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Detail for ZS11_A01G00100.t1

Genome:
ZS11: ZS11_A01G00100.t1
ZS11_v0: BnaA01T0003100ZS
WE: WE_scaffold0003G02990.t1
WE_v0: Bnascaffold286T0001600WE
Darmor: A01p00160.1_BnaDAR
BH: BnaA01T001600BH
Quinta: BnaC07T0520200QU
ZS2: BnaA01T001900ZS2
SW: BnaA01T002300SW
Express61: A01p000200.1_BnaEXP
Xiaoyun: BnaA06G0478000XY
P202: BnaA01G000180P202.1
BL: BnaA01T001600BH
TA: BnaA01T001800TA
Da-Ae: rna-gnl|WGS:JAGKQM|BnaA01g13300D
RB: BnaA01T000800RB
No2127: BnaA06T0448000NO
P130: BnaA01G000180P130.1
Length: 492
KOG ID: -
KOG E-value: Not available
KOG Score: Not available
KOG Annotation: -
Biological Process: GO:0005975(carbohydrate metabolic process)
Cellular Component: -
Molecular Function: GO:0004553(hydrolase activity, hydrolyzing O-glycosyl compounds)
KEGG Ortholog: K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
NR Protein: RID77089.1
NR E-value: 3.600000e-293
NR Score: 1011.9
NR Annotation: RID77089.1 hypothetical protein BRARA_A00022 [Brassica rapa]
SwissProt Protein: Q8GY58|GUN23_ARATH
SwissProt E-value: Not available
SwissProt Score: 776.0
SwissProt Annotation: Endoglucanase 23 OS=Arabidopsis thaliana OX=3702 GN=At4g39000 PE=2 SV=2
CDS Sequence (1500 bp)
ATGAAACCATCGATTTTAATCTTAACAGTTTTCGTACTTCTCCTCCTGGTACCAACGGTGATTCCTCACA
ACTACTCGGATGCTCTGCATAAGTCAATCCTATTTTTCGAAGGTCAACGCTCCGGTCGACTTCCCAGACA
ACAAAGGATGTTGTGGCGTGGTGACTCTGCACTCAAGGACGGCGAAAACCTCAACACCGACCTCGTTGGT
GGTTACTACGACGCCGGTGACAACGTTAAGTTTCATTTTCCAATGGCTTTTACGGCCACGATGCTTGCTT
GGAGTTCTATCGACTTCAGTTGTTACATGTCTGACAATGATTTTAGACACAACCTCGTAAATATCAAGTG
GGCTACTGATTATCTCCTTAAGACTGTCTCACAACTCCCTCATCGCATTTTCGTCCAAGTAGGTGAAGCA
CAGCCCGACCATAATTGTTGGGAAAGACCGGAAGATATGGATACGCCACGAACCGCTTTCGCTCTAGATG
CACCAGGGCCAGCCTCCGATCTAGCGGGTGAAATCGCTGCAGCTCTGGCAGCTGCTTCTATCGCATTCAA
ACAATCGAGGCCTACATATTCCAAATTATTGCTCAGCAAAGCCATACAAACGTTTCAGTACGCAGATATG
CATCGAGGTTCTTATGCCGACAATCAGAACGTGCACAACGCCGCTTGCCCTTTCTACTGCAGTAATAATG
GATATAAGGATGAGTTGCTCTGGGGAGCTGCGTGGTTGAGGAGGGCGACTGGTAGTGATAATTACCTAGA
GTACTTGGTGAACAATCGTGAAACTTTCGGTGTAGATTACAATTACTTGGACTTTGGCTGGGACAGCAAA
TTTGGGGGAGTTGATGTTCTCATTGCCAAGGAAGTATTTGAGAAGAATGTGAGTGCGTTAACACCATTTA
AAGATATTGCGGAGAAAATGATGTGTGCAGTATTTCCGGAAACCGCTGGTCTACACATGAGTTACACACC
CGGCGGTCTTCTTTACAAACCCGTTGGCAGCCAGCTCCAGAGCACGGCCGCAATGTCTTTCCTCATCCTT
ACCTACGCGGACTACCTCTCTAAATCCTCTCAACAACTCAGTTGCGGTAACCTCAAGTTTCAACCCGATT
CTCTTCGGCGCATAGTTAAACGACAGGTGGACTACATTTTGGGAGATAATCCAATGCACGTGTCATACAT
GGTTGGGTACGGCGATCAGTACCCGCGACAGGTCCACCACCGTGGCTCGTCTATACCGTCTGTTAAGGTT
CAAAGCACTGCGTTCGGGTGCACACAAGGATGGAATATTTTCCATTCAGACAATCCAAACCCAAACATAT
TAGTAGGAGCGGTGGTTGGCGGGCCTAACGTAGATGATACATTCATTGGAAAACGGACAAATGCTACCGA
CACTGAGCCCACGACGTATATCAATGCACCTCTAGTTGGTGTCTTTGCCTATTTTAATAGCAATCCCAAC
ATCACCTGA
Upstream Sequence
ATGAAACCATCGATTTTAATCTTAACAGTTTTCGTACTTCTCCTCCTGGTACCAACGGTGATTCCTCACA
ACTACTCGGATGCTCTGCATAAGTCAATCCTATTTTTCGAAGGTCAACGCTCCGGTCGACTTCCCAGACA
ACAAAGGATGTTGTGGCGTGGTGACTCTGCACTCAAGGACGGCGAAAACCTCAACACCGACCTCGTTGGT
GGTTACTACGACGCCGGTGACAACGTTAAGTTTCATTTTCCAATGGCTTTTACGGCCACGATGCTTGCTT
GGAGTTCTATCGACTTCAGTTGTTACATGTCTGACAATGATTTTAGACACAACCTCGTAAATATCAAGTG
GGCTACTGATTATCTCCTTAAGACTGTCTCACAACTCCCTCATCGCATTTTCGTCCAAGTAGGTGAAGCA
CAGCCCGACCATAATTGTTGGGAAAGACCGGAAGATATGGATACGCCACGAACCGCTTTCGCTCTAGATG
CACCAGGGCCAGCCTCCGATCTAGCGGGTGAAATCGCTGCAGCTCTGGCAGCTGCTTCTATCGCATTCAA
ACAATCGAGGCCTACATATTCCAAATTATTGCTCAGCAAAGCCATACAAACGTTTCAGTACGCAGATATG
CATCGAGGTTCTTATGCCGACAATCAGAACGTGCACAACGCCGCTTGCCCTTTCTACTGCAGTAATAATG
GATATAAGGATGAGTTGCTCTGGGGAGCTGCGTGGTTGAGGAGGGCGACTGGTAGTGATAATTACCTAGA
GTACTTGGTGAACAATCGTGAAACTTTCGGTGTAGATTACAATTACTTGGACTTTGGCTGGGACAGCAAA
TTTGGGGGAGTTGATGTTCTCATTGCCAAGGAAGTATTTGAGAAGAATGTGAGTGCGTTAACACCATTTA
AAGATATTGCGGAGAAAATGATGTGTGCAGTATTTCCGGAAACCGCTGGTCTACACATGAGTTACACACC
CGGCGGTCTTCTTTACAAACCCGTTGGCAGCCAGCTCCAGAGCACGGCCGCAATGTCTTTCCTCATCCTT
ACCTACGCGGACTACCTCTCTAAATCCTCTCAACAACTCAGTTGCGGTAACCTCAAGTTTCAACCCGATT
CTCTTCGGCGCATAGTTAAACGACAGGTGGACTACATTTTGGGAGATAATCCAATGCACGTGTCATACAT
GGTTGGGTACGGCGATCAGTACCCGCGACAGGTCCACCACCGTGGCTCGTCTATACCGTCTGTTAAGGTT
CAAAGCACTGCGTTCGGGTGCACACAAGGATGGAATATTTTCCATTCAGACAATCCAAACCCAAACATAT
TAGTAGGAGCGGTGGTTGGCGGGCCTAACGTAGATGATACATTCATTGGAAAACGGACAAATGCTACCGA
CACTGAGCCCACGACGTATATCAATGCACCTCTAGTTGGTGTCTTTGCCTATTTTAATAGCAATCCCAAC
ATCACCTGA
Downstream Sequence
AGTATGTTCGTATAAACAAACCGCTAATGCACCGTCATTTTTTTAAATACCATCTACTGA
CATAACAGTTATAGTATAAAATCTTTTTAATATTTATATGAGTTCCCTATTTATATTCAC
CAGTACACACCAACATCGTTATCAAGAATTTGTTTTTCACCATTTTGTCGTGCGTTGTCG
ACATTTTTAAGAATTTTACAATTGAAAAATAGAGTCGGGATATAAACGGATGAATGGGTA
TACGAGTGTGTAGTTAATATAAATTTGCACTTATCAAGATTTGTAAACATTATATAATAT
GGTTATAATATAGTAGAAAGGAAATCATAGAACTTCAAGGTATGTTGATGATGATGAGAG
AATCAAATTGTATATCATCTCTGAGAGAAGCAATCAATTTCCACTGATTGGTTTGTCCTA
GTTTGTATTATATTTTTCGTAAATCACGGCTTTAAATGAAAAATATATATGGCACACACG
CTAACAATATAAGATTAATATGCTATAGGTAGGTGAAGCACAGCCCGACCATAATTGTTG
GGAAAGACCGGAAGATATGGATACGCCACGAACCGCTTTCGCTCTAGATGCACCAGGGCC
AGCCTCCGATCTAGCGGGTGAAATCGCTGCAGCTCTGGCAGCTGCTTCTATCGCATTCAA
ACAATCGAGGCCTACATATTCCAAATTATTGCTCAGCAAAGCCATACAAACGTTTCAGTA
CGCAGATATGCATCGAGGTTCTTATGCCGACAATCAGAACGTGCACAACGCCGCTTGCCC
TTTCTACTGCAGTAATAATGGATATAAGGTATACACCTTTATTCGAAATTTAATATGTCT
ATAGTACCGGCTTTTTTATATTTTATATATTTCATATAAAATGGTATTGTTTTCATGTAG
GATGAGTTGCTCTGGGGAGCTGCGTGGTTGAGGAGGGCGACTGGTAGTGATAATTACCTA
GAGTACTTGGTGAACAATCGTGAAACTTTCGGTGTAGATTACAATTACTTGGACTTTGGC
TGGGACAGCAAATTTGGGGGAGTTGATGTTCTCATTGCCAAGGTTTGATCCAGCTCTCTC
TCTCTCTATGTATATATAAATATATGATCTTTCAAAGCCACTAGGTCAAATTATATAAAA
GACATAATTAACCATTAATATACTATTAGTGCTTGCTATTTAATTATTTAAACGTCAATT
TGGGTGAACAGGAAGTATTTGAGAAGAATGTGAGTGCGTTAACACCATTTAAAGATATTG
CGGAGAAAATGATGTGTGCAGTATTTCCGGAAACCGCTGGTCTACACATGAGTTACACAC
CCGGCGGTCTTCTTTACAAACCCGTTGGCAGCCAGCTCCAGAGCACGGCCGCAATGTCTT
TCCTCATCCTTACCTACGCGGACTACCTCTCTAAATCCTCTCAACAACTCAGTTGCGGTA
ACCTCAAGTTTCAACCCGATTCTCTTCGGCGCATAGTTAAACGACAGGTACTCAAACATC
ATTTGTTGTTGTGTATATATGCTTTAGATAGGCCCATCAAAGGCATATGCATTTTTTTTT
TGCGGTACATAGGTGGACTACATTTTGGGAGATAATCCAATGCACGTGTCATACATGGTT
GGGTACGGCGATCAGTACCCGCGACAGGTCCACCACCGTGGCTCGTCTATACCGTCTGTT
AAGGTTCAAAGCACTGCGTTCGGGTGCACACAAGGATGGAATATTTTCCATTCAGACAAT
CCAAACCCAAACATATTAGTAGGAGCGGTGGTTGGCGGGCCTAACGTAGATGATACATTC
ATTGGAAAACGGACAAATGCTACCGACACTGAGCCCACGACGTATATCAATGCACCTCTA
GTTGGTGTCTTTGCCTATTTTAATAGCAATCCCAACATCACCTGACTTCAACTTTCTTTT
TCCAAATCTTCAACATTTATAAAGTTATAACAATAAACCATTTTATATAAATCTTGAAAA
TGTCTTGGGGCTACAAATAA
Pro Sequence
MKPSILILTVFVLLLLVPTVIPHNYSDALHKSILFFEGQRSGRLPRQQRM
LWRGDSALKDGENLNTDLVGGYYDAGDNVKFHFPMAFTATMLAWSSIDFS
CYMSDNDFRHNLVNIKWATDYLLKTVSQLPHRIFVQVGEAQPDHNCWERP
EDMDTPRTAFALDAPGPASDLAGEIAAALAAASIAFKQSRPTYSKLLLSK
AIQTFQYADMHRGSYADNQNVHNAACPFYCSNNGYKDELLWGAAWLRRAT
GSDNYLEYLVNNRETFGVDYNYLDFGWDSKFGGVDVLIAKEVFEKNVSAL
TPFKDIAEKMMCAVFPETAGLHMSYTPGGLLYKPVGSQLQSTAAMSFLIL
TYADYLSKSSQQLSCGNLKFQPDSLRRIVKRQVDYILGDNPMHVSYMVGY
GDQYPRQVHHRGSSIPSVKVQSTAFGCTQGWNIFHSDNPNPNILVGAVVG
GPNVDDTFIGKRTNATDTEPTTYINAPLVGVFAYFNSNPNIT
mRNA Sequence
ATGAAACCATCGATTTTAATCTTAACAGTTTTCGTACTTCTCCTCCTGGTACCAACGGTGATTCCTCACA
ACTACTCGGATGCTCTGCATAAGTCAATCCTATTTTTCGAAGGTCAACGCTCCGGTCGACTTCCCAGACA
ACAAAGGATGTTGTGGCGTGGTGACTCTGCACTCAAGGACGGCGAAAACCTCAACACCGACCTCGTTGGT
GGTTACTACGACGCCGGTGACAACGTTAAGTTTCATTTTCCAATGGCTTTTACGGCCACGATGCTTGCTT
GGAGTTCTATCGACTTCAGTTGTTACATGTCTGACAATGATTTTAGACACAACCTCGTAAATATCAAGTG
GGCTACTGATTATCTCCTTAAGACTGTCTCACAACTCCCTCATCGCATTTTCGTCCAAGTAGGTGAAGCA
CAGCCCGACCATAATTGTTGGGAAAGACCGGAAGATATGGATACGCCACGAACCGCTTTCGCTCTAGATG
CACCAGGGCCAGCCTCCGATCTAGCGGGTGAAATCGCTGCAGCTCTGGCAGCTGCTTCTATCGCATTCAA
ACAATCGAGGCCTACATATTCCAAATTATTGCTCAGCAAAGCCATACAAACGTTTCAGTACGCAGATATG
CATCGAGGTTCTTATGCCGACAATCAGAACGTGCACAACGCCGCTTGCCCTTTCTACTGCAGTAATAATG
GATATAAGGATGAGTTGCTCTGGGGAGCTGCGTGGTTGAGGAGGGCGACTGGTAGTGATAATTACCTAGA
GTACTTGGTGAACAATCGTGAAACTTTCGGTGTAGATTACAATTACTTGGACTTTGGCTGGGACAGCAAA
TTTGGGGGAGTTGATGTTCTCATTGCCAAGGAAGTATTTGAGAAGAATGTGAGTGCGTTAACACCATTTA
AAGATATTGCGGAGAAAATGATGTGTGCAGTATTTCCGGAAACCGCTGGTCTACACATGAGTTACACACC
CGGCGGTCTTCTTTACAAACCCGTTGGCAGCCAGCTCCAGAGCACGGCCGCAATGTCTTTCCTCATCCTT
ACCTACGCGGACTACCTCTCTAAATCCTCTCAACAACTCAGTTGCGGTAACCTCAAGTTTCAACCCGATT
CTCTTCGGCGCATAGTTAAACGACAGGTGGACTACATTTTGGGAGATAATCCAATGCACGTGTCATACAT
GGTTGGGTACGGCGATCAGTACCCGCGACAGGTCCACCACCGTGGCTCGTCTATACCGTCTGTTAAGGTT
CAAAGCACTGCGTTCGGGTGCACACAAGGATGGAATATTTTCCATTCAGACAATCCAAACCCAAACATAT
TAGTAGGAGCGGTGGTTGGCGGGCCTAACGTAGATGATACATTCATTGGAAAACGGACAAATGCTACCGA
CACTGAGCCCACGACGTATATCAATGCACCTCTAGTTGGTGTCTTTGCCTATTTTAATAGCAATCCCAAC
ATCACCTGA