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Detail for scaffold0314G00020.t1

Genome:
ZS11: scaffold0314G00020.t1
ZS11_v0: BnaC01T0314500ZS
WE: WE_C02G48820.t1
WE_v0: Bnascaffold3191T0000700WE
Darmor: A04p09590.1_BnaDAR
BH: BnaA04T087500BH
Quinta: BnaA04T0076100QU
ZS2: BnaC01T288400ZS2
SW: BnaA04T087500SW
Express61: C06p010510.1_BnaEXP
Xiaoyun: BnaA04G0084700XY
P202: BnaC01G057010P202.1
BL: BnaA04T087500BH
TA: BnaC02T375600TA
Da-Ae: Not available
RB: BnaA04T089600RB
No2127: BnaC04T0210600NO
P130: BnaC01G035070P130.1
Length: 554
KOG ID: KOG2870
KOG E-value: 1.140000e-94
KOG Score: 295.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016651(oxidoreductase activity, acting on NAD(P)H),GO:0048038(quinone binding),GO:0051287(NAD binding)
KEGG Ortholog: -
NR Protein: CDY65733.1
NR E-value: 4.200000e-290
NR Score: 1001.9
NR Annotation: CDY65733.1 BnaCnng48520D [Brassica napus]
SwissProt Protein: Q36450|NDUS2_NICSY
SwissProt E-value: 8.760000e-92
SwissProt Score: 290.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1
CDS Sequence (1688 bp)
atgcaagatgccagcggaatgatcggccggacagaggctagggcgaaggaaccccttcccaccgcgtcct
tccctgtgtatcggagatataaagcgagtgcaccggaaaagaacgggaactgggtcgatctattgcgaag
catccgaagcataactgcacactcacacaatctttgccgagagataggagcattcggtggaaccggtgaa
ctacacttgcttctggatagatgtgtgggacagagggctcgtgctgtagagaaacttttgaattgcgagg
taccattacgagctcaatatatacgagtgttattccgtgaaataactcgaatttcaaatcattcacttgc
tttaactactcatgctatggatgtgggagcattaactccgttcctgtgggcttttgaggagcgggagaaa
ttgttggaattctatgaaagagtctcgggagccaggatgcatgccagtttcatacgaccaggtggagtgg
cacaagatctgcctcttggcttatgtcgagatattgattccttcacacaacaatttgcttctcgtatcga
tgaattagaagagatgtcaaccggcaaccgtatctggaaacaacgattagtggatattggtactgtcact
gcacagcaagcaaaggattggggattcagtggtgtaatgttaagaggtcgcggggggagccacccacctt
tgaatggtgttggtcctacagaccgtgaacggatttcgcctctggcctctgggcacgtcggaaccgcgcg
agttcaccggggtggagcacgcctatctttctccatatggaagtgctgcgagcacttagagatgcgggta
gaggaagcctcaaaaagcgaaggccgagctgtaggtcacgtgacctgcaccgagttggtggctgactggg
ctttttccttgatcaaagcagatcaactcgccttctttcttcccaagaacgaccagtcttgtggtggtac
ggaaggaacggactccgcgaacgtcccgcgccccggaaagaaatttcctgctgttgcggctggtgctcgt
ttgcgcgcgcgtgaaccaactcaacaaagaaggaaaggatgcccggggaggcatctgagaatgattcgag
cctggtgggcctacccatcccaaccaggggtatgctgggattcgcgaagagcagcaccttacgatgttca
tgaccaatcggatcctgacgtaccagtaggtaccagaggagatcgctatgatcgttactgtatccgtatc
gaagagatgcgacaaagtcttcggatcattgtgcaatgtcttaatcaaatgcctagcggcatgatcaaag
ccgatgatcagaagcattgggaaccccaatttctttcttcggagccgtttcttttcccgtccccccaccc
cggcatagcgcttcgcttccggttcttcggaagaatcaacttacttctaccttcttcattgatctggggg
aaaaggaaccgtctaccagttgggaagctagacatcaaggtggtgccttaccgcgccgcaggcgaacgcg
cggtagcgttcgtggtggtgcttcaggattccaatgtactgcgtccaagatcagaacgagcttgccggcg
gaccactgccgtcccattcttgagtgagctggagcacagccatcttatccactga
Upstream Sequence
atgcaagatgccagcggaatgatcggccggacagaggctagggcgaaggaaccccttcccaccgcgtcct
tccctgtgtatcggagatataaagcgagtgcaccggaaaagaacgggaactgggtcgatctattgcgaag
catccgaagcataactgcacactcacacaatctttgccgagagataggagcattcggtggaaccggtgaa
ctacacttgcttctggatagatgtgtgggacagagggctcgtgctgtagagaaacttttgaattgcgagg
taccattacgagctcaatatatacgagtgttattccgtgaaataactcgaatttcaaatcattcacttgc
tttaactactcatgctatggatgtgggagcattaactccgttcctgtgggcttttgaggagcgggagaaa
ttgttggaattctatgaaagagtctcgggagccaggatgcatgccagtttcatacgaccaggtggagtgg
cacaagatctgcctcttggcttatgtcgagatattgattccttcacacaacaatttgcttctcgtatcga
tgaattagaagagatgtcaaccggcaaccgtatctggaaacaacgattagtggatattggtactgtcact
gcacagcaagcaaaggattggggattcagtggtgtaatgttaagaggtcgcggggggagccacccacctt
tgaatggtgttggtcctacagaccgtgaacggatttcgcctctggcctctgggcacgtcggaaccgcgcg
agttcaccggggtggagcacgcctatctttctccatatggaagtgctgcgagcacttagagatgcgggta
gaggaagcctcaaaaagcgaaggccgagctgtaggtcacgtgacctgcaccgagttggtggctgactggg
ctttttccttgatcaaagcagatcaactcgccttctttcttcccaagaacgaccagtcttgtggtggtac
ggaaggaacggactccgcgaacgtcccgcgccccggaaagaaatttcctgctgttgcggctggtgctcgt
ttgcgcgcgcgtgaaccaactcaacaaagaaggaaaggatgcccggggaggcatctgagaatgattcgag
cctggtgggcctacccatcccaaccaggggtatgctgggattcgcgaagagcagcaccttacgatgttca
tgaccaatcggatcctgacgtaccagtaggtaccagaggagatcgctatgatcgttactgtatccgtatc
gaagagatgcgacaaagtcttcggatcattgtgcaatgtcttaatcaaatgcctagcggcatgatcaaag
ccgatgatcagaagcattgggaaccccaatttctttcttcggagccgtttcttttcccgtccccccaccc
cggcatagcgcttcgcttccggttcttcggaagaatcaacttacttctaccttcttcattgatctggggg
aaaaggaaccgtctaccagttgggaagctagacatcaaggtggtgccttaccgcgccgcaggcgaacgcg
cggtagcgttcgtggtggtgcttcaggattccaatgtactgcgtccaagatcagaacgagcttgccggcg
gaccactgccgtcccattcttgagtgagctggagcacagccatcttatccactga
Downstream Sequence
ggtaccttctgcccacccttcctcctctgctttgagaactgtgtgaacggagagtgggca
gaagggaaggaggtcctcatacagagaaaatcagggaatgggtcgagatagatgacagcg
ccgaggaacgccgaggaacgccttgccgggagggcaatcttctcttatggtcttcacctc
ccgcccggcctggaaattgaatccagcccccccctctttctgatccattcatttctgcaa
gcccagagcgttgcctcccttctattgcataacctaaaaagctataagcaaagtaccaaa
agcgcgctccgcccggtgactaagaaagaaattggtttgcgcaacaattgaagtgatgag
gcgttcctctcctttcagtcgagtaagaaatacctcgggaagtagggcttctattgaaag
gctttccctccctcaaaaggggactagctttcaatactagttcttacgttacgctgccat
ttttccaatatcattgaatagcatggcctggggctaaaataactcaagtgggagagccgt
gttatgggtgaccttattgcacggttcagagagcacttgtgtatgtgatgcaagtgaacg
tgtacgaaaaagctgtcgtaaagtttcgtttttcgttccgttttcgaccctatctatgtt
tctatgatggcccaagaacacgctcattcttcagctgtagagaaacttttgaattgcgag
gtaccattacgagctcaatatatacgagtgttattccgtgaaataactcgaatttcaaat
cattcacttgctttaactactcatgctatggatgtgggagcattaactccgttcctgtgg
gcttttgaggagcgggagaaattgttggaattctatgaaagagtctcgggagccaggatg
catgccagtttcatacgaccaggtggagtggcacaagatctgcctcttggcttatgtcga
gatattgattccttcacacaacaatttgcttctcgtatcgatgaattagaagagatgtca
accggcaaccgtatctggaaacaacgattagtggatattggtactgtcactgcacagcaa
gcaaaggattggggattcagtggtgtaatgttaagaggtcgtgcgacatgaagacattga
tagcaatatgggggaagttcccatcaggcaacaatggttccgcctgactctacttaagca
tgcatattatgtaagtgaagacttggtgtgaagccttggagcttacgttagaagagcaaa
aggcccggggctagggtgagctgaggggggacagcgtaagtgagcgaatgtgtgtaagcc
cagtcaaagatgactgttctaggcggggggagccacccacctttgaatggtgttggtcct
acagaccgtgaacggatttcgcctctggcctctgggcacgtcggaaccgcgcgagttcac
cggggtggagcacggtccgccaaaaccggcatagattaggtgctattgatggaacatggt
aagcctatctttctccatatggaagtgctgcgagcacttagagatgcgggtagaggaagc
ctcaaaaagcgaaggccgagctgtaggtcacgtgacctgcaccgagttggtggctgactg
ggctttttccttgatcaaagcagatcaactcgccttctttcttgttacccaaaactaaag
tcggtcgaatggtttttttcctgccccggaacgtcgaatgaaatagggggccgggttctc
tttctacaacccttttgatatgataggcccggctacctttcccctatcccttatgattag
ggggctgttaagcccaagaacgaccagtcttgtggtggtacggaaggaacggactccgcg
aacgtcccgcgccccggaaagaaagtctcaaccagaaccacattccttttgcgtgcggat
gtagctaagtgtctgactctattggtcatagtttcctgctgttgcggctggtgctcgttt
gcgcgcgcgtgaaccaactc
Pro Sequence
MQDASGMIGRTEARAKEPLPTASFPVYRRYKASAPEKNGNWVDLLRSIRS
ITAHSHNLCREIGAFGGTGELHLLLDRCVGQRARAVEKLLNCEVPLRAQY
IRVLFREITRISNHSLALTTHAMDVGALTPFLWAFEEREKLLEFYERVSG
ARMHASFIRPGGVAQDLPLGLCRDIDSFTQQFASRIDELEEMSTGNRIWK
QRLVDIGTVTAQQAKDWGFSGVMLRGRGGSHPPLNGVGPTDRERISPLAS
GHVGTARVHRGGARLSFSIWKCCEHLEMRVEEASKSEGRAVGHVTCTELV
ADWAFSLIKADQLAFFLPKNDQSCGGTEGTDSANVPRPGKKFPAVAAGAR
LRAREPTQQRRKGCPGRHLRMIRAWWAYPSQPGVCWDSRRAAPYDVHDQS
DPDVPVGTRGDRYDRYCIRIEEMRQSLRIIVQCLNQMPSGMIKADDQKHW
EPQFLSSEPFLFPSPHPGIALRFRFFGRINLLLPSSLIWGKRNRLPVGKL
DIKVVPYRAAGERAVAFVVVLQDSNVLRPRSERACRRTTAVPFLSELEHS
HLIH
mRNA Sequence
atgcaagatgccagcggaatgatcggccggacagaggctagggcgaaggaaccccttcccaccgcgtcct
tccctgtgtatcggagatataaagcgagtgcaccggaaaagaacgggaactgggtcgatctattgcgaag
catccgaagcataactgcacactcacacaatctttgccgagagataggagcattcggtggaaccggtgaa
ctacacttgcttctggatagatgtgtgggacagagggctcgtgctgtagagaaacttttgaattgcgagg
taccattacgagctcaatatatacgagtgttattccgtgaaataactcgaatttcaaatcattcacttgc
tttaactactcatgctatggatgtgggagcattaactccgttcctgtgggcttttgaggagcgggagaaa
ttgttggaattctatgaaagagtctcgggagccaggatgcatgccagtttcatacgaccaggtggagtgg
cacaagatctgcctcttggcttatgtcgagatattgattccttcacacaacaatttgcttctcgtatcga
tgaattagaagagatgtcaaccggcaaccgtatctggaaacaacgattagtggatattggtactgtcact
gcacagcaagcaaaggattggggattcagtggtgtaatgttaagaggtcgcggggggagccacccacctt
tgaatggtgttggtcctacagaccgtgaacggatttcgcctctggcctctgggcacgtcggaaccgcgcg
agttcaccggggtggagcacgcctatctttctccatatggaagtgctgcgagcacttagagatgcgggta
gaggaagcctcaaaaagcgaaggccgagctgtaggtcacgtgacctgcaccgagttggtggctgactggg
ctttttccttgatcaaagcagatcaactcgccttctttcttcccaagaacgaccagtcttgtggtggtac
ggaaggaacggactccgcgaacgtcccgcgccccggaaagaaatttcctgctgttgcggctggtgctcgt
ttgcgcgcgcgtgaaccaactcaacaaagaaggaaaggatgcccggggaggcatctgagaatgattcgag
cctggtgggcctacccatcccaaccaggggtatgctgggattcgcgaagagcagcaccttacgatgttca
tgaccaatcggatcctgacgtaccagtaggtaccagaggagatcgctatgatcgttactgtatccgtatc
gaagagatgcgacaaagtcttcggatcattgtgcaatgtcttaatcaaatgcctagcggcatgatcaaag
ccgatgatcagaagcattgggaaccccaatttctttcttcggagccgtttcttttcccgtccccccaccc
cggcatagcgcttcgcttccggttcttcggaagaatcaacttacttctaccttcttcattgatctggggg
aaaaggaaccgtctaccagttgggaagctagacatcaaggtggtgccttaccgcgccgcaggcgaacgcg
cggtagcgttcgtggtggtgcttcaggattccaatgtactgcgtccaagatcagaacgagcttgccggcg
gaccactgccgtcccattcttgagtgagctggagcacagccatcttatccactga