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Detail for ZS11_C09G68300.t1

Genome:
ZS11: ZS11_C09G68300.t1
ZS11_v0: BnaC09T0561500ZS
WE: WE_C09G70970.t1
WE_v0: BnaC09T0534000WE
Darmor: C09p67860.1_BnaDAR
BH: BnaC09T450000BH
Quinta: BnaC09T0524400QU
ZS2: BnaC09T550100ZS2
SW: BnaA10T270000SW
Express61: C09p051980.1_BnaEXP
Xiaoyun: BnaC09G0582300XY
P202: BnaA10G020570P202.1
BL: BnaC09T450000BH
TA: BnaA10T251900TA
Da-Ae: Not available
RB: BnaC09T444100RB
No2127: BnaA10T0190900NO
P130: BnaC09G068580P130.1
Length: 213
KOG ID: KOG0449
KOG E-value: 2.660000e-57
KOG Score: 177.0
KOG Annotation: Carbohydrate transport and metabolism
Biological Process: GO:0006099(tricarboxylic acid cycle)
Cellular Component: GO:0016020(membrane),GO:0045281(succinate dehydrogenase complex)
Molecular Function: GO:0016627(oxidoreductase activity, acting on the CH-CH group of donors),GO:0000104(succinate dehydrogenase activity),GO:0009055(electron transfer activity)
KEGG Ortholog: K00236 SDHC, SDH3; succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
NR Protein: XP_013737489.1
NR E-value: 8.800000e-111
NR Score: 404.8
NR Annotation: XP_013737489.1 succinate dehydrogenase subunit 3-1, mitochondrial-like isoform X1 [Brassica napus]
SwissProt Protein: P0DKI1|SDH32_ARATH
SwissProt E-value: 2.900000e-105
SwissProt Score: 305.0
SwissProt Annotation: Succinate dehydrogenase subunit 3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH3-2 PE=1 SV=1
CDS Sequence (651 bp)
ATGGCTGCCACAGCTATTCTCCGATCGATCCGCCGACGCGACGTCGTCTCTGCGCCTCTTTCCGTCTACA
AATCTCTTGCTGGTAATGCTCAAACTTCATTGGGTTCGTACACTGGTCAGACCTATGCAAGTTTGTGTAG
AGCTTTCGGATCGAGAGCCGGTGTGAATGAAAATGTTGGGACTGGTTTTGGAACTAGCAACATAAGCAAT
GCCGTTAGAGAGGAGAGAGAGCATTCAAAAGCTACTGTGAATGCTATGGGAGCTCATCTGAGAGCTCTTG
GTGTGGGAACACCAAGACGTGTGTTGTCTACAATCGCCGAGGGTATCAAGATGACAGAGGAGGACCAGAC
TTCTCCAAAACCCCAAAGCTTTCGCCCTCTATCTCCTCACCTCACGGTTTACCAGCCTCAGAAGAACTCA
ATGTTATCCATTTTCAACAGAATCTCGGGGATTTACTTGACCGGAGTCTTTTATGGCGGCTATCTTCTCT
ACCTGAAGATGGGTATGATCTGCCTCACTTACCCGGCTTTCTACCAAGTTCATTACCATGTACAGCAGCA
ACTTCCGGTTATCACCTCGGTTACTGCATTGGCCGCGCTTTACCATACTATCAAGAGTATTCACTCGCTC
TTGACCCATTGA
Upstream Sequence
TTTTAATCGAGATCCCATTTCCCTTGTTCGAGTTTTCTCAGGAAAGCTAGTAGAGAGAGATACTGGTTTT
GATTCATACGATGGCTGCCACAGCTATTCTCCGATCGATCCGCCGACGCGACGTCGTCTCTGCGCCTCTT
TCCGTCTACAAATCTCTTGCTGGTAATGCTCAAACTTCATTGGGTTCGTACACTGGTCAGACCTATGCAA
GTTTGTGTAGAGCTTTCGGATCGAGAGCCGGTGTGAATGAAAATGTTGGGACTGGTTTTGGAACTAGCAA
CATAAGCAATGCCGTTAGAGAGGAGAGAGAGCATTCAAAAGCTACTGTGAATGCTATGGGAGCTCATCTG
AGAGCTCTTGGTGTGGGAACACCAAGACGTGTGTTGTCTACAATCGCCGAGGGTATCAAGATGACAGAGG
AGGACCAGACTTCTCCAAAACCCCAAAGCTTTCGCCCTCTATCTCCTCACCTCACGGTTTACCAGCCTCA
GAAGAACTCAATGTTATCCATTTTCAACAGAATCTCGGGGATTTACTTGACCGGAGTCTTTTATGGCGGC
TATCTTCTCTACCTGAAGATGGGTATGATCTGCCTCACTTACCCGGCTTTCTACCAAGTTCATTACCATG
TACAGCAGCAACTTCCGGTTATCACCTCGGTTACTGCATTGGCCGCGCTTTACCATACTATCAAGAGTAT
TCACTCGCTCTTGACCCATTGAAGCAACATTTCCCCTAAGCTCTTTTCGTTGTTTGGTTAAGCCACCAGA
GTCTCCAGTAAGAGTTTCCTTGAGATGCACAAGATTTAATAAAAGAGAGTTAGAAACGTTTGTTAAACTC
TCATTGTCTTTTGAGAAAGCAAGTGTCTAGCTTTTGTTTTGGGATTTTAGGCTTTGAAAACTTATGTTTG
TTGGCTTTTTCTTTGTTCTAAGACCTTATTGATGGGGTTGGAATGTAATAAAATGTTTACCAGTTCTAAG
ACCGCGCTTGAGGGAGATGCAGGTTGGGCATGGGAATAATACTTTGAGTGATTGAAGAAGAAACTGAAAA
TTGG
Downstream Sequence
TGTACGGCTTTTTGGTTAAATAGCTGATAGATCGAGAAAATTTGCGATTCGTGGAATTAT
TCATGGAATATGAAACCGATATGCTGATTTGCAGATTTTGATGTATTGATCGTTGATTTA
GAAAGAAATTGAAAACACGAGATTATCTATTAGGGTACAGATTTGTATAGCCTTTTGTGG
AATAGAGATGAAATTTTCTCAGAATAATCTGAAGACTGTTAGCAAAGAAGAAGATGATAG
AGACTTAGCTACCGTATGAGCTTTAATTTTTTTATTTTGAGGCGCTTAATGAGAATCAGA
TGATGGGGTCTTCTTTTCCATGTTGGATATGGGTAGAGACGTTTTTCTTAACTGTTCTTT
GATAAACGTTCTTCTTTGCAGCTTGCTGGTAATGCTCAAACTTCATTGGGTTCGTACACT
GGTCAGACCTATGCAAGTTTGTGTAGAGCTTTCGGGTATGTTTCCTTTTGCAAAAAAAAA
AAACGTATGGAGTCACCCTGTTGTTGCGCTTTTGACTGTGTCTTTTTCGTTATAGATCGA
GAGCCGGTGTGAATGAAAATGTTGGGACTGGTTTTGGAACTAGCAACATAAGCAATGCCG
TTAGAGAGGAGAGAGAGGTAAGATGTCTTTGTCCAAACTTTGGGATTCTTTTTTATTTCC
TTTGTAATGTTTAAAAGCAGCTTAAACTTATGATTGTCCTTGGTTGATCCTTATCTCGAT
TCTTCCCATAGCATTCAAAAGCTACTGTGAATGCTATGGGAGCTCATCTGAGAGCTCTTG
GTGTGGGAACACCAAGACGTGTGTTGTCTACAATCGCCGAGGGTATCAAGATGACAGAGG
AGGACCAGACTTCTCCAAAACCCCAAAGCTTTCGCCCTCTATCTCCTCACCTCACGGTTT
ACCAGCCTCAGAAGAACTCAATGTTATCCATTTTCAACAGAATCTCGGGGATTTACTTGA
CCGGAGTCTTTTATGGCGGCTATCTTCTCTACCTGAAGATGGGTATGATCTGCCTCACTT
ACCCGGCTTTCTACCAAGTTCATTACCATGTACAGCAGCAACTTCCGGTTATCACCTCGG
TTACTGCATTGGCCGCGCTTTACCATACTATCAAGAGTATTCACTCGCTCTTGACCCATT
GAAGCAACATTTCCCCTAAGCTCTTTTCGTTGTTTGGTTAAGCCACCAGAGTCTCCAGTA
AGAGTTTCCTTGAGATGCACAAGATTTAATAAAAGAGAGTTAGAAACGTTTGTTAAACTC
TCATTGTCTTTTGAGAAAGCAAGTGTCTAGCTTTTGTTTTGGGATTTTAGGCTTTGAAAA
CTTATGTTTGTTGGCTTTTTCTTTGTTCTAAGACCTTATTGATGGGGTTGGAATGTAATA
AAATGTTTACCAGTTCTAAGACCGCGCTTGAGGGAGATGCAGGTTGGGCATGGGAATAAT
ACTTTGAGTGATTGAAGAAGAAACTGAAAATTGGATTCTTGAGTTATTTTCTTGTTTCTT
AGGTTGGTTTTCTCATGTTTTGATCGTTGGCTATTTGATAAAATAACACAGAAGCATGGG
CCAGGATATTTTGGTTTTTGGGCTAAATATGGAAGGAGAAAAAGTAATAGGTAGCGCTGA
AAGGCTTAATCACGCACTATCGACCCTATGAAGTTTTTATTTATGCGGAAAAGCCCAATA
TTTATGGTCTGTCTTAGGGGTGGGCACTTTACCCTCCGAAGCCGCACTCGAACACAATCC
GAAAAACTCGAAACGAAATCCGAACCGAAGTAGCAAAATATCCGAACGAGTATTGAACTA
GGAGGGATTGGATATCCGAACCCGAACGGATAATATCTGAACCCGAATAGATATCCGAAG
ATAACCGAACATATGAATAATTAACCATATATTTCTAGTTTACATCTCTTATTTTATATA
AAATATTTATATTGATACTATACATACTTTAAGTTCATATGATATACATAAAATTACGGA
GAAAATGATTTGATACTCTC
Pro Sequence
MAATAILRSIRRRDVVSAPLSVYKSLAGNAQTSLGSYTGQTYASLCRAFG
SRAGVNENVGTGFGTSNISNAVREEREHSKATVNAMGAHLRALGVGTPRR
VLSTIAEGIKMTEEDQTSPKPQSFRPLSPHLTVYQPQKNSMLSIFNRISG
IYLTGVFYGGYLLYLKMGMICLTYPAFYQVHYHVQQQLPVITSVTALAAL
YHTIKSIHSLLTH
mRNA Sequence
TTTTAATCGAGATCCCATTTCCCTTGTTCGAGTTTTCTCAGGAAAGCTAGTAGAGAGAGATACTGGTTTT
GATTCATACGATGGCTGCCACAGCTATTCTCCGATCGATCCGCCGACGCGACGTCGTCTCTGCGCCTCTT
TCCGTCTACAAATCTCTTGCTGGTAATGCTCAAACTTCATTGGGTTCGTACACTGGTCAGACCTATGCAA
GTTTGTGTAGAGCTTTCGGATCGAGAGCCGGTGTGAATGAAAATGTTGGGACTGGTTTTGGAACTAGCAA
CATAAGCAATGCCGTTAGAGAGGAGAGAGAGCATTCAAAAGCTACTGTGAATGCTATGGGAGCTCATCTG
AGAGCTCTTGGTGTGGGAACACCAAGACGTGTGTTGTCTACAATCGCCGAGGGTATCAAGATGACAGAGG
AGGACCAGACTTCTCCAAAACCCCAAAGCTTTCGCCCTCTATCTCCTCACCTCACGGTTTACCAGCCTCA
GAAGAACTCAATGTTATCCATTTTCAACAGAATCTCGGGGATTTACTTGACCGGAGTCTTTTATGGCGGC
TATCTTCTCTACCTGAAGATGGGTATGATCTGCCTCACTTACCCGGCTTTCTACCAAGTTCATTACCATG
TACAGCAGCAACTTCCGGTTATCACCTCGGTTACTGCATTGGCCGCGCTTTACCATACTATCAAGAGTAT
TCACTCGCTCTTGACCCATTGAAGCAACATTTCCCCTAAGCTCTTTTCGTTGTTTGGTTAAGCCACCAGA
GTCTCCAGTAAGAGTTTCCTTGAGATGCACAAGATTTAATAAAAGAGAGTTAGAAACGTTTGTTAAACTC
TCATTGTCTTTTGAGAAAGCAAGTGTCTAGCTTTTGTTTTGGGATTTTAGGCTTTGAAAACTTATGTTTG
TTGGCTTTTTCTTTGTTCTAAGACCTTATTGATGGGGTTGGAATGTAATAAAATGTTTACCAGTTCTAAG
ACCGCGCTTGAGGGAGATGCAGGTTGGGCATGGGAATAATACTTTGAGTGATTGAAGAAGAAACTGAAAA
TTGG