SEARCH

DETAIL

Detail for scaffold0186G00010.t1

Genome:
ZS11: scaffold0186G00010.t1
ZS11_v0: BnaC04T0169000ZS
WE: WE_A09G33170.t1
WE_v0: BnaC04T0164900WE
Darmor: BNapus_Darmor_BZH_scaffold_234p00290.1_BnaDAR
BH: Not available
Quinta: BnaC04T0161600QU
ZS2: Not available
SW: BnaA04T089600SW
Express61: Not available
Xiaoyun: Not available
P202: Not available
BL: Not available
TA: Not available
Da-Ae: Not available
RB: Not available
No2127: BnaC04T0213400NO
P130: Not available
Length: 205
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: -
Cellular Component: -
Molecular Function: GO:0008137(NADH dehydrogenase (ubiquinone) activity)
KEGG Ortholog: -
NR Protein: YP_004927456.1
NR E-value: 2.200000e-106
NR Score: 390.2
NR Annotation: YP_004927456.1 nad6 (mitochondrion) [Brassica oleracea]
SwissProt Protein: P60498|NU6M_BRACM
SwissProt E-value: 1.340000e-147
SwissProt Score: 411.0
SwissProt Annotation: NADH-ubiquinone oxidoreductase chain 6 OS=Brassica campestris OX=3711 GN=ND6 PE=2 SV=1
CDS Sequence (626 bp)
atgatactttctgttttgtcgagccctgctttggtctctggtttgatggttgcacgtgctaaaaatccgg
tacattccgttttgtttcccatcccagtctttcgcgacacttcaggtttacttcttttgttaggtctcga
cttcttcgctatgatcttcccagtagttcatataggagctatagccgtttcattccttttcgttgttatg
atgttccatattcaaatagcggagattcacgaagaagtattgcgctatttaccagtgagtgggattattg
gactgatcttttggtgggaaatgtttttcattttagataatgaaagcattccattactaccaacccaaag
aaatacgacctctcttagatatacggtttatgccggaaaggtacgaagttggactaatttggaaacattg
ggaaatttactttatacctactattctgtctggtttttggttcctagtcttattttattagtagccatga
ttggggctatagtactgactatgcataggactactaaggtgaaaagacaggatgtattccgacgaaatgc
tattgattttaggaggactataatgaggaggacgactgacccactcacgatctactaa
Upstream Sequence
atgatactttctgttttgtcgagccctgctttggtctctggtttgatggttgcacgtgctaaaaatccgg
tacattccgttttgtttcccatcccagtctttcgcgacacttcaggtttacttcttttgttaggtctcga
cttcttcgctatgatcttcccagtagttcatataggagctatagccgtttcattccttttcgttgttatg
atgttccatattcaaatagcggagattcacgaagaagtattgcgctatttaccagtgagtgggattattg
gactgatcttttggtgggaaatgtttttcattttagataatgaaagcattccattactaccaacccaaag
aaatacgacctctcttagatatacggtttatgccggaaaggtacgaagttggactaatttggaaacattg
ggaaatttactttatacctactattctgtctggtttttggttcctagtcttattttattagtagccatga
ttggggctatagtactgactatgcataggactactaaggtgaaaagacaggatgtattccgacgaaatgc
tattgattttaggaggactataatgaggaggacgactgacccactcacgatctactaa
Downstream Sequence
agggcaagtagcttgattggttcgaatccaattcgcgagcagatgagaaattgttgcacc
gtggactctgattcagtagcggcagcaaatccttttctattctacgatctgatcttgttt
gttgcccgatttgaaatctcccttataactccttctgggcgtccagctaaataggggtcc
taggcacatttctagcttaggcaaacaaaagaaatgaagagaaagcaccgaggaagatgt
ctgtgcccatctaattctttagcagctccggcatcggcaacagttggctcaaaagttgct
tcgctaggagtgtgctagcacagatgaatattccgtagattactaaaggcaaggaagagg
tgtgcttcaaagcatccgaaaagcaaagaagaatggtacagcacatcggtcgaaaaggcg
gtctattcccggtaaaggtcttttctattcactggacacagcatagcagcaaagaaaata
taaggcaaattgctgcgctagaccttcaagggaaagaaatcctcgcggattgatctgtat
tacatgaccgattgaagaaaggcgggaaggctagagacttcttttgcttctcttatctaa
gagcagctttctccgttctgaagcacaagcacagttattaatggtgctagagaggtcagg
acatactctcgagctatgatgaactgagacgactcttctccttgcttagaaagcggggac
gagaaagagctggttgctttgctagggggttaaagacattcggaaatggcgtcagcagag
aagctgatagacgagaaaaagaaagagctccgccaagtacaaggctaacaagaatgccca
agatttagctgagggaaatcagtgcgcttcttctcatctttgttacttagcggagagaat
tgagttggtcattgcttcggggcatctaagcgcacccagatctgcagcctcgcttccaac
cgcatcttagctaccagagtcattgaatacgacaatcacgcctagcttacttcgctagca
aagcagcacatcccttcactcgagacgactcttcgacttcttctttctttacgccaataa
gagcgcattcaatggatgattcttttactattgaggaataattgcctcaacaggaaagaa
gaggggctatatctctatactatataaaagcgggtccttggaccaaccatcgccagacag
acttagcagatgaaacgagtcgattgggtgagaaattaatatccagcacagaggagtgat
ggtcgatcgatagtgcatatgatatggatggatgatttctggcatttccatctttgactt
ttcttgatcttctgttagcgaagcataatttgtattggttgggtggggaatccgttcatc
tgttttcattcatctgtttccagcacatccagacaaaacgttaatcccctgaaatgttga
ataaaagcagcacgaaaatccgcatttttagggtttttcgacttgaatcaattccttata
tcccgtgttttcagcctcatcagtacgtgaagacccggtttcagatcctcgattttagga
atgttgtaagatattgtttttgattgacgaggtcaaaacagcctgaaaaagtgctaatat
cccgggatttttggatgcattttgatgaatcagtggagcttcgaaagatttaagcttatg
cttaacacatgcaagttgaaactgttcaataataggaaaagatgactacgataaggacag
ctcagcatggctattagtaggactccccttgggtacctaagacaggcagaggcagtaagc
ccaataagaagtcctcgttgctgacgtttacttgccccacacatattactggaataaagg
gtgatcagagctgtctttttctttaagcgtacgttaggtctactgactcaatcaacctct
tggccaaggctctatacccatagcccttaccactcttaacattatcttaaagataaggac
caacggcaaacagattcaag
Pro Sequence
MILSVLSSPALVSGLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFFA
MIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWE
MFFILDNESIPLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYSV
WFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDFRRTIMRRTTD
PLTIY
mRNA Sequence
atgatactttctgttttgtcgagccctgctttggtctctggtttgatggttgcacgtgctaaaaatccgg
tacattccgttttgtttcccatcccagtctttcgcgacacttcaggtttacttcttttgttaggtctcga
cttcttcgctatgatcttcccagtagttcatataggagctatagccgtttcattccttttcgttgttatg
atgttccatattcaaatagcggagattcacgaagaagtattgcgctatttaccagtgagtgggattattg
gactgatcttttggtgggaaatgtttttcattttagataatgaaagcattccattactaccaacccaaag
aaatacgacctctcttagatatacggtttatgccggaaaggtacgaagttggactaatttggaaacattg
ggaaatttactttatacctactattctgtctggtttttggttcctagtcttattttattagtagccatga
ttggggctatagtactgactatgcataggactactaaggtgaaaagacaggatgtattccgacgaaatgc
tattgattttaggaggactataatgaggaggacgactgacccactcacgatctactaa