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Detail for scaffold0068G00080.t1

Genome:
ZS11: scaffold0068G00080.t1
ZS11_v0: BnaC01T0319300ZS
WE: WE_A04G10280.t1
WE_v0: Bnascaffold2480T0000300WE
Darmor: A04p09370.1_BnaDAR
BH: Bnascaffold0318T000500BH
Quinta: BnaC01T0215600QU
ZS2: BnaA04T084600ZS2
SW: BnaA04T089700SW
Express61: Not available
Xiaoyun: Not available
P202: Not available
BL: Bnascaffold0318T000500BH
TA: BnaA04T084100TA
Da-Ae: Not available
RB: Not available
No2127: BnaC01T0197100NO
P130: Not available
Length: 105
KOG ID: KOG4668
KOG E-value: 5.110000e-50
KOG Score: 166.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K03879 ND2; NADH-ubiquinone oxidoreductase chain 2 [EC:7.1.1.2]
NR Protein: YP_009228106.1
NR E-value: 1.700000e-51
NR Score: 206.8
NR Annotation: YP_009228106.1 NADH dehydrogenase subunit 2 (mitochondrion) [Brassica nigra]
SwissProt Protein: P15688|NU2M_BETVU
SwissProt E-value: 5.770000e-54
SwissProt Score: 178.0
SwissProt Annotation: NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris OX=161934 GN=ND2 PE=3 SV=2
CDS Sequence (322 bp)
ATGGATGCATTCGCCATAGTTTCAGCATTACGGCAAACCCGTGTCAAATATATAGCGGATTTGGGCGCTC
TAGCCAAAACGAATCCTATTTCGGCTATTACCTTCTCCATTACTATGTTCTCATACGCAGGAATACCCCC
GTTAGCCGGCTTTTGTAGCAAATTCTATTTGTTCTTCGCCGCTTTGGGTTGTGGGGCTTACTTCCTAGCC
CCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAATAAGTCAGTTTG
GAGGACCGAAGGCAGTTCTCCGTGCACCGGACACGTAG
Upstream Sequence
ATGGATGCATTCGCCATAGTTTCAGCATTACGGCAAACCCGTGTCAAATATATAGCGGATTTGGGCGCTC
TAGCCAAAACGAATCCTATTTCGGCTATTACCTTCTCCATTACTATGTTCTCATACGCAGGAATACCCCC
GTTAGCCGGCTTTTGTAGCAAATTCTATTTGTTCTTCGCCGCTTTGGGTTGTGGGGCTTACTTCCTAGCC
CCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAATAAGTCAGTTTG
GAGGACCGAAGGCAGTTCTCCGTGCACCGGACACGTAG
Downstream Sequence
GCTTACCGAATCAGTTGCGACACCGATGGGAATGCATGCTACGAAAGATAGGGTCGAGTC
TGATACATCAACCGTCTACTCAATATCCTTAGTAGAGTCCACAATCACTACACGAGATGA
ACCTTGGTTTGGTGAATTGAAGTTCGCCTTAGGTGTAATAGGACTCCCAGTTACTGCGCG
CGATCGTATACTGAGGTGCTCCCCGCCGGTTGTTGGAACGACGCGAGCCGGGACGGGCCT
GGATTCAGAAAGATGAAGGGCCCCAAAGTATAAATAGGGGGTTACAAATTCCCCATCTCA
TTGGGGGCGGAAAACGAATCGACATCTCGATGTGATACAGCCTTTTCTTTTTTAGTTGGG
AAAGAACGGCGAAGTCCATCCGAACCGAACCGTCCAATGAAGAATAAGAGGAGAGCAAAG
CGCCAATGGCGCGCGAAGCGCATGCGGAGCAGGCACGGAGAAAAATCAGTGTGGAGGAGA
AGCAGCCGAGCTCATTCCCTTCGCATCCTGGGCCCAAAGCAGTGCAGTCTTTCCTGGCCA
AATCAAGGATTTGGGGCTTCTTGCTACGCTACTTAACTATATAAATCCTTTAGTAATATA
TAAATGGAAAGATAGATCCATCCATCTATCCTATCCGATTTCCATTTTGATATCTAAAAA
AGAATCGATTTCATTCAACGTTTGATTCAAAGAACTGCGCTTAGCCCCCCCGCTCATGAA
ACGGCTCTGCTGCAATGGATGGCAGAGGGTCCGTAGTACCCAAAGCACTGGAGTTATCCA
GTATAGGGAAGGGGCCTAGAAGTGCCTACTACTACACCATACTAACACTTGGCTCTACAC
ATTTACCGAGCTAACCCCTGTCCAGTGCCTGGCAGAGCTAAGGGGCTTCAATCCTTATTC
CTTATCCCCCATCTTCGCCCAGGCTAACGGGGCCTTACTTATTCAGGGGGGAGCCCCGAG
AAGCACTGTTGAGAAGAAGATCCTAGGCCCCTCTTCATTCTCTACAGGGTTTCTTTCTTC
AATATATATATAGGTGACAACGAGCGAGGCAGAGATGGAAGAGATCAAAGACGAGAATAA
GAAGCCAGTAAACTTCTTCCTTTTTGATCATTTTGTTTGATAGAGGGGGATAGAAAAAAT
GGACAAAACTGACTCGCATTTCTCATCGAACAAATACGAAAAAGAATCATATTGAAAACT
GAAACCTCACCTCTCCTCTCGTTTCACTCTCGAGGAACGCCTTACAGTCGAGCTCCTTTG
TCACTCCCGTGCCTCTCTAGACAAGTGCTCGAGTCATGACTCCGAGGAACGCCTTTTCAG
TCGAGTTGCTAAAGCACCTCTCGCTACGCTCGAGATCTTTGAACCTTTCAGTCGAGATCT
TTGAACCTTTTAGTCGAGTGCCTTCGGCCCTCTCCCACCAAGGATAAGGTCTCATTATTA
GTTGATGAGGGGTCGAGTTACTGCGTTCCTAACCCAACTCCCTCCTTCTCCGAGCTTTGT
ATTATAAGTGATCCGAACCTGCCCGGAGTGAGCCTCCCATAGAGGCAAGTTGGTGAGCCG
TATGATGGGCAACTATCTCCTGCGGTTTGGAGAGGACTCAGCTGTTAGTTAGTATCCCCT
TGGTTTCGGGGTGGACCCTTTCACTCTATTTTTATATATACGCTTAGTGAAAAGAATGTT
TTTTGATACACCTAGGACATGGATTCTATATGAACCAATGGATCGTAATAAGTCGTTACT
ACTAGCAATGACTTCCTTTTTCATTACTTCATCCTTGCTATACCCTCTCCTTTGTTCTCA
GTTACTCATCAAATGGCAACTCAGTTCATATCTTTAAGTTCGATCATTGACAAGGTTCAA
AGAAAGGGTGGGCCGTCGGTTGAATCCAATATTATGCACTTTTTTTTTTCAAAATACGGA
ATTCACAACTAGAAAGGGAAAGGTTTCCGCTCCCCGCCATCAACGGTAATCAATTCTTAA
GAGTAAGCTCACCGCTTTCC
Pro Sequence
MDAFAIVSALRQTRVKYIADLGALAKTNPISAITFSITMFSYAGIPPLAG
FCSKFYLFFAALGCGAYFLAPVGVVTSVIGRWAAGRLPRISQFGGPKAVL
RAPDT
mRNA Sequence
ATGGATGCATTCGCCATAGTTTCAGCATTACGGCAAACCCGTGTCAAATATATAGCGGATTTGGGCGCTC
TAGCCAAAACGAATCCTATTTCGGCTATTACCTTCTCCATTACTATGTTCTCATACGCAGGAATACCCCC
GTTAGCCGGCTTTTGTAGCAAATTCTATTTGTTCTTCGCCGCTTTGGGTTGTGGGGCTTACTTCCTAGCC
CCAGTGGGAGTAGTGACTAGCGTTATAGGTCGTTGGGCGGCCGGAAGGTTGCCACGAATAAGTCAGTTTG
GAGGACCGAAGGCAGTTCTCCGTGCACCGGACACGTAG