SEARCH

DETAIL

Detail for ZS11_C09G58550.t1

Genome:
ZS11: ZS11_C09G58550.t1
ZS11_v0: BnaC09T0476600ZS
WE: WE_C03G05790.t1
WE_v0: Bnascaffold2551T0000300WE
Darmor: A02p05100.1_BnaDAR
BH: BnaC09T361700BH
Quinta: BnaC09T0443500QU
ZS2: BnaC09T464200ZS2
SW: BnaC09T496500SW
Express61: C09p037620.1_BnaEXP
Xiaoyun: BnaC09G0496200XY
P202: BnaC03G010330P202.1
BL: BnaC09T361700BH
TA: BnaC03T092000TA
Da-Ae: Not available
RB: BnaA03T082300RB
No2127: BnaC09T0417000NO
P130: BnaC09G060400P130.1
Length: 106
KOG ID: KOG3458
KOG E-value: 1.830000e-75
KOG Score: 219.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0006120(mitochondrial electron transport, NADH to ubiquinone)
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03952 NDUFA8; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
NR Protein: XP_013667473.1
NR E-value: 9.600000e-58
NR Score: 227.6
NR Annotation: XP_013667473.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Brassica napus]
SwissProt Protein: Q8LGE7|NDA8B_ARATH
SwissProt E-value: 7.750000e-75
SwissProt Score: 219.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis thaliana OX=3702 GN=At5g18800 PE=1 SV=1
CDS Sequence (325 bp)
ATGTCGAGTGCGGTGGACGCAACTGGGAACCCGATCCCTACATCCGCGGTGTTGACTGCGTCGGCGAAGC
ATATAGGTTTAAGATGTATGCCTGAGAACGTTGCCTTCCTCAAGTGCAAAAAGAACGATCCCAACCCCGA
GAAATGTCTCGACAAGGGCCGTGACGTCACTCGCTGTGTCATTGGCTTGCTGAAGGATCTTCACCAGAAG
TGCCAAAGGGAGATGGATGACTATGTTGGGTGTATGTATTACTACACCAACGAGTTTGATCTCTGCAGGA
AAGAGCAAGAAGCCTTCGAGAAAGTGTGCCCCCTGAAATGA
Upstream Sequence
GAAGAAAGACCCAAACCGATCCGTTTGAGAAGATTGGATTGATTTTGTTATCTCCCTTTTACGGATTTGG
AAATATCTGAGCTATGTCGAGTGCGGTGGACGCAACTGGGAACCCGATCCCTACATCCGCGGTGTTGACT
GCGTCGGCGAAGCATATAGGTTTAAGATGTATGCCTGAGAACGTTGCCTTCCTCAAGTGCAAAAAGAACG
ATCCCAACCCCGAGAAATGTCTCGACAAGGGCCGTGACGTCACTCGCTGTGTCATTGGCTTGCTGAAGGA
TCTTCACCAGAAGTGCCAAAGGGAGATGGATGACTATGTTGGGTGTATGTATTACTACACCAACGAGTTT
GATCTCTGCAGGAAAGAGCAAGAAGCCTTCGAGAAAGTGTGCCCCCTGAAATGAATGATTAAATCTGTGA
TCTCTTAATAAAGCGACAAGCTTTACTCTCTTCTCTTTGTTGTTTTCATCAAAGCAATTTTACTCTCAAA
ACACTTTTGTTATCAAAGACAACCAAATGACTCAGTTTTCATTGTTCGATGGTTCTTTAGTGAGCACAGG
ATGGATATTCCGGATGAACAATCTGTTTTATGAGCTTAATCTGTTACCATACTCGGGCAGTTGACACTAG
TCTTTATAAGTTTCATCATTCAGC
Downstream Sequence
TGTACGTTTCTTTAAAACCTCTTTTAGTTGAGCGATGACATGATATGATTAACTACAGTT
AGTTTTGATGCTTAGAAGTTTGTTTACTCTTATAACAATGATACAATGCCTATTATTATA
TCAATCATGCTGTGTTTCGTTACATCAATCTGCGTCAGCTAGAACGTAGATTAATGATGT
TGATTCCACATTGCGACGTTATGTGGCATTCCTGGGTAAAGAATTAGTTTTTTTTTTCGG
TTGCTGCAGGCTGAAGGATCTTCACCAGAAGTGCCAAAGGGAGATGGATGACTATGTTGG
GTGTATGTATTACTACACCAACGAGTTTGATCTCTGCAGGAAAGAGCAAGAAGCCTTCGA
GAAAGTGTGCCCCCTGAAATGAATGATTAAATCTGTGATCTCTTAATAAAGCGACAAGCT
TTACTCTCTTCTCTTTGTTGTTTTCATCAAAGCAATTTTACTCTCAAAACACTTTTGTTA
TCAAAGACAACCAAATGACTCAGTTTTCATTGTTCGATGGTTCTTTAGTGAGCACAGGAT
GGATATTCCGGATGAACAATCTGTTTTATGAGCTTAATCTGTTACCATACTCGGGCAGTT
GACACTAGTCTTTATAAGTTTCATCATTCAGCGTAATACAGACTTCATCGAACAATTTGA
TTGGGATCTGTTTCTCTGGTTAATCGAACAATTTGATTGGCATCTGTTTCTCTGGTTAGG
CTTGTGGAAGCACTTCTCTTAGTCTTATACTCTTATATAATTAAGACAAAATAAGCACAG
AGATGATACACACATCCATAGCAAAACTTGAGAATCTTTTCTCCCACTCCACTTGAATCG
CAAGATCAGCTACTGCAAGGAAACACCACACCAAACCACACTTTACTAGATATAAATCTT
GAACCAGAGACAATAACAATGCTAGCTATCTATTTACCTGATGGACCGAGAACGTGACCT
GTGCCCGAGTCAAAAAGGAAATAAACACTCTTACACAGTGAGACAATTAACCTTTTTCCA
ATGATATTTTGAATGTTAACATGCTACTAGTGTTCTTAGATGGTTTTTGTGGCCAGTGAC
GCTTCTTAAGCTTCATTGCCTTAGCTGCATCTTCAGCATAACGGTACTTAACAAATTCAA
ACCCTCTCGGCTCTCTAAACCACTAAATCATCATCAAAATCGCAGTTAAAAGGTGGGTGT
CTGCTCAAATCACATTGACTTGCGCAACACCACAAGTTCCCAATAAAAAAAAAAACTATC
TCTATCTGGCTTTGTTCTACATAAGTCAAAGCTATGAACCTGAGCAATTCAATTCTCAAT
ATCCGTCACTCGGAGCTAATCTGAGTACAAGATACAAAGTTTCACGCATACCTAGTATAA
TAATAATTCCAAGGCAGGTACATGTCCTTGAGTGAACCAAACCGCTCAAAACAAAACCAG
CAACAGCCAATATGTTATGCCAAAAAGAACCGTAATTGTAAAACAGTTCTGAGATCACAC
ATCTCTCTCTCTCTCGAGAGAGAGAGAGAGGGAGACCATAACTCTAAACAGCAGCAGTAC
GAGTAATATTTTGGAGGGAGAGATGAAGAAATTGACGACCATACGAGAGTTTTCAAAAGA
ACACTTGCCGGAAGCCGATCAGGCTTTGTATGGGTCGATATCCTATGTGGGCTTAAAGAT
GTACGATCTTAAGCCCAATTAACCATACTAATTTACGAAAGAGTGTGCGAATGCAGCGAC
TGAAATAAAACCATCCTACTAGAACGCGCAACCGCGAAATCTTTTTCAATTATTTTTATA
TAAACATTTTGTTTTCAATTCTAAATTGGTATATCTATATATATATAAAGATGTTGGTGA
CCTTCTTGTGATGCCACGTGGAAAGTCGTGCATCCTAGAAGCGACACCTATCCCCTTTCA
TAAAAACGATGCGTTTCATTTATTTTTGTTTGTTTTCCGTCTGGTTTTCATTTTTTCTGT
TGTCATTATTTTAGTTTATA
Pro Sequence
MSSAVDATGNPIPTSAVLTASAKHIGLRCMPENVAFLKCKKNDPNPEKCL
DKGRDVTRCVIGLLKDLHQKCQREMDDYVGCMYYYTNEFDLCRKEQEAFE
KVCPLK
mRNA Sequence
GAAGAAAGACCCAAACCGATCCGTTTGAGAAGATTGGATTGATTTTGTTATCTCCCTTTTACGGATTTGG
AAATATCTGAGCTATGTCGAGTGCGGTGGACGCAACTGGGAACCCGATCCCTACATCCGCGGTGTTGACT
GCGTCGGCGAAGCATATAGGTTTAAGATGTATGCCTGAGAACGTTGCCTTCCTCAAGTGCAAAAAGAACG
ATCCCAACCCCGAGAAATGTCTCGACAAGGGCCGTGACGTCACTCGCTGTGTCATTGGCTTGCTGAAGGA
TCTTCACCAGAAGTGCCAAAGGGAGATGGATGACTATGTTGGGTGTATGTATTACTACACCAACGAGTTT
GATCTCTGCAGGAAAGAGCAAGAAGCCTTCGAGAAAGTGTGCCCCCTGAAATGAATGATTAAATCTGTGA
TCTCTTAATAAAGCGACAAGCTTTACTCTCTTCTCTTTGTTGTTTTCATCAAAGCAATTTTACTCTCAAA
ACACTTTTGTTATCAAAGACAACCAAATGACTCAGTTTTCATTGTTCGATGGTTCTTTAGTGAGCACAGG
ATGGATATTCCGGATGAACAATCTGTTTTATGAGCTTAATCTGTTACCATACTCGGGCAGTTGACACTAG
TCTTTATAAGTTTCATCATTCAGC