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Detail for scaffold0653G00050.t1

Genome:
ZS11: scaffold0653G00050.t1
ZS11_v0: Bnascaffold2794T0000300ZS
WE: WE_C02G02320.t1
WE_v0: BnaA06T0194300WE
Darmor: BNapus_Darmor_BZH_scaffold_287p00080.1_BnaDAR
BH: BnaC01T364500BH
Quinta: BnaA06T0195300QU
ZS2: BnaC09T239900ZS2
SW: BnaC09T242600SW
Express61: C09p042010.1_BnaEXP
Xiaoyun: BnaC01G0351700XY
P202: BnaC09G043720P202.1
BL: BnaC01T364500BH
TA: BnaC02T384800TA
Da-Ae: Not available
RB: BnaC09T102500RB
No2127: BnaC09T0207600NO
P130: BnaC09G026860P130.1
Length: 177
KOG ID: KOG1713
KOG E-value: 3.800000e-118
KOG Score: 332.0
KOG Annotation: Energy production and conversion
Biological Process: -
Cellular Component: -
Molecular Function: GO:0016651(oxidoreductase activity, acting on NAD(P)H),GO:0008137(NADH dehydrogenase (ubiquinone) activity)
KEGG Ortholog: -
NR Protein: VDD65813.1
NR E-value: 1.000000e-96
NR Score: 357.8
NR Annotation: VDD65813.1 unnamed protein product [Brassica oleracea]
SwissProt Protein: A4QLJ7|NDHJ_LOBMA
SwissProt E-value: 1.610000e-117
SwissProt Score: 332.0
SwissProt Annotation: NAD(P)H-quinone oxidoreductase subunit J, chloroplastic OS=Lobularia maritima OX=226051 GN=ndhJ PE=3 SV=1
CDS Sequence (541 bp)
ATGGTAAATGTGAAATACTTAAATTTATATAAAAAAGGTGTGGGGGAAATAAAAAAGATGCAGGGCACTT
TGTCCGTTTGGCTAGCCAAACGCGGGCTGGTTCATAGATCGTTGGGCTTCGATTACCAAGGAATAGAGAC
TTTACAAATAAAGCCCGAAGATTGGCATTCTATTGCTGTAATTTTATATGTATATGGTTACAATTATTTA
CGTTCCCAATGTGCCTATGATGTGGCACCAGGTGGCCTCTTAGCCAGTGTGTATCATCTTACGAGAATAG
AATATGGTGTCAATCAAGCGGAAGAAGTTTGCATAAAAGTATTTACTCACAGGAGTAATCCCAGAATTCC
ATCTGTTTTCTGGGTTTGGAAAAGTACGGATTTTCAAGAACGGGAATCTTATGATATGTTAGGAATCACT
TATGATAGCCATCCGCGGCTGAAACGGATCTTAATGCCCGAAAGTTGGATAGGGTGGCCTTTACGTAAGG
ATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTTATTGA
Upstream Sequence
ATGGTAAATGTGAAATACTTAAATTTATATAAAAAAGGTGTGGGGGAAATAAAAAAGATGCAGGGCACTT
TGTCCGTTTGGCTAGCCAAACGCGGGCTGGTTCATAGATCGTTGGGCTTCGATTACCAAGGAATAGAGAC
TTTACAAATAAAGCCCGAAGATTGGCATTCTATTGCTGTAATTTTATATGTATATGGTTACAATTATTTA
CGTTCCCAATGTGCCTATGATGTGGCACCAGGTGGCCTCTTAGCCAGTGTGTATCATCTTACGAGAATAG
AATATGGTGTCAATCAAGCGGAAGAAGTTTGCATAAAAGTATTTACTCACAGGAGTAATCCCAGAATTCC
ATCTGTTTTCTGGGTTTGGAAAAGTACGGATTTTCAAGAACGGGAATCTTATGATATGTTAGGAATCACT
TATGATAGCCATCCGCGGCTGAAACGGATCTTAATGCCCGAAAGTTGGATAGGGTGGCCTTTACGTAAGG
ATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTTATTGA
Downstream Sequence
ATGATAAAAAATTTGAATGATAAAAATGAGTCTTAGTTTCTACAACTACGGACCTTCGCG
GAATATTTTGAATTCGAGTCGTTTTTAGATCAAACAAACAGAAGAATTAAGGTCTTATTC
ATATTATTATAGATAGCTTAATCTCCAATTTGAAAGATACTTTTTTCCTAAAAGCCGAGC
CAATAGGATGAACTAAAAAAAAAAAAAAGAGTTCTGCATTATGAACTTTGTATCGCGCAC
ATAACTTAGTCAACTTTAGTCACATAACTGGGAATGAATAAATAAGATTGGAAAGCAATA
CAATAAATGGGGGGGTTAAAATTCTATTTCTATTGTATCTAATCTAATGAATCTTGGGGG
TATTTCTGCCCTTCAACGATAGATACTATAGATAGATATAGATAGATAGATATAGATCTT
TTTTTTTTTACTTTTTTTTATTCTTTCAACCAGAACTTTCCTTTCGAATATGTATTAGGT
ATAAAGTCTTATACATTTTTTTTGAACGGATGGATCCACAACATGAACAAAAAAGAGAGG
GGGATAAAGGATTATTGCACTTTTTTTACTAAAGATACGTTTAATTTGAAGACTATAAAC
TTATCAAAATTAATCAATCCTATGCCAAGAACCAGATTTGAACTGGTGACACGAGGATTT
TCAGTCCTCTGCTCTACCAACTGAGCTATCCCGGCCATTACCGAAGTATCATTCTCATTT
TATGAGATGACTTAGGTCTATGTCAATTAAAAGAAACGCAAAAGTAGTAAATGAAAAAAG
TTTTGGACCGGGAATTTATTGGATCTTCGAAAAGAAGACTTTCTAAGTTTTAGAATGAAA
AATTATTTAGATTCGAAATAATTCAAATCGATAGTTCTTTCTCATTTGTATATGTATGAT
ATATCCCACAAGACTTGTATATAATAAGAAAAGAAATTCGAGTTTGTAAAAGTGTCGGAT
GAATGAAAAAAGATCAATGAATTCTTGAATAACTAAAAAAAGGGTAAGGTGTCAAACAGA
CTTTTTTAGGGAGTAGGGTTGGGGATAGAGGGACTTGAACCCTCACGATTTTAAAAGTCA
ACGGATTTTCATCTTACTATAAATTTCATTGTTGTCAGTATTGACATGTAGAATGGGACT
CTATCTTTATTCTCGTCCGATTAATAAGTTCCACCAAGGATCTATCAGACTATGAAGTGA
ATCGTTTGATTCAACACAAGGGATTGAACTCCATTTGTTAGAACAGCTTCCATTGAGTCT
CTGCACCTATCCCGCTTTCTAAACTCTGGTTTGTTCGCGTAACCCAGGATTTGGCTCAGG
ATTGCCCATTGTTAATTCCAGGGTTTCTCTGAATTTGAAAGTTATCACTTAGTAGGTTTC
CATACCAAGGCTCAATCCAATTAAGTCCGTAGCGTCTACCAATTCCGCCATATCCCCCTT
TTTGCTTTGAGATTAGGATCTCATTATGATGTCTTTCCACTTTTTCTTATGACGAAACCT
TGGAATTCATTACATACAGATACTTATTTTATTTCTTTGGTATCTTCTTGCATTTTTTTT
AGCCCCATCCATATTGATTTAGTTTAATCAACAAAGATTCTATCATTTTTGTATTTGCAA
TTCAATATGGTTATATATTAGAGAACATATATATGTTCTTCCTTTTCTCATCGTTGTCTT
CAATTTTAAGAAATAGTCGAACGGTCGATTCGTTTTTTTTACTTCCATGAAAAGAAATTT
ATGATCATTATTGAAACTTAGAATTCTACAATGTGCAATGTAAAAAGATTATAAGTCTAC
TTCGTAGATTTGAAATTCGAATAATTCTAAAAAAGTATATTCGAAATGAATATTCGAATA
TTCATTCTAATAATTTAATTCTATAAAATAATAAAGAATATAAAAAGAGAAAAAGTATCA
AATAATAATAATTGCATGAGGTTAGAACAAAAAAACCAAGAATTTCAAATCAGATATCAT
TTAACTTTAAAAAAAAAGCT
Pro Sequence
MVNVKYLNLYKKGVGEIKKMQGTLSVWLAKRGLVHRSLGFDYQGIETLQI
KPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVNQA
EEVCIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRI
LMPESWIGWPLRKDYIAPNFYEIQDAY
mRNA Sequence
ATGGTAAATGTGAAATACTTAAATTTATATAAAAAAGGTGTGGGGGAAATAAAAAAGATGCAGGGCACTT
TGTCCGTTTGGCTAGCCAAACGCGGGCTGGTTCATAGATCGTTGGGCTTCGATTACCAAGGAATAGAGAC
TTTACAAATAAAGCCCGAAGATTGGCATTCTATTGCTGTAATTTTATATGTATATGGTTACAATTATTTA
CGTTCCCAATGTGCCTATGATGTGGCACCAGGTGGCCTCTTAGCCAGTGTGTATCATCTTACGAGAATAG
AATATGGTGTCAATCAAGCGGAAGAAGTTTGCATAAAAGTATTTACTCACAGGAGTAATCCCAGAATTCC
ATCTGTTTTCTGGGTTTGGAAAAGTACGGATTTTCAAGAACGGGAATCTTATGATATGTTAGGAATCACT
TATGATAGCCATCCGCGGCTGAAACGGATCTTAATGCCCGAAAGTTGGATAGGGTGGCCTTTACGTAAGG
ATTATATTGCCCCCAATTTTTATGAAATACAAGATGCTTATTGA