SEARCH

DETAIL

Detail for ZS11_C09G11600.t1

Genome:
ZS11: ZS11_C09G11600.t1
ZS11_v0: BnaC09T0096700ZS
WE: WE_C09G12020.t1
WE_v0: BnaC09T0105300WE
Darmor: C07p25030.1_BnaDAR
BH: BnaC02T437800BH
Quinta: BnaC07T0192100QU.1
ZS2: BnaC07T190800ZS2
SW: BnaC07T221100SW
Express61: C07p009300.1_BnaEXP
Xiaoyun: BnaC07G0221800XY
P202: BnaC07G060090P202.2
BL: BnaC02T437800BH
TA: BnaA07T144900TA
Da-Ae: Not available
RB: BnaC07T225300RB
No2127: BnaC07T0206000NO.1
P130: BnaC02G069030P130.6
Length: 66
KOG ID: KOG2403
KOG E-value: 4.270000e-38
KOG Score: 134.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016491(oxidoreductase activity)
KEGG Ortholog: -
NR Protein: XP_020883788.1
NR E-value: 5.300000e-30
NR Score: 134.8
NR Annotation: XP_020883788.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Arabidopsis lyrata subsp. lyrata]
SwissProt Protein: O82663|SDHA1_ARATH
SwissProt E-value: 1.810000e-37
SwissProt Score: 134.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1
CDS Sequence (203 bp)
ATGCATTCAGCGGAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGG
ATGGAGAATGGATGAAGCATACATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGT
TCACATGGACACTCGAGAGGATGAGATTGACACTTTCCCTCCCAAAGCTGGCGTCTATTGA
Upstream Sequence
ATGCATTCAGCGGAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGG
ATGGAGAATGGATGAAGCATACATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGT
TCACATGGACACTCGAGAGGATGAGATTGACACTTTCCCTCCCAAAGCTGGCGTCTATTGA
Downstream Sequence
GGTTCCATTCTCTTCCCCTCAAAACATTCATATATATATATATATACGACTATATCATAT
AGCGATGAAGATGATGATGATAGAGAACCACTACAAGAAAACATCAAGGATTCTGAGGGA
AAAAATCGTCGGAATTTCGTCGGAATATCGTTATTCCGACGCAATTCCGACGAAATACGT
CGTCGGAAATAATTCCTCGGAATTTCTTTTTTCCTCTGAAATCCCTCGGAATTCCGAGGA
AATAAATTTCCGAGGAAATTCCGAGGATCCCTTGTTTGTCGGAAAAGTCCTCGGAATATA
CCGAGGTAGAACTTCGTCGGGATAATTCCTCGGAAGTTCATCGATCGATGCGTGTTTGGA
CATATATACATCGATCGATAGGAGTATACCGACGGACTTTTTCCTCGGTTTATTCCGAGG
AACTGTTCCTCGCTATATTCGAGGATCCGTTCCTCGAATTTTCCGAGGAGTTGTCCTCGG
AAAATTCGAGGAAATGTCCCTCGCTATGTTTTTAAAAAAGCGGATCGATCGATGCGTTTT
GTTCAAAAACGCATCGATCGATGTAGTGAAAAATATAATTAATTTCTCGAAATGTAAAAA
ATATTAATTTTTGAAAAAATAAAATTTCTGAAATTTAAATTGAAAATATGAAATTAAAAG
TAAAATTGAAATCATACTAATTAATATTCAAAGTTTCACAAATAAAAATAAAACATTCGA
GATTGGGAAAAAAACTACGGGTCTGGCACGTCAGAACACCTCGTTCGGGTACATCCTCTG
CATCATCTCCATCATTTGCTGGTTCAGCCTCCTCTGTGCCTCATAGCCCGCTGTTGAGCC
GCCATCTGGGTCTCCAACAAAGATATTCGATCATCTTTGTCCTTCAACCTGAGCCATAAG
TACTTCGATCAACAAAGGGCGGTGGTGCGAAGAAGGAGGAACCGACCGGGTGCGACGACC
CAAACCGAACAAACGTCCCTTCTTCTTTGGAACCGACTGAATAGAAAAAAAGCCAAATTT
AGAAATTTAAACCAAGAAATAAATGAATTGAACTTAAAAAAAAAAAAACTTACGGATTCA
ACGAATTTGTTGATTGAAACCGACAAGTTGGTTGAAGCCGTCGAGCGTCATCCTCGGTTT
GAAGCTGAGACACTTCGCCTACCACCTGAGTTTGGACCAGGTCGACCACGTCCCTCACAA
GACCGTCATCAATCTGGCGGTCTGCTTGTTGGTATACGCCCCCCCCATTAGGGCGAGATC
ATCGACCGGCTCGCCATCATTTTCTTCCGACCTGAAAAAAAACATAAAATTAAAGAAACA
TTAGAAATTAGAAGAAATGCACAATAAATTTAAATTCTGAAACTCAAATAATTGAAGAAA
AGGCGGTTGAACTTACCATGCGATCTCCGAGAGTGGCAATAGATTGAGCACCCAAGTTAT
GCTTGTAGATGCCCTTCCCTTTACGGTCGCTCCTGCGGTTGGTGGAGTTGGTGGAAGAAG
TTTCTTTTCTCCTCCTTATCCCAATGCGCACACAACTCCTTCCAGACCGTATCGTTCATC
GACTTTGGGACCTTTTAATTAAAAAAAAAAGTAAAAGTTTAATAAATTAAAAAATAGTTT
AATAAATTAAAAATTGTTTAATAAATTAAATCGAACCTTATTGATTTCCCACTTCTTCTT
CCACTCGTGGATCTGCTTCCCATAGTTGTCCATTACTTTATGGGCCGAAGTGGTGATAGA
TAAAGAGCGTCTCATCGAATTCCAGTTGAACTCTTGCTGAAAAAAACACAATTAGTAGAA
AATTTATATTAAAGATTAAAAATATAAGTAAAAAATTAGAATACTTACATACTGAGCGAA
ACCACAGAACCTGCTTGTCGGTTGGGAAGTGAGTGAAAGTCGGATGTCCACTGTCGAGGG
CCGAGTACATCATACGGTTGATCCATGCGCTGATCCCGTTCGCGGATAGGTTGAACCTTA
TTAAAAGAACAAGCGGTTAA
Pro Sequence
MHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDEKVRLEYRPVHMD
TREDEIDTFPPKAGVY
mRNA Sequence
ATGCATTCAGCGGAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGG
ATGGAGAATGGATGAAGCATACATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGT
TCACATGGACACTCGAGAGGATGAGATTGACACTTTCCCTCCCAAAGCTGGCGTCTATTGA