|NDUS4_ARATH
SwissProt E-value: 1.560000e-99
SwissProt Score: 285.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FRO1 PE=1 SV=1
CDS Sequence (468 bp)
ATGGCGCTTCGTGCAACTCAATCGACTGCTCGTATGGCGGCGACGCTGCGTCGCGTAGCTAGGCCTTTCT
CAACGGACGCGGTGGTGGAGTCGGATTACAAGCGTGGGGAGATCGGTAAGGTCTCGGGAATCCCAGAGGA
GCATCTTTCCCGCAAGGTGATAATATACTCACCAGCTCGAACTGCGACCCAGCAAGGATCTGGCAAACTT
GGCAAATGGAAGATCGACTTCGTCTCCACCTTAAAGTGGGAGAATCCGTTGATGGGATGGACCTCTACAG
GTGACCCTTATGCCAACGTTGGTGACTCCGCTCTTTCTTTTGATTCTGAGGATGCTGCCAAGTCCTTTGC
TGACCGTCATGGCTGGGATTATACTGTCAAGAAGCCCAAAACGCCACTGCTGAAGCCTAAGTCTTACTCG
GACAACTTCAAGTGGAAAGGCAATCCTCAGCCTGAGAAGTGA
Upstream Sequence
TCGCAAAGCTCTTGGGGGAGTTTCTAGATTTCTCCATTTGTGTGACACGATGGCGCTTCGTGCAACTCAA
TCGACTGCTCGTATGGCGGCGACGCTGCGTCGCGTAGCTAGGCCTTTCTCAACGGACGCGGTGGTGGAGT
CGGATTACAAGCGTGGGGAGATCGGTAAGGTCTCGGGAATCCCAGAGGAGCATCTTTCCCGCAAGGTGAT
AATATACTCACCAGCTCGAACTGCGACCCAGCAAGGATCTGGCAAACTTGGCAAATGGAAGATCGACTTC
GTCTCCACCTTAAAGTGGGAGAATCCGTTGATGGGATGGACCTCTACAGGTGACCCTTATGCCAACGTTG
GTGACTCCGCTCTTTCTTTTGATTCTGAGGATGCTGCCAAGTCCTTTGCTGACCGTCATGGCTGGGATTA
TACTGTCAAGAAGCCCAAAACGCCACTGCTGAAGCCTAAGTCTTACTCGGACAACTTCAAGTGGAAAGGC
AATCCTCAGCCTGAGAAGTGATCTTCTTCTTCCTTCATTTCTGGAGAGAAACCTCTTTTGATAAATAAAT
AAATAAAAGCTCTCGTGGTTTACTTCTTATTTTAGCATCTCTGAGCTTTTTCTCTGAACTTTATTATCCA
TGGTTGGATTCGTTTTTTACGTTTTTCTTACCATAACAATAATATGATATGAAATGATGGTGATAAAATA
ATAAACGCTCTTCTGATATTTCATCAAGCTTTCTGGTC
Downstream Sequence
GGTAAAAAGCATTCCGAATTTATTTTTTTGTTGGAGAAATTGAGATAGATCGGGTGATCT
TTGGCAGGTGATAATATACTCACCAGCTCGAACTGCGACCCAGCAAGGATCTGGCAAACT
TGGCAAATGGAAGATCGACTTCGTCTCCACCTTAAAGTCTCTTCCTTCCTTCAATCTCTT
TTAGTTTTGTTTTGTAGTTAACTTTAAAAAAAAAAGAATATTCTGTTAATGTTATGCCCT
CTTTTGTTAATGATATGTTTGTTAGGTGGGAGAATCCGTTGATGGGATGGACCTCTACAG
GTGACCCTTATGCCAACGTTGGTGACTCCGCTCTTTCTTTTGATTCTGAGGATGCTGCCA
AGTCCTTTGCTGACCGTCATGGCTGGGATTATACTGTATGTTTCTTTCCTTCTTTCTTAT
AACTAGTTACCCTCTCACCTTTTTTTCCATATTTTTATGAGTTCTCATGCCAGGTCAAGA
AGCCCAAAACGCCACTGCTGAAGGTTAGTGTATCTATCTCTTTTTTTTTTTAGCTAATTC
CACTGGATGTTGATTTGTTTTTTTTTTTTTTTTAACTCATCATCATCATAATATGAAGAT
ACATGTTACTTTCTCTCTCTCTCTCTCTCTCTGTTTCATTCTTCAGTTTGAAGTTTTCAC
CTAACCTTATGATGGTTGTTCTCATCTAACCATAAACTGCAGCCTAAGTCTTACTCGGAC
AACTTCAAGTGGAAAGGCAATCCTCAGCCTGAGAAGTGATCTTCTTCTTCCTTCATTTCT
GGAGAGAAACCTCTTTTGATAAATAAATAAATAAAAGCTCTCGTGGTTTACTTCTTATTT
TAGCATCTCTGAGCTTTTTCTCTGAACTTTATTATCCATGGTTGGATTCGTTTTTTACGT
TTTTCTTACCATAACAATAATATGATATGAAATGATGGTGATAAAATAATAAACGCTCTT
CTGATATTTCATCAAGCTTTCTGGTCATTTACTAGTCTACTTCTCAATAATTATCATGAG
GATGATAAACACTCTTATCATGATGTTTCATCAAACTGTGATGTATATGTAAACAGGGCA
CAACAATATTTTGGATTAAAAAATAATAAAGATAAAGAGATGGGATCGAGAACACACCAT
CCTTCGAGCATACCGGCTTAGGTGGGTTATTAAAGAAACTGAAAATGATTGAGCCGTTAA
TTACGTTACGTCTGCTTAACTAAGCCAAATGGAATTATGTATCAGTCATTGGCTTATTAA
CTTCATAGATATGATGATTGACGAAAGAGGCCGACCAAATGAATTGCCAAACATATTTTA
AAGAAAGAAACTACCTTTGCAAATGAAGCAATTGCCATCCAATAATCACCGTTTGTTTTA
AACCGCTTAAGCATCAGCATTTGGTTAGTTGGCCGGTGGTTTACGTCTAACTTCTTAATA
TGAAACCTTATGATTGCATGCATCGAAAACTTTATGATATTACGTAAAAACTTAATGATA
AATCTCGTTCGAGAATAACTCTTAAAAGATCTCAAATATTTAAAACGTTCAAGATGTTGA
AAATATTTATTGAGACTGGATCTTCAATAAAGCATCTATGATAAATAACATCGCTTTACA
CATTAACTTTCAATGTTGTCGGATAGTGCTTTAAAAATATCTATGCTTTTTTGAAGAGTT
CTCTCATGAGGATCCAAACTCCGGAATGCTATGCAAACCTGGCCTCCACCCACCACCACC
TCTTCCTCTTCCTCCTCCGTGACTCGTCCTCATAACACCGTCTCCATCGACTTCTCCGTT
AACCTATAACAGACGGTCGAGTTAAATCAAGCATCCGTAGGGACAAGAATAGTTTAACAT
GTCTTTAGACCAAATCTATGCATGTGAAAGATGTGCATTGGCATATATGGTCAAGTGACC
CCTTAAAAGTCTTACAAAAATATTGTATGATCCAAACTAAAACATTTAATTAAAACCTAC
TTCAAATATTCTACATGACC
Pro Sequence
MALRATQSTARMAATLRRVARPFSTDAVVESDYKRGEIGKVSGIPEEHLS
RKVIIYSPARTATQQGSGKLGKWKIDFVSTLKWENPLMGWTSTGDPYANV
GDSALSFDSEDAAKSFADRHGWDYTVKKPKTPLLKPKSYSDNFKWKGNPQ
PEK
mRNA Sequence
TCGCAAAGCTCTTGGGGGAGTTTCTAGATTTCTCCATTTGTGTGACACGATGGCGCTTCGTGCAACTCAA
TCGACTGCTCGTATGGCGGCGACGCTGCGTCGCGTAGCTAGGCCTTTCTCAACGGACGCGGTGGTGGAGT
CGGATTACAAGCGTGGGGAGATCGGTAAGGTCTCGGGAATCCCAGAGGAGCATCTTTCCCGCAAGGTGAT
AATATACTCACCAGCTCGAACTGCGACCCAGCAAGGATCTGGCAAACTTGGCAAATGGAAGATCGACTTC
GTCTCCACCTTAAAGTGGGAGAATCCGTTGATGGGATGGACCTCTACAGGTGACCCTTATGCCAACGTTG
GTGACTCCGCTCTTTCTTTTGATTCTGAGGATGCTGCCAAGTCCTTTGCTGACCGTCATGGCTGGGATTA
TACTGTCAAGAAGCCCAAAACGCCACTGCTGAAGCCTAAGTCTTACTCGGACAACTTCAAGTGGAAAGGC
AATCCTCAGCCTGAGAAGTGATCTTCTTCTTCCTTCATTTCTGGAGAGAAACCTCTTTTGATAAATAAAT
AAATAAAAGCTCTCGTGGTTTACTTCTTATTTTAGCATCTCTGAGCTTTTTCTCTGAACTTTATTATCCA
TGGTTGGATTCGTTTTTTACGTTTTTCTTACCATAACAATAATATGATATGAAATGATGGTGATAAAATA
ATAAACGCTCTTCTGATATTTCATCAAGCTTTCTGGTC