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Detail for ZS11_C09G11760.t1

Genome:
ZS11: ZS11_C09G11760.t1
ZS11_v0: BnaC09T0098000ZS
WE: WE_C09G12200.t1
WE_v0: BnaC09T0106500WE
Darmor: C07p25030.1_BnaDAR
BH: BnaA09T118000BH
Quinta: BnaC09T0100300QU
ZS2: BnaC09T099200ZS2
SW: BnaC09T073200SW
Express61: C09p009620.1_BnaEXP
Xiaoyun: BnaC09G0101900XY
P202: BnaC09G012980P202.1
BL: BnaA09T118000BH
TA: BnaA09T089500TA
Da-Ae: Not available
RB: BnaA09T096200RB
No2127: BnaC09T0066900NO
P130: BnaC09G008610P130.6
Length: 619
KOG ID: KOG2403
KOG E-value: Not available
KOG Score: 1176.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006099(tricarboxylic acid cycle),GO:0022900(electron transport chain)
Cellular Component: -
Molecular Function: GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors),GO:0050660(flavin adenine dinucleotide binding),GO:0016491(oxidoreductase activity)
KEGG Ortholog: K00234 SDHA, SDH1; succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
NR Protein: XP_013613099.1
NR E-value: Not available
NR Score: 1224.2
NR Annotation: XP_013613099.1 PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial-like isoform X1 [Brassica oleracea var. oleracea]
SwissProt Protein: O82663|SDHA1_ARATH
SwissProt E-value: Not available
SwissProt Score: 1176.0
SwissProt Annotation: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1
CDS Sequence (1886 bp)
ATGTGGCGCTGCGTCTCTCGTAGCCTTCGAGCTCCTTCTTCATCAAGGACCTCACTCTCTGGATCTCGCT
TTTCTAGATTCTTCTCCTCCTCTTCTCAGACGGGTGATTACACGATAGTGGATCACACCTATGACGCGGT
GGTTGTTGGAGCTGGTGGTGCTGGTCTCAGAGCGGCCATTGGATTATCTGAGCATGGCTTTAACACCGCT
TGCATTACCAAGCTTTTCCCCACACGCTCCCACACCGTCGCTGCTCAGGGTGGTATAAACGCTGCACTGG
GAAACATGTCTGAAGATGACTGGAGATGGCACATGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTGA
TCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCAAAAGCTGTGATTGAACTTGAGAACTACGGCCTT
CCCTTTTCTCGTACTGAAGAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCA
AAGGTGGTCAGGCCTATCGTTGTGCTTGCGCTGCGGATCGAACTGGACATGCTCTCTTGCATACCTTATA
TGGACAAGCTATGAAGCATAACACACAGTTCTTTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGT
GATGGTACTTGCCAGGGTGTAATTGCACTAAACATGGAAGACGGAACACTGCATCGTTTCCGCTCCGCAC
AAACAATTTTGGCCACTGGGGGTTATGGCAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGG
AGATGGCAATGCCATGGTTGCACGTGCCGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAGTTCCACCCA
ACTGGTATATATGGAGCCGGATGTCTCATCACTGAAGGATCTCGAGGTGAAGGTGGGATCCTTAGAAATA
GTGAAGGTGAACGTTTTATGGAACGATATGCTCCAACTGCCAAGGATCTTGCATCAAGAGATGTTGTCTC
CAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGGCCGCATAAGGATCATATCTTTCTCCAT
TTGAATCATCTTCCACCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTG
CTGGTGTTGACGTTACCAAAGAGCCAATTCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTAGTGA
CCATAAAGGACATGATCCAGATGCAGTGGTTCCTGGGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCT
GTTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGATATTGTTGTGTTCGGCCGTGCTTGTGCAA
ATAGGGTTGCAGAGATAAGCAAACCAGGTGAGAAACAGAGACCTCTAGAGGAGAATGCAGGTAAGAAGAC
AATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGGTTGAACATG
CAGAGGATTATGCAGAACAATGCAGCTGTGTTCCGCACCCAAGAAACACTGGAAGAAGGTTGTCAGTTGA
TCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCGGAGTTTGATATGGAACTCTGATCT
GATAGAGACAATAGAGTTGGAGAACCTTCTGATAAACGCATCCGTAACAATGCATTCAGCGGAAGCACGA
AAGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGGATGGAGAATGGATGAAGCATA
CATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGTTCACATGGACACTCTCGACGA
TGAGATTGAGACTTTCCCTCCCAAAGCTCGCGTCTATTGA
Upstream Sequence
ATGTGGCGCTGCGTCTCTCGTAGCCTTCGAGCTCCTTCTTCATCAAGGACCTCACTCTCTGGATCTCGCT
TTTCTAGATTCTTCTCCTCCTCTTCTCAGACGGGTGATTACACGATAGTGGATCACACCTATGACGCGGT
GGTTGTTGGAGCTGGTGGTGCTGGTCTCAGAGCGGCCATTGGATTATCTGAGCATGGCTTTAACACCGCT
TGCATTACCAAGCTTTTCCCCACACGCTCCCACACCGTCGCTGCTCAGGGTGGTATAAACGCTGCACTGG
GAAACATGTCTGAAGATGACTGGAGATGGCACATGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTGA
TCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCAAAAGCTGTGATTGAACTTGAGAACTACGGCCTT
CCCTTTTCTCGTACTGAAGAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCA
AAGGTGGTCAGGCCTATCGTTGTGCTTGCGCTGCGGATCGAACTGGACATGCTCTCTTGCATACCTTATA
TGGACAAGCTATGAAGCATAACACACAGTTCTTTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGT
GATGGTACTTGCCAGGGTGTAATTGCACTAAACATGGAAGACGGAACACTGCATCGTTTCCGCTCCGCAC
AAACAATTTTGGCCACTGGGGGTTATGGCAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGG
AGATGGCAATGCCATGGTTGCACGTGCCGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAGTTCCACCCA
ACTGGTATATATGGAGCCGGATGTCTCATCACTGAAGGATCTCGAGGTGAAGGTGGGATCCTTAGAAATA
GTGAAGGTGAACGTTTTATGGAACGATATGCTCCAACTGCCAAGGATCTTGCATCAAGAGATGTTGTCTC
CAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGGCCGCATAAGGATCATATCTTTCTCCAT
TTGAATCATCTTCCACCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTG
CTGGTGTTGACGTTACCAAAGAGCCAATTCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTAGTGA
CCATAAAGGACATGATCCAGATGCAGTGGTTCCTGGGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCT
GTTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGATATTGTTGTGTTCGGCCGTGCTTGTGCAA
ATAGGGTTGCAGAGATAAGCAAACCAGGTGAGAAACAGAGACCTCTAGAGGAGAATGCAGGTAAGAAGAC
AATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGGTTGAACATG
CAGAGGATTATGCAGAACAATGCAGCTGTGTTCCGCACCCAAGAAACACTGGAAGAAGGTTGTCAGTTGA
TCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCGGAGTTTGATATGGAACTCTGATCT
GATAGAGACAATAGAGTTGGAGAACCTTCTGATAAACGCATCCGTAACAATGCATTCAGCGGAAGCACGA
AAGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGGATGGAGAATGGATGAAGCATA
CATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGTTCACATGGACACTCTCGACGA
TGAGATTGAGACTTTCCCTCCCAAAGCTCGCGTCTATTGA
Downstream Sequence
TGTAAGATCTCTCACTTCCTTCTCCTTAGTTTTCCGTTCCGATCGTAGTAAACACGCGTT
TGGATGTTGATCGAGTCCCGTTTCGTAATTGCTTGTGTGCTTATTTTATATCCATGTCCG
TATGCAGCAGACGGGTGATTACACGATAGTGGATCACACCTATGACGCGGTGGTTGTTGG
AGCTGGTGGTGCTGGTCTCAGAGCGGCCATTGGATTATCTGAGCATGGCTTTAACACCGC
TTGCATTACCAAGCTTTTCCCCACACGCTCCCACACCGTCGCTGCTCAGGTATATTTTGG
TTACAATTCGATTATAAAATGGATGTTTTGGTTTCTTTTAGATTTGATCTTTATGTGATG
TGAAGGGTGGTATAAACGCTGCACTGGGAAACATGTCTGAAGATGACTGGAGATGGCACA
TGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTAATTCTTCTCCTCCTTGCCTTTTGT
ATTAGTTAATTGATCTTGCTAGTTTTGGCTATTATCTTACTTTAATTGATCTTGAGTTTC
ATTTCTTTTCTTTCTTTCCTTGTGTAGGTGATCAAGATGCTATCCAGTATATGTGTAGAG
AGGCACCAAAAGCTGTGATTGAACTTGAGAACTACGGCCTTCCCTTTTCTCGTACTGAAG
AGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCAAAGGTGACT
TTGTCTACACTCTTATTGACCTTCTTTTGGGAGCTTCGACTTATTTCTCATATTGGCTTT
CTTTTTTTATTCTATCATCAGGTGGTCAGGCCTATCGTTGTGCTTGCGCTGCGGATCGAA
CTGGACATGCTCTCTTGCATACCTTATATGGACAAGCTATGAAGCATAACACACAGTTCT
TTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGTGATGGTATGTATATGGGATATC
TTTTCCTTTTCTTTTGTAGCTTCTGTTAGTATTTATGCAACATTGTTATCCGACCTGCAG
GTACTTGCCAGGGTGTAATTGCACTAAACATGGAAGACGGAACACTGCATCGTTTCCGCT
CCGCACAAACAATTTTGGCCACTGGGGTGAGATAGTTTTGACTTTTGAGTAGCTTTATAT
GATGCGAATTTTTCTGACTAGTGCAAATATACTTTAACATGATGGCTCATGTTTCTCCAG
GGTTATGGCAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGGAGATGGCAAT
GCCATGGTTGCACGTGTCGGTCTTCCACTCCAGGTTTGCCACCTGTTTCGTTTTGAGATA
AATGGTGAATGATGTCTTTTGTGCGCTGATAATGTTATTGTCTAACGACTTTATGCAGGA
CTTGGAGTTTGTTCAGTTCCACCCAACTGGTATATATGGAGCCGGATGTCTCATCACTGA
AGGTTGTCGTCTTCTCCTCACATGCACGAATCTGCTTGCAAGATAAATATCTAATGTGTG
TTCCCGACATTTACATTGTCTATTATACAATTGCAGGATCTCGAGGTGAAGGTGGGATCC
TTAGAAATAGTGAAGGTGAACGTTTTATGGAACGATATGCTCCAACTGCCAAGGATCTTG
CATCAAGAGATGTTGTCTCCAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAG
GTATGCTTTCCTTAGAACTAGTTTTAGTTTTTTGGAGAAACTCCCATTGATTGTCTTTGA
GCTGTATCCATGATTAATTTTGTGATACGTCTAGTTTTTAATTCTCGTTTTGGATCTGTT
GCTAATATTGCCAGGGCGCATAAGGATCATATCTTTCTCCATTTGAATCATCTTCCACCA
GAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTGCTGGTGTT
GACGTTACCAAAGAGCCAATTCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTATT
CCAACAAATTACCACGGCGA
Pro Sequence
MWRCVSRSLRAPSSSRTSLSGSRFSRFFSSSSQTGDYTIVDHTYDAVVVG
AGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDD
WRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKI
YQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVE
YFALDLLMASDGTCQGVIALNMEDGTLHRFRSAQTILATGGYGRAYFSAT
SAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGI
LRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIFLH
LNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGSDHKG
HDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIS
KPGEKQRPLEENAGKKTIEWLNKLRHSSGSLPTSSIRLNMQRIMQNNAAV
FRTQETLEEGCQLIDKAWESFEDVQVKDRSLIWNSDLIETIELENLLINA
SVTMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDEKVRLEYRPV
HMDTLDDEIETFPPKARVY
mRNA Sequence
ATGTGGCGCTGCGTCTCTCGTAGCCTTCGAGCTCCTTCTTCATCAAGGACCTCACTCTCTGGATCTCGCT
TTTCTAGATTCTTCTCCTCCTCTTCTCAGACGGGTGATTACACGATAGTGGATCACACCTATGACGCGGT
GGTTGTTGGAGCTGGTGGTGCTGGTCTCAGAGCGGCCATTGGATTATCTGAGCATGGCTTTAACACCGCT
TGCATTACCAAGCTTTTCCCCACACGCTCCCACACCGTCGCTGCTCAGGGTGGTATAAACGCTGCACTGG
GAAACATGTCTGAAGATGACTGGAGATGGCACATGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTGA
TCAAGATGCTATCCAGTATATGTGTAGAGAGGCACCAAAAGCTGTGATTGAACTTGAGAACTACGGCCTT
CCCTTTTCTCGTACTGAAGAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCA
AAGGTGGTCAGGCCTATCGTTGTGCTTGCGCTGCGGATCGAACTGGACATGCTCTCTTGCATACCTTATA
TGGACAAGCTATGAAGCATAACACACAGTTCTTTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGT
GATGGTACTTGCCAGGGTGTAATTGCACTAAACATGGAAGACGGAACACTGCATCGTTTCCGCTCCGCAC
AAACAATTTTGGCCACTGGGGGTTATGGCAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGG
AGATGGCAATGCCATGGTTGCACGTGCCGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAGTTCCACCCA
ACTGGTATATATGGAGCCGGATGTCTCATCACTGAAGGATCTCGAGGTGAAGGTGGGATCCTTAGAAATA
GTGAAGGTGAACGTTTTATGGAACGATATGCTCCAACTGCCAAGGATCTTGCATCAAGAGATGTTGTCTC
CAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGGCCGCATAAGGATCATATCTTTCTCCAT
TTGAATCATCTTCCACCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTG
CTGGTGTTGACGTTACCAAAGAGCCAATTCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTAGTGA
CCATAAAGGACATGATCCAGATGCAGTGGTTCCTGGGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCT
GTTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGATATTGTTGTGTTCGGCCGTGCTTGTGCAA
ATAGGGTTGCAGAGATAAGCAAACCAGGTGAGAAACAGAGACCTCTAGAGGAGAATGCAGGTAAGAAGAC
AATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGGTTGAACATG
CAGAGGATTATGCAGAACAATGCAGCTGTGTTCCGCACCCAAGAAACACTGGAAGAAGGTTGTCAGTTGA
TCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCGGAGTTTGATATGGAACTCTGATCT
GATAGAGACAATAGAGTTGGAGAACCTTCTGATAAACGCATCCGTAACAATGCATTCAGCGGAAGCACGA
AAGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGGATGGAGAATGGATGAAGCATA
CATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGTTCACATGGACACTCTCGACGA
TGAGATTGAGACTTTCCCTCCCAAAGCTCGCGTCTATTGA