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DETAIL

Detail for scaffold1903G00030.t1

Genome:
ZS11: scaffold1903G00030.t1
ZS11_v0: BnaA10T0078100ZS
WE: WE_A04G10230.t1
WE_v0: BnaC01T0254200WE
Darmor: C01p34800.1_BnaDAR
BH: Bnascaffold0318T000300BH
Quinta: BnaA04T0074500QU
ZS2: BnaA04T084200ZS2
SW: BnaA04T089500SW
Express61: Not available
Xiaoyun: BnaA04G0084100XY
P202: Not available
BL: Bnascaffold0318T000300BH
TA: BnaA04T084500TA
Da-Ae: Not available
RB: BnaC01T322400RB
No2127: BnaC01T0200600NO
P130: Not available
Length: 100
KOG ID: KOG4669
KOG E-value: 1.300000e-64
KOG Score: 191.0
KOG Annotation: Energy production and conversion
Biological Process: GO:0042773(ATP synthesis coupled electron transport)
Cellular Component: -
Molecular Function: GO:0016651(oxidoreductase activity, acting on NAD(P)H)
KEGG Ortholog: -
NR Protein: YP_004927484.1
NR E-value: 2.500000e-44
NR Score: 183.0
NR Annotation: YP_004927484.1 nad4L (mitochondrion) [Brassica oleracea]
SwissProt Protein: Q04614|NU4LM_ARATH
SwissProt E-value: 4.780000e-55
SwissProt Score: 169.0
SwissProt Annotation: NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L PE=2 SV=2
CDS Sequence (307 bp)
atggatcctatcaaatatttcacattttctatgattatttctattttaggtattcggggaatcctcctta
atagacgaaatattcctattatgtcaatgccaattgaatcaatgttattagctgtgaattcgaacttttt
ggtattttccgtttcttcggatgatatgatgggtcaagtatttgcttcattggttccaacggtggcagct
gcggaatccgctattgggttagccattttcgttataactttccgagtccgagggactattgctgtagaat
ttattaatagcattcaaggttaa
Upstream Sequence
atggatcctatcaaatatttcacattttctatgattatttctattttaggtattcggggaatcctcctta
atagacgaaatattcctattatgtcaatgccaattgaatcaatgttattagctgtgaattcgaacttttt
ggtattttccgtttcttcggatgatatgatgggtcaagtatttgcttcattggttccaacggtggcagct
gcggaatccgctattgggttagccattttcgttataactttccgagtccgagggactattgctgtagaat
ttattaatagcattcaaggttaa
Downstream Sequence
ccattcctctcctttcagtcgagacttctcctggtggaccttacagtcgagtcactttgt
acctcttctcaaattaggaaaatacgaagttcgaggaacgcctttcgttctctttttttc
ttggtcggcagggtcagggcctttctcgctgggcgagcgcatccgattcaaaagtccttt
cctaaaccacttcccgttcagttgctgaaaaagaaatggggataagctttctaaatgaga
ttgagttcgacgaatatggatgctagaaagatgttatttgctgctattctatctatttgt
gcattaagttcgaagaagatctcaatctataatgaagaaatgatagtagctctttgtttt
ataggctttatcatattcagtcgtaagagtttaggtacgactttcaaagcgactctcgac
gggagaatccaggctattcaggaagaatcgcagcaattccccaatcctaacgaagtagtt
cctccggaatccaatgaacaacaacgattacttaggatcagcttgcgaatttgtggcacc
gtagtagaatcattaccaatggcacgctgtgcgcctaagtgcgaaaagacagtgcaagct
ttgttatgccgaaacctaaatgttaagtcagcaacacttacaaatgccacttcttcccgt
cgcatccgttttcaggacgatctagtcacaaagttttacaccttagtgggtaatcaattt
gcctactcttctatctcgaaagcagaaagagtagaattcattcgagagagcttggtggtc
ttaagaatggttcggggggggggtttctcttaagaataaagaagaggaattgaatctaat
tgatgttcatgctctcagaagagcggatccaataccaagactacttctttctcaggaagt
gcagcaagtacttgaggaattttgggatatcatgccccacgaattagttgccaagtgcgc
cctagtagggcagtctaccacaagatcgagttggagcctggagccaaacccccaactatt
tagactggggctgggttaagcggatggccccccaactagcatctattagttaaggggatt
ggttgaactcaggaatcaatttcaggaactcatggaggcctattttgattccagcctcca
aggcagtttttccctatattgattgctgctgggaaaaggttggggagcccctttccagaa
aaagcgggagccttgtgcattgattatcgggcgctcaacaaggtaacctaactatcaaaa
acaagtatccacttttattgcagacttcttcgcccgcgcgagatacttctcgaagttgga
tctacggcgggatactaccaggtgcgtatcgcggaaggagacgagccaaagacgacctgt
gtgacaagcaagcaaccttactaataaaggggccttttcttgctcgttagcgccccccta
cccctattatattagttagccctccttcctttactcttggtacctagacactttgaatca
aggctacgccccaggtcccttagttcaagctccatcccacatccatttgcccaaacgacg
aataagctgcgaaagaatgagctcctgtcgcaattgaagaagaatatgctgctagtcttt
tagccacagacgctcttgagtcaatctcagctgtggtcctatcagctcaaccagttgccg
gtcttgtttgcgtagtaaatggttttggcggaatacggtgtttgagagtaagctgctatt
caaaaatatggtctgtctgtaagcaattacctttcctggcttgctttagtcggtgactct
atgccctctgcttttcagtcgagttgctaaagcacctctcgccaagacgtcttttccagt
gtcgatcatcttgctttcccgaattcgttagattgccgccagttccaggattgggagaac
ataggattggtagttgggctctgctcgcttggttggtcattcccttctgtcttggttgat
ggataggtgagcgcatgcgg
Pro Sequence
MDPIKYFTFSMIISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFS
VSSDDMMGQVFASLVPTVAAAESAIGLAIFVITFRVRGTIAVEFINSIQG
mRNA Sequence
atggatcctatcaaatatttcacattttctatgattatttctattttaggtattcggggaatcctcctta
atagacgaaatattcctattatgtcaatgccaattgaatcaatgttattagctgtgaattcgaacttttt
ggtattttccgtttcttcggatgatatgatgggtcaagtatttgcttcattggttccaacggtggcagct
gcggaatccgctattgggttagccattttcgttataactttccgagtccgagggactattgctgtagaat
ttattaatagcattcaaggttaa