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Detail for ZS11_C09G40620.t1

Genome:
ZS11: ZS11_C09G40620.t1
ZS11_v0: Bnascaffold2794T0000200ZS
WE: WE_C09G42730.t1
WE_v0: Bnascaffold826T0000600WE
Darmor: C09p40500.1_BnaDAR
BH: BnaC09T203400BH
Quinta: Not available
ZS2: BnaC09T322400ZS2
SW: BnaA06T234100SW
Express61: C09p042030.1_BnaEXP
Xiaoyun: BnaC02G0383700XY
P202: Not available
BL: BnaC09T203400BH
TA: BnaC02T384900TA
Da-Ae: Not available
RB: BnaA06T221400RB
No2127: BnaC09T0281000NO
P130: Not available
Length: 81
KOG ID: KOG4662
KOG E-value: 1.200000e-45
KOG Score: 143.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0008137(NADH dehydrogenase (ubiquinone) activity)
KEGG Ortholog: -
NR Protein: SFV92945.1
NR E-value: 3.700000e-33
NR Score: 145.6
NR Annotation: SFV92945.1 NADH dehydrogenase subunit 3 (chloroplast) [Cochlearia excelsa]
SwissProt Protein: A4QJT8|NU3C_OLIPU
SwissProt E-value: 1.610000e-45
SwissProt Score: 144.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Olimarabidopsis pumila OX=74718 GN=ndhC PE=3 SV=1
CDS Sequence (249 bp)
ATGTTTCTGCTTTACGAATATGATATTTTCTGGGCATTTTTAATAATATCAAGTGCTATTCCTGTTTTGG
CATTTCTACTTTTCGGTTATGAATCAGGTATTGAACCGATCGGTGATGCTTGGTTACAATTTAGAATCCG
TTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACCGTTTTTCTGTATCCGTGGGCAATG
AGTTTCGATGTACTAGGGGTATCCGCTTTTATATAA
Upstream Sequence
ATGTTTCTGCTTTACGAATATGATATTTTCTGGGCATTTTTAATAATATCAAGTGCTATTCCTGTTTTGG
CATTTCTACTTTTCGGTTATGAATCAGGTATTGAACCGATCGGTGATGCTTGGTTACAATTTAGAATCCG
TTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACCGTTTTTCTGTATCCGTGGGCAATG
AGTTTCGATGTACTAGGGGTATCCGCTTTTATATAA
Downstream Sequence
GGTCTTATCTCCAATTACGAAGGGGCCGGATGAACTTTCTAGTTATGAATCAGGTATTGA
ACCGATCGGTGATGCTTGGTTACAATTTAGAATCCGTTATTATATGTTTGCTCTAGTTTT
TGTTGTTTTTGATGTTGAAACCGTTTTTCTGTATCCGTGGGCAATGAGTTTCGATGTACT
AGGGGTATCCGCTTTTATATAAGCTTTCATTTTCGTGCTTATCCTAATTCTTGGTTTAGT
TTATGCATGGCGAAAAGGAGCGTTGGAATGGTCTTAGTTCGTTTCCTGAATACTTGTACA
ATAACAATAAAAAAAGTAAAAAAAAACCATTGAAACAATTATGAATTCCATTAAGTTTCC
AGTACATGATCGAACAACAAAAAACTCAGTTATTTCAACTACGTTAAATGATCTTTAAAA
AAAGACAAGACTTTCCAGCCTATGGCGCTTCTTTATGGTACCAGTTGTTGTTTTATTGAA
TTTTCCTCATTAATAGGCTCGATTTGACTTTGATCGTTATGGGCTAGTACCAAGATCAAG
TCCTAGACAGGCGGACCTTATTTTAACAGCAGGTACAGTAACAATGAAAATGGCTCCTTC
TTTAGTGAGATTATATGAACAAATGCCTGAACCAAAGTATGTTATTGCTATGGGAGCGTG
TACAATTACAGGGGATGTTCAGTACCGATTCTTATAGTACTGTTCGAGGGGTTGATAAGC
TAATTCCTGTAGATGTCTATTTGCCGGGTTGTCCACCTAAACCAGAGGCTGTTATAGACG
CTATAACAAAGCTTCGTAAGAAAATAGCTAGAGAAATCTATAAGGATCGAATTAGACCTC
AATGGGGTAATCGGTGTTTTACTACCAATCACAAGTTTTTTGTTGTACGCAGTACACAGA
CTGGAAATTATGATCAAGAATTACTCTATCCACCATCATCTACTTCAGAGATCTCTACTG
AAACATTTTTAAATACAAAAGCCCAGCTTCTTCCCACGAATTAGTTAATTAGGAGGATTT
GAGAGAATAAGAAAAAATCTTCATAAATTAGAACTCATGGTAAATGTGAAATACTTAAAT
TTATATAAAAAGGTGTGGGGAAATAAAAAAGATGCAGGGCACTTTGTCCGTTTGGCTAGC
CAAACGCGGGCTGGTTCATTGATCGTTGGGCTTCGATTACCAAGGAATAGAGACTTTACA
AATAAAGCCTGAAGATTGGCATTCTATTGCTGTAATTTTATATGTATATGGTTACAATTA
TTTACGTTCCCAATGTGCCTATGATGTGGCACCAGGTGGCCTCTTAGCCAGTGTGTATCA
TCTTACGAGAATAGAATATAGTGTCAATCAAGCGGAAGAAGTTTGCATAAAAGTATTTAC
TCACAGGAGTAATCCCAGAATTCCATCTGTTTTCGGGTTTGAAAAGTACGGATTTTGCAG
AACGGGAATCTTATGATATGTTAGGAATCACTTATGATAGCCATCCGCGGCTGAAACGGA
TCTTAATGCCCGAAAGTTGGATAGGGTGGCCTTTACGTAAGGATTATATTGCCCCAATTT
TTATGAAATACAAGATGCTTATTGAATGATAAAAATTTGAATGATAAAAATGAGTCTTAT
TTTCTACAACTACGGACCTTCGTAGAATATTTTGAATTCGAGTCATTTTTAGATCAAACA
AACAGAAGAATTAAGGTCTTATTCATATTATTATAGATAGCTTAATCTCCAATTTGAAAG
ATACTTTTTTCCTAAAAGCCGAGCCAATAGGATGAACTAAAAAAAAAAAGAGTTCTGCAT
TATGAACTTTGTATCGCGCACATAACTTAGTAAACTTTAGTCACATAACTGGGAATGAAT
AAATAAGATCGGAAAGCAATACAATAAATGGGGGGGGTAAAATTCTATTTCTATTGTATC
TAATCTAATGAATCTTGGGGGTATTTCTGCCCTTCAACGATAGATACTATAGATAGATAT
AGATCTTTTTTTTTTACTTT
Pro Sequence
MFLLYEYDIFWAFLIISSAIPVLAFLLFGYESGIEPIGDAWLQFRIRYYM
FALVFVVFDVETVFLYPWAMSFDVLGVSAFI
mRNA Sequence
ATGTTTCTGCTTTACGAATATGATATTTTCTGGGCATTTTTAATAATATCAAGTGCTATTCCTGTTTTGG
CATTTCTACTTTTCGGTTATGAATCAGGTATTGAACCGATCGGTGATGCTTGGTTACAATTTAGAATCCG
TTATTATATGTTTGCTCTAGTTTTTGTTGTTTTTGATGTTGAAACCGTTTTTCTGTATCCGTGGGCAATG
AGTTTCGATGTACTAGGGGTATCCGCTTTTATATAA