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DETAIL

Detail for ZS11_C09G68820.t1

Genome:
ZS11: ZS11_C09G68820.t1
ZS11_v0: BnaC09T0566100ZS
WE: WE_A10G30160.t1
WE_v0: BnaA10T0247900WE
Darmor: A10p28200.1_BnaDAR
BH: BnaC09T454200BH
Quinta: BnaC09T0529400QU
ZS2: BnaC09T554500ZS2
SW: BnaA10T281700SW
Express61: C09p052400.1_BnaEXP
Xiaoyun: BnaA10G0257600XY
P202: BnaC09G110630P202.2
BL: BnaC09T454200BH
TA: BnaA10T256300TA
Da-Ae: Not available
RB: BnaC09T448300RB
No2127: BnaC09T0502000NO
P130: BnaC09G069030P130.1
Length: 486
KOG ID: KOG2658
KOG E-value: Not available
KOG Score: 991.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0051539(4 iron, 4 sulfur cluster binding),GO:0010181(FMN binding),GO:0051287(NAD binding)
KEGG Ortholog: K03942 NDUFV1; NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:7.1.1.2]
NR Protein: XP_009122464.1
NR E-value: 5.600000e-278
NR Score: 961.4
NR Annotation: XP_009122464.1 PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Brassica rapa]
SwissProt Protein: Q9FNN5|NDUV1_ARATH
SwissProt E-value: Not available
SwissProt Score: 991.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08530 PE=1 SV=1
CDS Sequence (1481 bp)
ATGGCACCTGTGAGGGGGATTCTTGGTTTGCAGAGGGCAGTATCTGTTTGGAAGGAGAGTAACAGACTTG
CTCCAGCTTTGAGATCATTCAGCACCCAAGCTGCGTCCACTTCCACCACTCCACAGCCACCTCCACCTCC
TCCGCCTCCGGAGAAGACTCATTTCGGTGGTCTCAAGGATGAAGATCGGATTTTTACCAACCTCTACGGT
CTGCACGACCCGTTTCTCAAGGGGGCGAAGAAGAGAGGTGATTGGTACAGGACCAAGGATTTGGTGCTCA
AGGGTACTGATTGGATTGTTAATGAGATGAAGAAGTCTGGTCTTCGTGGACGTGGCGGTGCTGGTTTCCC
TTCTGGTCTTAAGTGGTCCTTTATGCCTAAAGTCTCTGATGGGCGTCCTTCTTATTTGGTTGTCAACGCT
GATGAGAGTGAGCCTGGGACTTGTAAAGATAGGGAGATCATGCGTCATGACCCTCACAAGTTGTTGGAAG
GGTGTTTGATTGCTGGTGTTGGTATGAGAGCTAGTGCAGCTTATATTTACATCAGGGGTGAGTATGTGAA
TGAGCGTTTGAATCTAGAGAAGGCGAGGAGAGAGGCATATGCAGCTGGTCTCTTGGGGAAGAATGCATGT
GGTTCTGGGTATGACTTCGATGTTTACATCCATTTTGGAGCTGGTGCGTACATTTGTGGTGAAGAGACTG
CGCTTCTTGAAAGTCTCGAAGGGAAGCAAGGAAAGCCTAGGTTGAAGCCTCCGTTCCCTGCTAATGCTGG
TTTGTACGGTTGTCCCACAACTGTTACCAATGTGGAAACGGTGGCTGTTTCTCCTACCATTTTAAGGCGT
GGACCTGAGTGGTTTTCGAGTTTTGGTAGGAAGAATAACTCTGGGACGAAGCTGTTTTGTATATCGGGCC
ATGTTAACAAGCCATGTACCGTTGAAGAGGAGATGAGTATCCCTCTCAAGGAACTGATTGAGAGGCATTG
TGGAGGTGTCAGGGGTGGATGGGACAACCTGCTTGCTATCATTCCTGGAGGTTCCTCTGTCCCTTTGATT
CCTAAGAACATATGCGAGGATGTGCTGATGGATTTCGATGCGCTCAAGGCTGTCCAGTCAGGGCTAGGAA
CTGCAGCGGTCATTGTGATGGACAAATCGACCGATGTTGTGGATGCAATTGCGAGGCTCTCTTACTTCTA
CAAGCATGAAAGCTGTGGGCAGTGCACTCCGTGCAGAGAGGGAACAGGGTGGCTCTGGATGATCATGGAG
AGGATGAAAGTTGGCAATGCAAAGCTGGAGGAGATTGATATGCTTCACGAGGTAACCAAGCAGATCGAAG
GACACACAATCTGTGCATTGGGTGATGCAGCTGCATGGCCAGTGCAAGGTCTGATAAGGCACTTTAGGCC
GGAGCTTGAGAGAAGGATCAGGGAACGCGCTGAAAGGGAGTTGCTACAGGCTGCTGCTTAA
Upstream Sequence
CGTCGTTTTCAGGTGGGCATAAAGCTCAGTGCGTCCACGCTTCACCTTCTTCCTCCTCCTCCTCCTCTAC
ATCCCCCCTTCTCGATTATAGAGAACAAAGGCTAAGTCTCTCTCTCTCCCCGATTTCTTCGCGAAAATTT
CGTATCCATGGCACCTGTGAGGGGGATTCTTGGTTTGCAGAGGGCAGTATCTGTTTGGAAGGAGAGTAAC
AGACTTGCTCCAGCTTTGAGATCATTCAGCACCCAAGCTGCGTCCACTTCCACCACTCCACAGCCACCTC
CACCTCCTCCGCCTCCGGAGAAGACTCATTTCGGTGGTCTCAAGGATGAAGATCGGATTTTTACCAACCT
CTACGGTCTGCACGACCCGTTTCTCAAGGGGGCGAAGAAGAGAGGTGATTGGTACAGGACCAAGGATTTG
GTGCTCAAGGGTACTGATTGGATTGTTAATGAGATGAAGAAGTCTGGTCTTCGTGGACGTGGCGGTGCTG
GTTTCCCTTCTGGTCTTAAGTGGTCCTTTATGCCTAAAGTCTCTGATGGGCGTCCTTCTTATTTGGTTGT
CAACGCTGATGAGAGTGAGCCTGGGACTTGTAAAGATAGGGAGATCATGCGTCATGACCCTCACAAGTTG
TTGGAAGGGTGTTTGATTGCTGGTGTTGGTATGAGAGCTAGTGCAGCTTATATTTACATCAGGGGTGAGT
ATGTGAATGAGCGTTTGAATCTAGAGAAGGCGAGGAGAGAGGCATATGCAGCTGGTCTCTTGGGGAAGAA
TGCATGTGGTTCTGGGTATGACTTCGATGTTTACATCCATTTTGGAGCTGGTGCGTACATTTGTGGTGAA
GAGACTGCGCTTCTTGAAAGTCTCGAAGGGAAGCAAGGAAAGCCTAGGTTGAAGCCTCCGTTCCCTGCTA
ATGCTGGTTTGTACGGTTGTCCCACAACTGTTACCAATGTGGAAACGGTGGCTGTTTCTCCTACCATTTT
AAGGCGTGGACCTGAGTGGTTTTCGAGTTTTGGTAGGAAGAATAACTCTGGGACGAAGCTGTTTTGTATA
TCGGGCCATGTTAACAAGCCATGTACCGTTGAAGAGGAGATGAGTATCCCTCTCAAGGAACTGATTGAGA
GGCATTGTGGAGGTGTCAGGGGTGGATGGGACAACCTGCTTGCTATCATTCCTGGAGGTTCCTCTGTCCC
TTTGATTCCTAAGAACATATGCGAGGATGTGCTGATGGATTTCGATGCGCTCAAGGCTGTCCAGTCAGGG
CTAGGAACTGCAGCGGTCATTGTGATGGACAAATCGACCGATGTTGTGGATGCAATTGCGAGGCTCTCTT
ACTTCTACAAGCATGAAAGCTGTGGGCAGTGCACTCCGTGCAGAGAGGGAACAGGGTGGCTCTGGATGAT
CATGGAGAGGATGAAAGTTGGCAATGCAAAGCTGGAGGAGATTGATATGCTTCACGAGGTAACCAAGCAG
ATCGAAGGACACACAATCTGTGCATTGGGTGATGCAGCTGCATGGCCAGTGCAAGGTCTGATAAGGCACT
TTAGGCCGGAGCTTGAGAGAAGGATCAGGGAACGCGCTGAAAGGGAGTTGCTACAGGCTGCTGCTTAAAG
CCCTTGTTAACGACAGGGTATTTGCTATTATTTTCAACGGAAATAAAATCTGAAGCACATTATTAGGGTT
TTGGGGATGCAAAGCTACTTCAGAAGGAGAAGAAGGTACTGTATTTGTTGAAATGGTTCATGTTAAACTT
TAATCAAACTGTATCAGAAAGAGCTCTGTTTGCTCTTTTGCTTATTCTACTTTCTTTCAATGTTTGTTTG
TTTTCTCATGACTACTGAGAGCACATTTTGGGAACAACCAACCAAACAAAACCTTTTCATATTTAAAATA
AAGGATACTCCTTTTTTGGGTTTTTAGACCGTTCATT
Downstream Sequence
GTAAGCAATCAGTTTCTATCATCTTCCTTTTTCATTTTCTAGGTTTTGCATCTTTTATCT
CGATCGCAAATGATAGGGTTTTTGGAATCCAAGACTTGTTTTGTGTTGCATTTATTTCGA
ATTTTAGGTTAATGATTTCAAAATGCGACCTTTACTTTCGTATAGATCTAGTGGGTTTGT
GATTGTTTGGGATTTGATTTTGATCTGCTCGTTGTTCTTCGAGATTGGGTTGATTCACTT
CCTTTTGTAGGTTTTGGTTTGGTTTGATATTGAAATATAGATTTTTTTTTTATCAAAGTT
TAACTTTGAATTACATTTTATATGTAACCTCTATGTTCTCTATGCGTTCGATGACAGGCA
CCTGTGAGGGGGATTCTTGGTTTGCAGAGGGCAGTATCTGTTTGGAAGGAGAGTAACAGA
CTTGCTCCAGCTTTGAGATCATTCAGCACCCAAGCTGCGTCCACTTCCACCACTCCACAG
CCACCTCCACCTCCTCCGCCTCCGGAGAAGACTCATTTCGGTGGTCTCAAGGATGAAGAT
CGGATTTTTACCAACCTCTACGGTCTGCACGACCCGTTTCTCAAGGGGGCGAAGAAGAGA
GGTGATTGGTACAGGACCAAGGATTTGGTGCTCAAGGGTACTGATTGGATTGTTAATGAG
ATGAAGAAGTCTGGTCTTCGTGGACGTGGCGGTGCTGGTTTCCCTTCTGGTCTTAAGTGG
TCCTTTATGCCTAAAGTCTCTGATGGGCGTCCTTCTTATTTGGTTGTCAACGCTGATGAG
AGTGAGCCTGGGACTTGTAAAGATAGGGAGATCATGCGTCATGACCCTCACAAGTTGTTG
GAAGGGTGTTTGATTGCTGGTGTTGGTATGAGAGCTAGTGCAGCTTATATTTACATCAGG
GGTGAGTATGTGAATGAGCGTTTGAATCTAGAGAAGGCGAGGAGAGAGGCATATGCAGCT
GGTCTCTTGGGGAAGAATGCATGTGGTTCTGGGTATGACTTCGATGTTTACATCCATTTT
GGAGCTGGTGCGTACATTTGTGGTGAAGAGACTGCGCTTCTTGAAAGTCTCGAAGGGAAG
CAAGGAAAGCCTAGGTTGAAGCCTCCGTTCCCTGCTAATGCTGGTTTGTACGGTTGTCCC
ACAACTGTTACCAATGTGGAAACGGTGGCTGTTTCTCCTACCATTTTAAGGCGTGGACCT
GAGTGGTTTTCGAGTTTTGGTAGGAAGAATAACTCTGGGACGAAGCTGTTTTGTATATCG
GGCCATGTTAACAAGCCATGTACCGTTGAAGAGGAGATGAGTATCCCTCTCAAGGAACTG
ATTGAGAGGCATTGTGGAGGTGTCAGGGGTGGATGGGACAACCTGCTTGCTATCATTCCT
GGAGGTTCCTCTGTCCCTTTGATTCCTAAGAACATATGCGAGGATGTGCTGATGGATTTC
GATGCGCTCAAGGCTGTCCAGTCAGGGCTAGGAACTGCAGCGGTCATTGTGATGGACAAA
TCGACCGATGTTGTGGATGCAATTGCGAGGCTCTCTTACTTCTACAAGCATGAAAGCTGT
GGGCAGTGCACTCCGTGCAGAGAGGGAACAGGGTGGCTCTGGATGATCATGGAGAGGATG
AAAGTTGGCAATGCAAAGCTGGAGGAGATTGATATGCTTCACGAGGTAACCAAGCAGATC
GAAGGACACACAATCTGTGCATTGGGTGATGCAGCTGCATGGCCAGTGCAAGGTCTGATA
AGGCACTTTAGGCCGGAGCTTGAGAGAAGGATCAGGGAACGCGCTGAAAGGGAGTTGCTA
CAGGCTGCTGCTTAAAGCCCTTGTTAACGACAGGTTTGCATCTCCCATCCCTGAACTCTT
TTAATTTCCTGTTGCAAACTTAAAAGCAAAGATCTAGTTCATTGTTTCGCATGAAAAGGT
AGAATTGTGTATGTCAGTACTCGGCTCTATAGTTTCTTTGGGCCTTCATAGTCTATACCT
TTTTGCAGGGTATTTGCTAT
Pro Sequence
MAPVRGILGLQRAVSVWKESNRLAPALRSFSTQAASTSTTPQPPPPPPPP
EKTHFGGLKDEDRIFTNLYGLHDPFLKGAKKRGDWYRTKDLVLKGTDWIV
NEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKD
REIMRHDPHKLLEGCLIAGVGMRASAAYIYIRGEYVNERLNLEKARREAY
AAGLLGKNACGSGYDFDVYIHFGAGAYICGEETALLESLEGKQGKPRLKP
PFPANAGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNSGTKLFC
ISGHVNKPCTVEEEMSIPLKELIERHCGGVRGGWDNLLAIIPGGSSVPLI
PKNICEDVLMDFDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHE
SCGQCTPCREGTGWLWMIMERMKVGNAKLEEIDMLHEVTKQIEGHTICAL
GDAAAWPVQGLIRHFRPELERRIRERAERELLQAAA
mRNA Sequence
CGTCGTTTTCAGGTGGGCATAAAGCTCAGTGCGTCCACGCTTCACCTTCTTCCTCCTCCTCCTCCTCTAC
ATCCCCCCTTCTCGATTATAGAGAACAAAGGCTAAGTCTCTCTCTCTCCCCGATTTCTTCGCGAAAATTT
CGTATCCATGGCACCTGTGAGGGGGATTCTTGGTTTGCAGAGGGCAGTATCTGTTTGGAAGGAGAGTAAC
AGACTTGCTCCAGCTTTGAGATCATTCAGCACCCAAGCTGCGTCCACTTCCACCACTCCACAGCCACCTC
CACCTCCTCCGCCTCCGGAGAAGACTCATTTCGGTGGTCTCAAGGATGAAGATCGGATTTTTACCAACCT
CTACGGTCTGCACGACCCGTTTCTCAAGGGGGCGAAGAAGAGAGGTGATTGGTACAGGACCAAGGATTTG
GTGCTCAAGGGTACTGATTGGATTGTTAATGAGATGAAGAAGTCTGGTCTTCGTGGACGTGGCGGTGCTG
GTTTCCCTTCTGGTCTTAAGTGGTCCTTTATGCCTAAAGTCTCTGATGGGCGTCCTTCTTATTTGGTTGT
CAACGCTGATGAGAGTGAGCCTGGGACTTGTAAAGATAGGGAGATCATGCGTCATGACCCTCACAAGTTG
TTGGAAGGGTGTTTGATTGCTGGTGTTGGTATGAGAGCTAGTGCAGCTTATATTTACATCAGGGGTGAGT
ATGTGAATGAGCGTTTGAATCTAGAGAAGGCGAGGAGAGAGGCATATGCAGCTGGTCTCTTGGGGAAGAA
TGCATGTGGTTCTGGGTATGACTTCGATGTTTACATCCATTTTGGAGCTGGTGCGTACATTTGTGGTGAA
GAGACTGCGCTTCTTGAAAGTCTCGAAGGGAAGCAAGGAAAGCCTAGGTTGAAGCCTCCGTTCCCTGCTA
ATGCTGGTTTGTACGGTTGTCCCACAACTGTTACCAATGTGGAAACGGTGGCTGTTTCTCCTACCATTTT
AAGGCGTGGACCTGAGTGGTTTTCGAGTTTTGGTAGGAAGAATAACTCTGGGACGAAGCTGTTTTGTATA
TCGGGCCATGTTAACAAGCCATGTACCGTTGAAGAGGAGATGAGTATCCCTCTCAAGGAACTGATTGAGA
GGCATTGTGGAGGTGTCAGGGGTGGATGGGACAACCTGCTTGCTATCATTCCTGGAGGTTCCTCTGTCCC
TTTGATTCCTAAGAACATATGCGAGGATGTGCTGATGGATTTCGATGCGCTCAAGGCTGTCCAGTCAGGG
CTAGGAACTGCAGCGGTCATTGTGATGGACAAATCGACCGATGTTGTGGATGCAATTGCGAGGCTCTCTT
ACTTCTACAAGCATGAAAGCTGTGGGCAGTGCACTCCGTGCAGAGAGGGAACAGGGTGGCTCTGGATGAT
CATGGAGAGGATGAAAGTTGGCAATGCAAAGCTGGAGGAGATTGATATGCTTCACGAGGTAACCAAGCAG
ATCGAAGGACACACAATCTGTGCATTGGGTGATGCAGCTGCATGGCCAGTGCAAGGTCTGATAAGGCACT
TTAGGCCGGAGCTTGAGAGAAGGATCAGGGAACGCGCTGAAAGGGAGTTGCTACAGGCTGCTGCTTAAAG
CCCTTGTTAACGACAGGGTATTTGCTATTATTTTCAACGGAAATAAAATCTGAAGCACATTATTAGGGTT
TTGGGGATGCAAAGCTACTTCAGAAGGAGAAGAAGGTACTGTATTTGTTGAAATGGTTCATGTTAAACTT
TAATCAAACTGTATCAGAAAGAGCTCTGTTTGCTCTTTTGCTTATTCTACTTTCTTTCAATGTTTGTTTG
TTTTCTCATGACTACTGAGAGCACATTTTGGGAACAACCAACCAAACAAAACCTTTTCATATTTAAAATA
AAGGATACTCCTTTTTTGGGTTTTTAGACCGTTCATT