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DETAIL

Detail for ZS11_C09G73990.t1

Genome:
ZS11: ZS11_C09G73990.t1
ZS11_v0: BnaC09T0611700ZS
WE: WE_C09G76570.t1
WE_v0: BnaA10T0285700WE
Darmor: C09p73510.1_BnaDAR
BH: BnaC09T503000BH
Quinta: BnaA02T0008300QU
ZS2: BnaC09T602500ZS2
SW: BnaA10T342400SW
Express61: C09p055730.1_BnaEXP
Xiaoyun: BnaA10G0299100XY
P202: BnaA10G023910P202.1
BL: BnaC09T503000BH
TA: BnaA10T296000TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g31580D
RB: BnaC09T499000RB
No2127: BnaA10T0233800NO
P130: BnaA10G030370P130.1
Length: 576
KOG ID: KOG1263
KOG E-value: Not available
KOG Score: 1060.0
KOG Annotation: Secondary metabolites biosynthesis, transport and catabolism
Biological Process: GO:0046274(lignin catabolic process)
Cellular Component: GO:0048046(apoplast)
Molecular Function: GO:0005507(copper ion binding),GO:0016491(oxidoreductase activity),GO:0052716(hydroquinone:oxygen oxidoreductase activity)
KEGG Ortholog: K05909 E1.10.3.2; laccase [EC:1.10.3.2]
NR Protein: CDY10394.1
NR E-value: Not available
NR Score: 1220.3
NR Annotation: CDY10394.1 BnaCnng02950D [Brassica napus]
SwissProt Protein: Q8VZA1|LAC11_ARATH
SwissProt E-value: Not available
SwissProt Score: 1060.0
SwissProt Annotation: Laccase-11 OS=Arabidopsis thaliana OX=3702 GN=LAC11 PE=2 SV=1
CDS Sequence (1755 bp)
ATGAAGATGATTCGGTACCCGAGTTTTATGCAATCTCATCATTGCATAAAACCGGAAAAGTACCCGAGTT
TTCTCTTTCTCTTCTTGTATCTTCTTGGGTTTCTTGGCCAATCTCCGGTGGATGCAGCGGTGAAGAAGTA
CCAATTCGATGTTCAAATGAAGAACGTAAGCCGGTTATGCAATGCTAAACCGATTGTCACTGTCAACGGA
ATGTTCCCTGGACCAACGGTTTACGCAAGAGAAGGTGATCGAGTCATCATCAACGTCACCAACCATGTAC
AATACAACTTGTCCATCCATTGGCATGGGCTTAAACAGTACCGGAACGGTTGGGCAGATGGTCCAGCATA
CATAACTCAATGTCCGATGCAGACCGGACAGAGTTATGTTTATGATTTCAACGTAACCGGACAACGTGGG
ACTCTCTGGTGGCACGCACACATCCTCTGGTTACGAGCCACCGTGTACGGAGCTATCGTCATCTTGCCTC
AGCCAGGAAAACCGTATCCTTTCCCACAACCCTACCAAGAAACCAACATAGTCCTCGGAGAGTGGTGGAA
CGGAGACGTTGAGACGGCGGTTAACCAAGCCAACAAGCTGGGCGCACCGCCTCCGATGTCGGATGCTCAT
ACCATTAACGGAAAGCCCGGACCGCTCTTTCCATGTTCCGAGAAACACACATTCGTGGTGGAGGTGGAAG
CAGGCAAAACATACCTTCTAAGGATCATCAACGCAGCGCTAAACGACGAGCTGTTCTTCGGTATCGCAGG
CCACGACATGACCGTGGTGGAGATCGATGCAGTCTACACTAAACCGTTCACAACAAAATTTATTCTACTC
GGACCAGGTCAAACCACAAACGTTCTAGTCAAAACCAACCAGTCTCCAAACCGTTACTTCATGGCAGCGG
CTCCGTTCATGGACGCACCAGTATCAGTAGACAACAAAACCGTAACCGCGATTCTTCAATACAAAGGCGT
ACCAAACACGGTCATACCGATTCTACCAAAGCTTCCTTTGCCTAACGACACATCACACGCTTTGGACTAT
AACCAAAAGCTCAGAAGCCTCAACACGCCAAACTTTCCAGCGCTTGTCCCTTTAAAAGTCGACCGTAGAT
TGTTCTACACGATCGGTCTAGGCATCAACGCGTGTCCGACGTGTGTGAACGGAACAAATCTCGCGGCTTC
GATAAACAATATAACATTCGTTATGCCTAAAACTGCTCTCTTGAAAGCTCATTACTTTAACATCCCGAAC
GTTTTTAGGACAGATTTTCCTGATAGACCGCCTAAACCGTTTAACTACACCGGTGTGCCACTCACGGCTA
ACCTCGGGACTTCTACGGGGACTAGACTGAGTCGAGTTAAGTTCAATACGACGATTGAGCTTGTTTTGCA
AGATACCAATCTACTAACCGTTGAGTCACACCCTTTCCATCTTCACGGTTACAACTTCTTTGTGGTTGGA
ACTGGTGTTGGAAACTTTGATCCCAACACAGATCCTGCTAAGTTTAACCTCATTGACCCGCCTGAGAGGA
ACACAGTTGGAGTACCCACCGGAGGGTGGGCTGCCATCAGATTCAGAGCTGATAATCCAGGTGTTTGGTT
TATGCACTGTCACTTGGAAGTCCACACAATGTGGGGTTTGAAGATGGCTTTTGTCGTCGAGAACGGGAAC
ACACCTGAGCTTTCTGTTCTACCACCGCCCAAAGATTATCCGTCCTGTTAA
Upstream Sequence
AATATCTTCAATACAATCTACATAACCAAAAGCAACACGAGATTTAATACAAAGTACAATCTCATCATTG
CATAAAACCGGAAAATTAACCGGAAATGAAGATGATTCGGTACCCGAGTTTTATGCAATCTCATCATTGC
ATAAAACCGGAAAAGTACCCGAGTTTTCTCTTTCTCTTCTTGTATCTTCTTGGGTTTCTTGGCCAATCTC
CGGTGGATGCAGCGGTGAAGAAGTACCAATTCGATGTTCAAATGAAGAACGTAAGCCGGTTATGCAATGC
TAAACCGATTGTCACTGTCAACGGAATGTTCCCTGGACCAACGGTTTACGCAAGAGAAGGTGATCGAGTC
ATCATCAACGTCACCAACCATGTACAATACAACTTGTCCATCCATTGGCATGGGCTTAAACAGTACCGGA
ACGGTTGGGCAGATGGTCCAGCATACATAACTCAATGTCCGATGCAGACCGGACAGAGTTATGTTTATGA
TTTCAACGTAACCGGACAACGTGGGACTCTCTGGTGGCACGCACACATCCTCTGGTTACGAGCCACCGTG
TACGGAGCTATCGTCATCTTGCCTCAGCCAGGAAAACCGTATCCTTTCCCACAACCCTACCAAGAAACCA
ACATAGTCCTCGGAGAGTGGTGGAACGGAGACGTTGAGACGGCGGTTAACCAAGCCAACAAGCTGGGCGC
ACCGCCTCCGATGTCGGATGCTCATACCATTAACGGAAAGCCCGGACCGCTCTTTCCATGTTCCGAGAAA
CACACATTCGTGGTGGAGGTGGAAGCAGGCAAAACATACCTTCTAAGGATCATCAACGCAGCGCTAAACG
ACGAGCTGTTCTTCGGTATCGCAGGCCACGACATGACCGTGGTGGAGATCGATGCAGTCTACACTAAACC
GTTCACAACAAAATTTATTCTACTCGGACCAGGTCAAACCACAAACGTTCTAGTCAAAACCAACCAGTCT
CCAAACCGTTACTTCATGGCAGCGGCTCCGTTCATGGACGCACCAGTATCAGTAGACAACAAAACCGTAA
CCGCGATTCTTCAATACAAAGGCGTACCAAACACGGTCATACCGATTCTACCAAAGCTTCCTTTGCCTAA
CGACACATCACACGCTTTGGACTATAACCAAAAGCTCAGAAGCCTCAACACGCCAAACTTTCCAGCGCTT
GTCCCTTTAAAAGTCGACCGTAGATTGTTCTACACGATCGGTCTAGGCATCAACGCGTGTCCGACGTGTG
TGAACGGAACAAATCTCGCGGCTTCGATAAACAATATAACATTCGTTATGCCTAAAACTGCTCTCTTGAA
AGCTCATTACTTTAACATCCCGAACGTTTTTAGGACAGATTTTCCTGATAGACCGCCTAAACCGTTTAAC
TACACCGGTGTGCCACTCACGGCTAACCTCGGGACTTCTACGGGGACTAGACTGAGTCGAGTTAAGTTCA
ATACGACGATTGAGCTTGTTTTGCAAGATACCAATCTACTAACCGTTGAGTCACACCCTTTCCATCTTCA
CGGTTACAACTTCTTTGTGGTTGGAACTGGTGTTGGAAACTTTGATCCCAACACAGATCCTGCTAAGTTT
AACCTCATTGACCCGCCTGAGAGGAACACAGTTGGAGTACCCACCGGAGGGTGGGCTGCCATCAGATTCA
GAGCTGATAATCCAGGTGTTTGGTTTATGCACTGTCACTTGGAAGTCCACACAATGTGGGGTTTGAAGAT
GGCTTTTGTCGTCGAGAACGGGAACACACCTGAGCTTTCTGTTCTACCACCGCCCAAAGATTATCCGTCC
TGTTAAGAATCTGATTCTTTGTTCATTGTATTTTCATTGCTC
Downstream Sequence
GTACGTTTTCAACTTCCTGGTGACAATAAGTCCAAACACAAATTATATTGGTTTAACTAA
ACCGATTTATATGTTTGAGTTATATTCGATGTGTAAGGTTATGCATAATGTTTGGCAATT
TGGAACAGGTTCAAATGAAGAACGTAAGCCGGTTATGCAATGCTAAACCGATTGTCACTG
TCAACGGAATGTTCCCTGGACCAACGGTTTACGCAAGAGAAGGTGATCGAGTCATCATCA
ACGTCACCAACCATGTACAATACAACTTGTCCATCCATTGGTAAAGTCTCTCTTTCCTAC
GTCTCAAACCGGTTTAGTCATATTTATATAAACCAAAATGTAACGGTTTGATTTTCTTAT
AGGCATGGGCTTAAACAGTACCGGAACGGTTGGGCAGATGGTCCAGCATACATAACTCAA
TGTCCGATGCAGACCGGACAGAGTTATGTTTATGATTTCAACGTAACCGGACAACGTGGG
ACTCTCTGGTGGCACGCACACATCCTCTGGTTACGAGCCACCGTGTACGGAGCTATCGTC
ATCTTGCCTCAGCCAGGAAAACCGTATCCTTTCCCACAACCCTACCAAGAAACCAACATA
GTCCTCGGTTAGTGAAAATAAAATAACCGGTTTAGCCTGGTCTGGTTTAATTTACCGAAC
TTTTTCTCATTTCCCGGGGTTTTTTTAAATATAGGAGAGTGGTGGAACGGAGACGTTGAG
ACGGCGGTTAACCAAGCCAACAAGCTGGGCGCACCGCCTCCGATGTCGGATGCTCATACC
ATTAACGGAAAGCCCGGACCGCTCTTTCCATGTTCCGAGAAACGTAAAAAAAAAAATTAA
CCTCATTAAACCGGTTTAAACCGGATTAGATCTTTTTCTTTTACGCTAAATCGTTTGTTT
TTATATTAGACACATTCGTGGTGGAGGTGGAAGCAGGCAAAACATACCTTCTAAGGATCA
TCAACGCAGCGCTAAACGACGAGCTGTTCTTCGGTATCGCAGGCCACGACATGACCGTGG
TGGAGATCGATGCAGTCTACACTAAACCGTTCACAACAAAATTTATTCTACTCGGACCAG
GTCAAACCACAAACGTTCTAGTCAAAACCAACCAGTCTCCAAACCGTTACTTCATGGCAG
CGGCTCCGTTCATGGACGCACCAGTATCAGTAGACAACAAAACCGTAACCGCGATTCTTC
AATACAAAGGCGTACCAAACACGGTCATACCGATTCTACCAAAGCTTCCTTTGCCTAACG
ACACATCACACGCTTTGGACTATAACCAAAAGCTCAGAAGCCTCAACACGCCAAACTTTC
CAGCGCTTGTCCCTTTAAAAGTCGACCGTAGATTGTTCTACACGATCGGTCTAGGCATCA
ACGCGTGTCCGACGTGTGTGAACGGAACAAATCTCGCGGCTTCGATAAACAATATAACAT
TCGTTATGCCTAAAACTGCTCTCTTGAAAGCTCATTACTTTAACATCCCGAACGTTTTTA
GGACAGATTTTCCTGATAGACCGCCTAAACCGTTTAACTACACCGGTGTGCCACTCACGG
CTAACCTCGGGACTTCTACGGGGACTAGACTGAGTCGAGTTAAGTTCAATACGACGATTG
AGCTTGTTTTGCAAGATACCAATCTACTAACCGTTGAGTCACACCCTTTCCATCTTCACG
GTTACAACTTCTTTGTGGTTGGAACTGGTGTTGGAAACTTTGATCCCAACACAGATCCTG
CTAAGTTTAACCTCATTGACCCGCCTGAGAGGAACACAGTTGGAGTACCCACCGGAGGGT
GGGCTGCCATCAGATTCAGAGCTGATAATCCAGGTAAGATAAGTCAATGCACATATATGA
TGAGAATGATCATACTCCCTCATTACGTAAAATGCATGTTTTGAAGAAAAAAATGTTTTA
AAAGATATATTTTTATTTTTATGCATATTTATCAATTAAATGTAATTTTGTTTTAAAAAA
ATTACGTTAACTGATTTTTA
Pro Sequence
MKMIRYPSFMQSHHCIKPEKYPSFLFLFLYLLGFLGQSPVDAAVKKYQFD
VQMKNVSRLCNAKPIVTVNGMFPGPTVYAREGDRVIINVTNHVQYNLSIH
WHGLKQYRNGWADGPAYITQCPMQTGQSYVYDFNVTGQRGTLWWHAHILW
LRATVYGAIVILPQPGKPYPFPQPYQETNIVLGEWWNGDVETAVNQANKL
GAPPPMSDAHTINGKPGPLFPCSEKHTFVVEVEAGKTYLLRIINAALNDE
LFFGIAGHDMTVVEIDAVYTKPFTTKFILLGPGQTTNVLVKTNQSPNRYF
MAAAPFMDAPVSVDNKTVTAILQYKGVPNTVIPILPKLPLPNDTSHALDY
NQKLRSLNTPNFPALVPLKVDRRLFYTIGLGINACPTCVNGTNLAASINN
ITFVMPKTALLKAHYFNIPNVFRTDFPDRPPKPFNYTGVPLTANLGTSTG
TRLSRVKFNTTIELVLQDTNLLTVESHPFHLHGYNFFVVGTGVGNFDPNT
DPAKFNLIDPPERNTVGVPTGGWAAIRFRADNPGVWFMHCHLEVHTMWGL
KMAFVVENGNTPELSVLPPPKDYPSC
mRNA Sequence
AATATCTTCAATACAATCTACATAACCAAAAGCAACACGAGATTTAATACAAAGTACAATCTCATCATTG
CATAAAACCGGAAAATTAACCGGAAATGAAGATGATTCGGTACCCGAGTTTTATGCAATCTCATCATTGC
ATAAAACCGGAAAAGTACCCGAGTTTTCTCTTTCTCTTCTTGTATCTTCTTGGGTTTCTTGGCCAATCTC
CGGTGGATGCAGCGGTGAAGAAGTACCAATTCGATGTTCAAATGAAGAACGTAAGCCGGTTATGCAATGC
TAAACCGATTGTCACTGTCAACGGAATGTTCCCTGGACCAACGGTTTACGCAAGAGAAGGTGATCGAGTC
ATCATCAACGTCACCAACCATGTACAATACAACTTGTCCATCCATTGGCATGGGCTTAAACAGTACCGGA
ACGGTTGGGCAGATGGTCCAGCATACATAACTCAATGTCCGATGCAGACCGGACAGAGTTATGTTTATGA
TTTCAACGTAACCGGACAACGTGGGACTCTCTGGTGGCACGCACACATCCTCTGGTTACGAGCCACCGTG
TACGGAGCTATCGTCATCTTGCCTCAGCCAGGAAAACCGTATCCTTTCCCACAACCCTACCAAGAAACCA
ACATAGTCCTCGGAGAGTGGTGGAACGGAGACGTTGAGACGGCGGTTAACCAAGCCAACAAGCTGGGCGC
ACCGCCTCCGATGTCGGATGCTCATACCATTAACGGAAAGCCCGGACCGCTCTTTCCATGTTCCGAGAAA
CACACATTCGTGGTGGAGGTGGAAGCAGGCAAAACATACCTTCTAAGGATCATCAACGCAGCGCTAAACG
ACGAGCTGTTCTTCGGTATCGCAGGCCACGACATGACCGTGGTGGAGATCGATGCAGTCTACACTAAACC
GTTCACAACAAAATTTATTCTACTCGGACCAGGTCAAACCACAAACGTTCTAGTCAAAACCAACCAGTCT
CCAAACCGTTACTTCATGGCAGCGGCTCCGTTCATGGACGCACCAGTATCAGTAGACAACAAAACCGTAA
CCGCGATTCTTCAATACAAAGGCGTACCAAACACGGTCATACCGATTCTACCAAAGCTTCCTTTGCCTAA
CGACACATCACACGCTTTGGACTATAACCAAAAGCTCAGAAGCCTCAACACGCCAAACTTTCCAGCGCTT
GTCCCTTTAAAAGTCGACCGTAGATTGTTCTACACGATCGGTCTAGGCATCAACGCGTGTCCGACGTGTG
TGAACGGAACAAATCTCGCGGCTTCGATAAACAATATAACATTCGTTATGCCTAAAACTGCTCTCTTGAA
AGCTCATTACTTTAACATCCCGAACGTTTTTAGGACAGATTTTCCTGATAGACCGCCTAAACCGTTTAAC
TACACCGGTGTGCCACTCACGGCTAACCTCGGGACTTCTACGGGGACTAGACTGAGTCGAGTTAAGTTCA
ATACGACGATTGAGCTTGTTTTGCAAGATACCAATCTACTAACCGTTGAGTCACACCCTTTCCATCTTCA
CGGTTACAACTTCTTTGTGGTTGGAACTGGTGTTGGAAACTTTGATCCCAACACAGATCCTGCTAAGTTT
AACCTCATTGACCCGCCTGAGAGGAACACAGTTGGAGTACCCACCGGAGGGTGGGCTGCCATCAGATTCA
GAGCTGATAATCCAGGTGTTTGGTTTATGCACTGTCACTTGGAAGTCCACACAATGTGGGGTTTGAAGAT
GGCTTTTGTCGTCGAGAACGGGAACACACCTGAGCTTTCTGTTCTACCACCGCCCAAAGATTATCCGTCC
TGTTAAGAATCTGATTCTTTGTTCATTGTATTTTCATTGCTC