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Detail for ZS11_A03G18100.t1

Genome:
ZS11: ZS11_A03G18100.t1
ZS11_v0: BnaA03T0160300ZS
WE: WE_C05G02940.t1
WE_v0: BnaC05T0028900WE
Darmor: A03p18650.1_BnaDAR
BH: BnaA10T031700BH
Quinta: BnaA10T0027400QU
ZS2: BnaC05T027000ZS2
SW: BnaA10T033300SW
Express61: A03p016230.1_BnaEXP
Xiaoyun: BnaA03G0166900XY
P202: BnaA09G059800P202.1
BL: BnaA10T031700BH
TA: BnaC05T026800TA
Da-Ae: Not available
RB: BnaA08T354500RB
No2127: BnaC03T0112000NO
P130: BnaA08G032200P130.1
Length: 86
KOG ID: KOG3300
KOG E-value: 1.830000e-45
KOG Score: 144.0
KOG Annotation: Energy production and conversion; Cell cycle control, cell division, chromosome partitioning
Biological Process: -
Cellular Component: -
Molecular Function: -
KEGG Ortholog: K11353 NDUFA13; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
NR Protein: XP_009133164.1
NR E-value: 4.900000e-44
NR Score: 181.8
NR Annotation: XP_009133164.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B-like [Brassica rapa]
SwissProt Protein: O49313|NDADB_ARATH
SwissProt E-value: 7.760000e-45
SwissProt Score: 144.0
SwissProt Annotation: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana OX=3702 GN=At2g33220 PE=2 SV=1
CDS Sequence (264 bp)
ATGATGATACCAGTTCTAATTAAGATTAGCTGTGGTGATGATAGAGCGTTTAAGGAAGAAAAATACACTG
CGCGGAGAGCTATTCTTCCCATTCTTCAAGCAGAAGAAGATGAAAGGTTTGTGTCTGAGTGGAACAAGTA
TCTAGATTACGAGGCTGATGTGATGAAAGATGTTCCTGGTTGGAAAGTTGGTGAAAACGTGTATAACTCT
GGTCGTTGGATGCCTCCAGCTACTGGAGAGCTTCGTCCTGATGTCTGGTAA
Upstream Sequence
ATGATGATACCAGTTCTAATTAAGATTAGCTGTGGTGATGATAGAGCGTTTAAGGAAGAAAAATACACTG
CGCGGAGAGCTATTCTTCCCATTCTTCAAGCAGAAGAAGATGAAAGGTTTGTGTCTGAGTGGAACAAGTA
TCTAGATTACGAGGCTGATGTGATGAAAGATGTTCCTGGTTGGAAAGTTGGTGAAAACGTGTATAACTCT
GGTCGTTGGATGCCTCCAGCTACTGGAGAGCTTCGTCCTGATGTCTGGTAA
Downstream Sequence
GTTAGTTGGGTTTTGGTTTTTAGGTGGTCGGATTGTGATTTATCAGCTTGACTAGTGTAG
TTTTACAACAACACATGTTATCCTCTGTTGGTCAGCAATTCAGTTTCTTAATGATGACGA
AAATGTTATAATGAGAATAATGTGTCACCAAAAAGGTTCTAATTAAGATTAGCTGTGGTG
ATGATAGAGCGTTTAAGGAAGAAAAATACACTGCGCGGAGAGCTATTCTTCCCATTCTTC
AAGCAGAAGAAGATGAAAGGTATAGCAAAACAAAACCAAAAAAGTTATGTTTCTTGTGGT
ATAGTAGTCAGAGTTCAACTGAACCACATGTGTTTATTTGTAAATAGGTTTGTGTCTGAG
TGGAACAAGTATCTAGATTACGAGGCTGATGTGATGAAAGATGTTCCTGGTTGGAAAGTT
GGTGAAAACGTGTATAACTCTGGTCGTTGGATGCCTCCAGCTACTGGAGAGCTTCGTCCT
GATGTCTGGTAATATATTATCAATGCCTCCTTTTCATGATGATGATGAATATTGTGTAAG
CATTTTAGAACCGTGCTGTGTCTCTTCTTTTTATCTCTTCTTATTCATCATATAATAAGA
GAAATGATACATACACACTTCATGTATTGAGGAACATATTTTTGTTTTATTTCATTCACA
CCTTTCTGTCTCTTTGTCAATAGGAAACTTGGGTTTCTACATAGATAGATTTTGTTCACA
TTATCTAATCAAGTTTTGAAACATCAGTATGTTTTCACATAAAGGTAGCTTATATATATA
ATATGGTAACAAACACATTACCAACAAAATAAATTGATGTCTAAGAGTGGGAAGCCACAT
CTTCCTTACAACCAAAAAATGCAAAATCATACAAATTTAAAAATATGGTAATGCCAATAT
TGTGTGTGAACCCAGTAAGGGTCTCTATCAATATTTCTCCAATAACAAAAGGTTAAAAAA
CCGATTACAAAAAAAATAGTTGTACATAGAGATGTTTCTTGCCACACAAGTAAAATATTG
TCTGCTTTAACCTAACCTCCCTGAAGAGAATGAACACGTAAGAATCAAATCAGGAGAGAC
GTAAGTTCAAGATGCCCTCTGAAACCCCTATTGACGAAACTTGTAGGATTCTACATCGCG
TAAATCTATGCGAGGGAGTAAACGAATACTGTACAATTTCAGTTGTCAGATGAAGAACGG
ACCAAATAGGTCTCAGTCCTTTAGAAAGTGGAAGTTAGGGTTATCAGCGAGTTCGATCGC
TGCCTTTACATTGGTAAATTCCTTTTCTTGCATGCAGTTGGAGATCTCATCTGCTGCAAA
GGGGATGCTGAGTTTCACAAAAACAATTTCATGAGGTGTTATGGTGGTGAATAATGTCTG
AATAACTGCGAGAAATTTACAAGTCGTTAATATTTTTAGTACCTGGAATCATTGTCTAAC
GAGAACGAACGGCTGTCTTCATCTTCATCTGTGATTAGTAGTTTCAAGTTGGAAACCACC
TGCATTGAAAGAAAACATAAATTAGATAATGAAATGATATATTGAGATTTGGAAAAATGT
ATTATGGCATATTCGACAGATGTGAAGAGGAAACATACGTCTGGCGATACGTTCTGATCC
TTGTCGTCATCAATTTTGCAGAGGGTACATATTCTATACAGTTGCTGAGTACTAAGAGCC
TGAGAGATTAAAGAAAGAGATAGATAGAGAGATCAGAATAGGGTGTGAGTATTAGCATTC
TCCAAGCACCTTTCCTTTTCTATTTATCTTGGAAAGGAGAGAGTAGTTACCGGACAGAGG
TTAGTGGTAAGATCATCATATGTAATCGTGGACTTTTGTTCTGTAACCTGGAAGAGGAAT
CAGTTGATATATTCAGGACAGAGAAAGAAGAGAGAGAGTGGTGTACTGTAAATTTAAGTT
TTCTGTAAATTTGGTTCTTAAAAAGAAAAGACAGACCAGGATCCCCACGGCTTGTCTTGT
GTGTTTGAGTTCATCCCATG
Pro Sequence
MMIPVLIKISCGDDRAFKEEKYTARRAILPILQAEEDERFVSEWNKYLDY
EADVMKDVPGWKVGENVYNSGRWMPPATGELRPDVW
mRNA Sequence
ATGATGATACCAGTTCTAATTAAGATTAGCTGTGGTGATGATAGAGCGTTTAAGGAAGAAAAATACACTG
CGCGGAGAGCTATTCTTCCCATTCTTCAAGCAGAAGAAGATGAAAGGTTTGTGTCTGAGTGGAACAAGTA
TCTAGATTACGAGGCTGATGTGATGAAAGATGTTCCTGGTTGGAAAGTTGGTGAAAACGTGTATAACTCT
GGTCGTTGGATGCCTCCAGCTACTGGAGAGCTTCGTCCTGATGTCTGGTAA