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Detail for scaffold0113G00050.t1

Genome:
ZS11: scaffold0113G00050.t1
ZS11_v0: BnaC01T0314500ZS
WE: WE_C02G48820.t1
WE_v0: Bnascaffold3191T0000700WE
Darmor: C01p34660.1_BnaDAR
BH: BnaA04T087500BH
Quinta: BnaA04T0071300QU
ZS2: BnaC01T288400ZS2
SW: BnaA04T087500SW
Express61: C09p041940.1_BnaEXP
Xiaoyun: BnaA04G0084700XY
P202: BnaC01G057010P202.1
BL: BnaA04T087500BH
TA: BnaC02T375600TA
Da-Ae: Not available
RB: BnaA04T089600RB
No2127: BnaA04T0032300NO
P130: BnaC01G035070P130.1
Length: 521
KOG ID: KOG2870
KOG E-value: 3.990000e-81
KOG Score: 259.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016651(oxidoreductase activity, acting on NAD(P)H),GO:0048038(quinone binding),GO:0051287(NAD binding)
KEGG Ortholog: K03935 NDUFS2; NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:7.1.1.2]
NR Protein: VDD65199.1
NR E-value: 3.500000e-302
NR Score: 1042.0
NR Annotation: VDD65199.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: Q36450|NDUS2_NICSY
SwissProt E-value: 3.230000e-79
SwissProt Score: 256.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1
CDS Sequence (1588 bp)
ATGACAGCGCCGAGGAACGCCGAGGAACGCCTTGCCGGGAGGGCAATCTTCTCTTATGGTCTTCACCTCC
CGCCCGGCCTGGAAATTGAATCCAGCCCCCCCCTCTTTCTGATCCATTCATTTCTGCAAGCCCAGAGCGT
TGCCTCCCTTCTATTGCATAACCTAAAAAGCTATAAGCAAAGTACCAAAAGCGCGCTCCGCCCGGTGACT
AAGAAAGAAATTGCTGTAGAGAAACTTTTGAATTGCGAGGTACCATTACGAGCTCAATATATACGAGTGT
TATTCCGTGAAATAACTCGAATTTCAAATCATTCACTTGCTTTAACTACTCATGCTATGGATCGGGAGAA
ATTGTTGGAATTCTATGAAAGAGTCTCGGGAGCCAGGATGCATGCCAGTTTCATACGACCAGGTGGAGTG
GCACAAGATCTGCCTCTTGGCTTATGTCGAGATATTGATTCCTTCACACAACAATTTGCTTCTCGTATCG
ATGAATTAGAAGAGATGTCAACCGGCAACCGTATCTGGAAACAACGATTAGTGGATATTGGTACTGTCAC
TGCACAGCAAGCAAAGGATTGGGGATTCAGTGGTGTAATGTTAAGAGGTCGCGGGGGGAGCCACCCACCT
TTGAATGGTGTTGGTCCTACAGACCGTGAACGGATTTCGCCTCTGGCCTCTGGGCACGTCGGAACCGCGC
GATGCTGCGAGCACTTAGAGATGCGGGTAGAGGAAGCCTCAAAAAGCGAAGGCCGAGCTGTAGGTCACGT
GACCTGCACCGAGTTGGTGGCTGACTGGGCTTTTTCCTTGATCAAAGCAGATCAACTCGCCTTCTTTCTT
GGGGCTGTTAAGCCCAAGAACGACCAGTCTTGTGGTGGTACGGAAGGAACGGACTCCGCGAACGTCCCGC
GCCCCGGAAAGAAATTTCCTGCTGTTGCGGCTGGTGCTCGTTTGCGCGCGCGTGAACCAACTCAACAAAG
AAGGAAAGGATGCCCGGGGAGGCATCTGAGAATGATTCGAGCCTGGTGGGCCTACCCATCCCAACCAGGG
GTATGCTGGGATTCGCGAAGAGCAGCACCTTACGATGTTCATGACCAATCGGATCCTGACGTACCAGTAG
GTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTCTTCGGATCAT
TGTGCAATGTCTTAATCAAATGCCTAGCGGCATGATCAAAGCCGATGATCAGAAGCATTGGGAACCCCAA
TTTCTTTCTTCGGAGCCGTTTCTTTTCCCGTCCCCCCACCCCGGCATAGCGCTTCGCTTCCGGTTCTTCG
GAAGAATCAACTTACTTCTACCTTCTTCATTGATCTGGGGGAAAAGGAACCGTCTACCAGTTGGGAAGCT
AGACATCAAGGTGGTGCCTTACCGCGCCGCAGGCGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGAT
TCCAATGTACTGCGTCCAAGATCAGAACGAGCTTGCCGGCGGACCACTGCCGTCCCATTCTTGAGTGAGC
TGGAGCACAGCCATCTTATCCACTGA
Upstream Sequence
ATGACAGCGCCGAGGAACGCCGAGGAACGCCTTGCCGGGAGGGCAATCTTCTCTTATGGTCTTCACCTCC
CGCCCGGCCTGGAAATTGAATCCAGCCCCCCCCTCTTTCTGATCCATTCATTTCTGCAAGCCCAGAGCGT
TGCCTCCCTTCTATTGCATAACCTAAAAAGCTATAAGCAAAGTACCAAAAGCGCGCTCCGCCCGGTGACT
AAGAAAGAAATTGCTGTAGAGAAACTTTTGAATTGCGAGGTACCATTACGAGCTCAATATATACGAGTGT
TATTCCGTGAAATAACTCGAATTTCAAATCATTCACTTGCTTTAACTACTCATGCTATGGATCGGGAGAA
ATTGTTGGAATTCTATGAAAGAGTCTCGGGAGCCAGGATGCATGCCAGTTTCATACGACCAGGTGGAGTG
GCACAAGATCTGCCTCTTGGCTTATGTCGAGATATTGATTCCTTCACACAACAATTTGCTTCTCGTATCG
ATGAATTAGAAGAGATGTCAACCGGCAACCGTATCTGGAAACAACGATTAGTGGATATTGGTACTGTCAC
TGCACAGCAAGCAAAGGATTGGGGATTCAGTGGTGTAATGTTAAGAGGTCGCGGGGGGAGCCACCCACCT
TTGAATGGTGTTGGTCCTACAGACCGTGAACGGATTTCGCCTCTGGCCTCTGGGCACGTCGGAACCGCGC
GATGCTGCGAGCACTTAGAGATGCGGGTAGAGGAAGCCTCAAAAAGCGAAGGCCGAGCTGTAGGTCACGT
GACCTGCACCGAGTTGGTGGCTGACTGGGCTTTTTCCTTGATCAAAGCAGATCAACTCGCCTTCTTTCTT
GGGGCTGTTAAGCCCAAGAACGACCAGTCTTGTGGTGGTACGGAAGGAACGGACTCCGCGAACGTCCCGC
GCCCCGGAAAGAAATTTCCTGCTGTTGCGGCTGGTGCTCGTTTGCGCGCGCGTGAACCAACTCAACAAAG
AAGGAAAGGATGCCCGGGGAGGCATCTGAGAATGATTCGAGCCTGGTGGGCCTACCCATCCCAACCAGGG
GTATGCTGGGATTCGCGAAGAGCAGCACCTTACGATGTTCATGACCAATCGGATCCTGACGTACCAGTAG
GTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTCTTCGGATCAT
TGTGCAATGTCTTAATCAAATGCCTAGCGGCATGATCAAAGCCGATGATCAGAAGCATTGGGAACCCCAA
TTTCTTTCTTCGGAGCCGTTTCTTTTCCCGTCCCCCCACCCCGGCATAGCGCTTCGCTTCCGGTTCTTCG
GAAGAATCAACTTACTTCTACCTTCTTCATTGATCTGGGGGAAAAGGAACCGTCTACCAGTTGGGAAGCT
AGACATCAAGGTGGTGCCTTACCGCGCCGCAGGCGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGAT
TCCAATGTACTGCGTCCAAGATCAGAACGAGCTTGCCGGCGGACCACTGCCGTCCCATTCTTGAGTGAGC
TGGAGCACAGCCATCTTATCCACTGA
Downstream Sequence
GTTTGCGCAACAATTGAAGTGATGAGGCGTTCCTCTCCTTTCAGTCGAGTAAGAAATACC
TCGGGAAGTAGGGCTTCTATTGAAAGGCTTTCCCTCCCTCAAAAGGGGACTAGCTTTCAA
TACTAGTTCTTACGTTACGCTGCCATTTTTCCAATATCATTGAATAGCATGGCCTGGGGC
TAAAATAACTCAAGTGGGAGAGCCGTGTTATGGGTGACCTTATTGCACGGTTCAGAGAGC
ACTTGTGTATGTGATGCAAGTGAACGTGTACGAAAAAGCTGTCGTAAAGTTTCGTTTTTC
GTTCCGTTTTCGACCCTATCTATGTTTCTATGATGGCCCAAGAACACGCTCATTCTTCAG
CTGTAGAGAAACTTTTGAATTGCGAGGTACCATTACGAGCTCAATATATACGAGTGTTAT
TCCGTGAAATAACTCGAATTTCAAATCATTCACTTGCTTTAACTACTCATGCTATGGATG
TGGGAGCATTAACTCCGTTCCTGTGGGCTTTTGAGGAGCGGGAGAAATTGTTGGAATTCT
ATGAAAGAGTCTCGGGAGCCAGGATGCATGCCAGTTTCATACGACCAGGTGGAGTGGCAC
AAGATCTGCCTCTTGGCTTATGTCGAGATATTGATTCCTTCACACAACAATTTGCTTCTC
GTATCGATGAATTAGAAGAGATGTCAACCGGCAACCGTATCTGGAAACAACGATTAGTGG
ATATTGGTACTGTCACTGCACAGCAAGCAAAGGATTGGGGATTCAGTGGTGTAATGTTAA
GAGGTCGTGCGACATGAAGACATTGATAGCAATATGGGGGAAGTTCCCATCAGGCAACAA
TGGTTCCGCCTGACTCTACTTAAGCATGCATATTATGTAAGTGAAGACTTGGTGTGAAGC
CTTGGAGCTTACGTTAGAAGAGCAAAAGGCCCGGGGCTAGGGTGAGCTGAGGGGGGACAG
CGTAAGTGAGCGAATGTGTGTAAGCCCAGTCAAAGATGACTGTTCTAGGCGGGGGGAGCC
ACCCACCTTTGAATGGTGTTGGTCCTACAGACCGTGAACGGATTTCGCCTCTGGCCTCTG
GGCACGTCGGAACCGCGCGAGTTCACCGGGGTGGAGCACGGTCCGCCAAAACCGGCATAG
ATTAGGTGCTATTGATGGAACATGGTAAGCCTATCTTTCTCCATATGGAAGTGCTGCGAG
CACTTAGAGATGCGGGTAGAGGAAGCCTCAAAAAGCGAAGGCCGAGCTGTAGGTCACGTG
ACCTGCACCGAGTTGGTGGCTGACTGGGCTTTTTCCTTGATCAAAGCAGATCAACTCGCC
TTCTTTCTTGTTACCCAAAACTAAAGTCGGTCGAATGGTTTTTTTCCTGCCCCGGAACGT
CGAATGAAATAGGGGGCCGGGTTCTCTTTCTACAACCCTTTTGATATGATAGGCCCGGCT
ACCTTTCCCCTATCCCTTATGATTAGGGGGCTGTTAAGCCCAAGAACGACCAGTCTTGTG
GTGGTACGGAAGGAACGGACTCCGCGAACGTCCCGCGCCCCGGAAAGAAAGTCTCAACCA
GAACCACATTCCTTTTGCGTGCGGATGTAGCTAAGTGTCTGACTCTATTGGTCATAGTTT
CCTGCTGTTGCGGCTGGTGCTCGTTTGCGCGCGCGTGAACCAACTCAACAAAGAAGGAAA
GGATGCCCGGGGAGGCATCTGAGAATGATTCGAGCCGTATGAAGGGAAACTCTCACGTAC
AGTTTGTTTTTTTTGGGGGGGCAGGAGCCCGACAGGGTCCCCCACTGACTTGGCCCGGGC
CTAAGTGAAAGTGAAGTGGTGGGCCTACCCATCCCAACCAGGGGTATGCTGGGATTCGCG
AAGAGCAGCACCTTACGATGTTCATGACCAATCGGATCCTGACGTACCAGTAGGTACCAG
AGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTCTTCGGAT
CATTGTGCAATGTCTTAATC
Pro Sequence
MTAPRNAEERLAGRAIFSYGLHLPPGLEIESSPPLFLIHSFLQAQSVASL
LLHNLKSYKQSTKSALRPVTKKEIAVEKLLNCEVPLRAQYIRVLFREITR
ISNHSLALTTHAMDREKLLEFYERVSGARMHASFIRPGGVAQDLPLGLCR
DIDSFTQQFASRIDELEEMSTGNRIWKQRLVDIGTVTAQQAKDWGFSGVM
LRGRGGSHPPLNGVGPTDRERISPLASGHVGTARCCEHLEMRVEEASKSE
GRAVGHVTCTELVADWAFSLIKADQLAFFLGAVKPKNDQSCGGTEGTDSA
NVPRPGKKFPAVAAGARLRAREPTQQRRKGCPGRHLRMIRAWWAYPSQPG
VCWDSRRAAPYDVHDQSDPDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQC
LNQMPSGMIKADDQKHWEPQFLSSEPFLFPSPHPGIALRFRFFGRINLLL
PSSLIWGKRNRLPVGKLDIKVVPYRAAGERAVAFVVVLQDSNVLRPRSER
ACRRTTAVPFLSELEHSHLIH
mRNA Sequence
ATGACAGCGCCGAGGAACGCCGAGGAACGCCTTGCCGGGAGGGCAATCTTCTCTTATGGTCTTCACCTCC
CGCCCGGCCTGGAAATTGAATCCAGCCCCCCCCTCTTTCTGATCCATTCATTTCTGCAAGCCCAGAGCGT
TGCCTCCCTTCTATTGCATAACCTAAAAAGCTATAAGCAAAGTACCAAAAGCGCGCTCCGCCCGGTGACT
AAGAAAGAAATTGCTGTAGAGAAACTTTTGAATTGCGAGGTACCATTACGAGCTCAATATATACGAGTGT
TATTCCGTGAAATAACTCGAATTTCAAATCATTCACTTGCTTTAACTACTCATGCTATGGATCGGGAGAA
ATTGTTGGAATTCTATGAAAGAGTCTCGGGAGCCAGGATGCATGCCAGTTTCATACGACCAGGTGGAGTG
GCACAAGATCTGCCTCTTGGCTTATGTCGAGATATTGATTCCTTCACACAACAATTTGCTTCTCGTATCG
ATGAATTAGAAGAGATGTCAACCGGCAACCGTATCTGGAAACAACGATTAGTGGATATTGGTACTGTCAC
TGCACAGCAAGCAAAGGATTGGGGATTCAGTGGTGTAATGTTAAGAGGTCGCGGGGGGAGCCACCCACCT
TTGAATGGTGTTGGTCCTACAGACCGTGAACGGATTTCGCCTCTGGCCTCTGGGCACGTCGGAACCGCGC
GATGCTGCGAGCACTTAGAGATGCGGGTAGAGGAAGCCTCAAAAAGCGAAGGCCGAGCTGTAGGTCACGT
GACCTGCACCGAGTTGGTGGCTGACTGGGCTTTTTCCTTGATCAAAGCAGATCAACTCGCCTTCTTTCTT
GGGGCTGTTAAGCCCAAGAACGACCAGTCTTGTGGTGGTACGGAAGGAACGGACTCCGCGAACGTCCCGC
GCCCCGGAAAGAAATTTCCTGCTGTTGCGGCTGGTGCTCGTTTGCGCGCGCGTGAACCAACTCAACAAAG
AAGGAAAGGATGCCCGGGGAGGCATCTGAGAATGATTCGAGCCTGGTGGGCCTACCCATCCCAACCAGGG
GTATGCTGGGATTCGCGAAGAGCAGCACCTTACGATGTTCATGACCAATCGGATCCTGACGTACCAGTAG
GTACCAGAGGAGATCGCTATGATCGTTACTGTATCCGTATCGAAGAGATGCGACAAAGTCTTCGGATCAT
TGTGCAATGTCTTAATCAAATGCCTAGCGGCATGATCAAAGCCGATGATCAGAAGCATTGGGAACCCCAA
TTTCTTTCTTCGGAGCCGTTTCTTTTCCCGTCCCCCCACCCCGGCATAGCGCTTCGCTTCCGGTTCTTCG
GAAGAATCAACTTACTTCTACCTTCTTCATTGATCTGGGGGAAAAGGAACCGTCTACCAGTTGGGAAGCT
AGACATCAAGGTGGTGCCTTACCGCGCCGCAGGCGAACGCGCGGTAGCGTTCGTGGTGGTGCTTCAGGAT
TCCAATGTACTGCGTCCAAGATCAGAACGAGCTTGCCGGCGGACCACTGCCGTCCCATTCTTGAGTGAGC
TGGAGCACAGCCATCTTATCCACTGA